From 308c84688e2096e08d8fd97789a7f7a8d13da84d Mon Sep 17 00:00:00 2001
From: Lars Bilke <lars.bilke@ufz.de>
Date: Fri, 15 Sep 2023 11:20:12 +0200
Subject: [PATCH] [ci,guix] --no-substitutes should minimize
'write_to_session_record_port' errors.
---
scripts/ci/jobs/build-guix.yml | 6 +++---
1 file changed, 3 insertions(+), 3 deletions(-)
diff --git a/scripts/ci/jobs/build-guix.yml b/scripts/ci/jobs/build-guix.yml
index 2726765a68b..2b8ab999980 100644
--- a/scripts/ci/jobs/build-guix.yml
+++ b/scripts/ci/jobs/build-guix.yml
@@ -18,7 +18,7 @@ build guix:
- guix describe
# SteadyStateDiffusion only!
- guix build --fallback -L $PWD/.guix/modules ogs-ssd
- - guix build --fallback -L $PWD/.guix/modules --with-input=openmpi=openmpi-pmix --without-tests=hdf5-parallel-openmpi ogs-petsc-ssd
+ - guix build --fallback -L $PWD/.guix/modules ogs-petsc-ssd
deploy guix container eve:
stage: build
@@ -33,7 +33,7 @@ deploy guix container eve:
- which guix
- guix describe
# All processes.
- - image=$( guix pack --fallback -L $PWD/.guix/modules -RR --format=squashfs --with-input=openmpi=openmpi-pmix --without-tests=hdf5-parallel-openmpi bash ogs-petsc | tee | tail -1 )
+ - image=$( guix pack --no-substitutes -L $PWD/.guix/modules -RR --format=squashfs bash ogs-petsc | tee | tail -1 )
- echo "Image $image"
- ssh sonjenk@frontend2.eve.ufz.de rm -f ${GUIX_PETSC_CONTAINER}
- scp $image sonjenk@frontend2.eve.ufz.de:${GUIX_PETSC_CONTAINER}
@@ -50,7 +50,7 @@ test guix container eve:
- mkdir -p $work_dir
- cp -r ${CI_PROJECT_DIR}/Tests/Data/EllipticPETSc $work_dir/
- export prj_file=${work_dir}/EllipticPETSc/cube_1e3_XDMF_np3.prj
- - jid=$(sbatch --chdir=${work_dir} --job-name=test-guix-container --mem-per-cpu=1G --ntasks=3 --output=/work/%u/%x_%j.out --parsable --time=1 --partition=rocky-9 --wrap="srun apptainer exec ${GUIX_PETSC_CONTAINER} ogs ${prj_file}")
+ - jid=$(sbatch --chdir=${work_dir} --job-name=test-guix-container --mem-per-cpu=1G --ntasks=3 --output=/work/%u/%x_%j.out --parsable --time=5 --partition=rocky-9 --wrap="srun apptainer exec ${GUIX_PETSC_CONTAINER} ogs ${prj_file}")
# - touch /work/$USER/ci_log_$jid.out # required on frontend1, tail -F does not recognize file created
- while true; do grep "$jid" < <(squeue -hj "$jid") || break; sleep 10; done &> /dev/null & tail -F /work/$USER/test-guix-container_$jid.out --pid="$!" || true
- exit_code=$(sacct -j $jid.0 --format=ExitCode --noheader | cut -d':' -f1)
--
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