Improve compareParallelResults.py script

model_generation/LF_flux_test_models/compareParallelResults.py

@@ -4,9 +4,9 @@ import os
 import sys
 import pandas as pd
 
-data_path=sys.argv[1]
-meta_data_path = data_path + '/MetaData'
-postprocessed_data_path = data_path + '/PostprocessedData'
+data_base_path=sys.argv[1]
+meta_data_path = data_base_path + '/MetaData'
+postprocessed_data_path = data_base_path + '/PostprocessedData'
 
 ogs_bin_path='/p/project/ogs6hpc4/w/o/br_petsc/bin'
 
@@ -19,19 +19,22 @@ def readExperiments(experiments):
 
 def reorderToOriginalNodesElementsSequence(solver, preconditioner, juwels_id):
     petsc_key = solver.strip().replace(" ", "_") + '_' + preconditioner.strip().replace(" ", "_")
-    submit_script_name = data_path + '/' + petsc_key+'.sh'
+    submit_script_name = data_base_path + '/' + petsc_key+'.sh'
     for (root, dirs, file) in os.walk(submit_script_name):
         for directory in dirs:
-            pvtu_path = submit_script_name + '/' + str(juwels_id) + '/MOD_01_Subsurface3D_IC_ts_853_t_2241684000_000000.pvtu'
-            vtu_path = submit_script_name + '/' + str(juwels_id) + '/MOD_01_Subsurface3D_IC_ts_853_t_2241684000_000000.vtu'
+            data_path = submit_script_name + '/' + str(juwels_id) + '/'
+            pvtu_path = data_path + 'MOD_01_Subsurface3D_IC_ts_853_t_2241684000_000000.pvtu'
+            vtu_name = 'MOD_01_Subsurface3D_IC_ts_853_t_2241684000.000000.vtu'
+            vtu_path = data_path + vtu_name
             # Check if pvtu file exists
             if (os.path.exists(pvtu_path)):
                 print(pvtu_path)
                 # Remove the ghost data: pvtu -> vtu
-                # os.system(ogs_bin_path/ + '/RemoveGhostData -i ' + pvtu_path + ' -o ' + vtu_path)
+                os.system(ogs_bin_path/ + '/RemoveGhostData -i ' + pvtu_path + ' -o ' + vtu_path)
                 # Identify the subdomain based on original ordered mesh
-                # os.system(ogs_bin_path/ + '/identifySubdomains -m ' + vtu_path + ' -f -o x -- ' + vtu_path)
+                os.system(ogs_bin_path/ + '/identifySubdomains -m ' + vtu_path + ' -f -o x -- ' + vtu_path)
                 # Reordering based on bulk ids
+                os.system(ogs_bin_path/ + '/ReorderNodesElements -i ' + data_path + '/x' + vtu_name + ' -o ' + data_path + vtu_name)
             else:
                 print('file ' + pvtu_path + ' does not exist')