diff --git a/BaseLib/Histogram.h b/BaseLib/Histogram.h
index 8ae04be9d180d4896cb4d1eaeb97a417e80652b6..9c889c6911895e623c15170724daf50cd20b40fa 100644
--- a/BaseLib/Histogram.h
+++ b/BaseLib/Histogram.h
@@ -14,7 +14,7 @@
 #include <ostream>
 #include <vector>
 
-namespace BASELIB
+namespace BaseLib
 {
 
 /** Basic Histogram implementation.
@@ -159,6 +159,6 @@ operator<<(std::ostream& os, const Histogram<T>& h)
     return os << std::endl;
 }
 
-}   // namespace BASELIB
+}   // namespace BaseLib
 
 #endif  // BASELIB_HISTOGRAM_H
diff --git a/BaseLib/zlib/CMakeLists.txt b/BaseLib/zlib/CMakeLists.txt
index 93af750c457f534a3ca9373399956c3836a8c726..4152a4e824c42db36e92731e42164aa7296f79e7 100644
--- a/BaseLib/zlib/CMakeLists.txt
+++ b/BaseLib/zlib/CMakeLists.txt
@@ -1,6 +1,6 @@
 cmake_minimum_required(VERSION 2.4.4)
 set(CMAKE_ALLOW_LOOSE_LOOP_CONSTRUCTS ON)
-
+cmake_policy(SET CMP0003 NEW)
 project(zlib C)
 
 set(ZLIB_VERSION "1.2.7")
diff --git a/CMakeLists.txt b/CMakeLists.txt
index 5e3e4d71f367f9b8a17bb334cbfd67a4b8f23322..fd49d63f6a15b10ed518075143a5e43338b721e4 100644
--- a/CMakeLists.txt
+++ b/CMakeLists.txt
@@ -8,6 +8,17 @@ CMAKE_MINIMUM_REQUIRED(VERSION 2.8.3)
 # Project name
 PROJECT( OGS-6 )
 
+###########################################################################
+### OGS version information. Adjust these if you release a new version. ###
+###########################################################################
+SET (OGS_VERSION_MAJOR 0)
+SET (OGS_VERSION_MINOR 0)
+SET (OGS_VERSION_PATCH 1)
+SET (OGS_RELEASE_PERSONS "LB/TF/KR")
+SET (OGS_VERSION "${OGS_VERSION_MAJOR}.${OGS_VERSION_MINOR}.${OGS_VERSION_PATCH}")
+SET (OGS_VERSION_AND_PERSONS "${OGS_VERSION} (${OGS_RELEASE_PERSONS})")
+SET (OGS_DATE "2012-08-20")
+
 ### CMake includes ###
 INCLUDE(scripts/cmake/CheckTypeSizes.cmake)
 INCLUDE(scripts/cmake/FindIncludeHeader.cmake)
@@ -24,17 +35,6 @@ IF(OGS_COVERAGE)
 	INCLUDE(scripts/cmake/Coverage.cmake)
 ENDIF()
 
-###########################################################################
-### OGS version information. Adjust these if you release a new version. ###
-###########################################################################
-SET (OGS_VERSION_MAJOR 0)
-SET (OGS_VERSION_MINOR 0)
-SET (OGS_VERSION_PATCH 1)
-SET (OGS_RELEASE_PERSONS "LB/TF/KR")
-SET (OGS_VERSION "${OGS_VERSION_MAJOR}.${OGS_VERSION_MINOR}.${OGS_VERSION_PATCH}")
-SET (OGS_VERSION_AND_PERSONS "${OGS_VERSION} (${OGS_RELEASE_PERSONS})")
-SET (OGS_DATE "2012-08-20")
-
 ###############
 ### Options ###
 ###############
diff --git a/FileIO/CMakeLists.txt b/FileIO/CMakeLists.txt
index ec8801dd3a398c6c83a6b10a635882bbe17bf8e9..cfb8a2fc207b4f2990146ff9deea7b32d9c92c42 100644
--- a/FileIO/CMakeLists.txt
+++ b/FileIO/CMakeLists.txt
@@ -10,7 +10,8 @@ SET( SOURCES
 )
 GET_SOURCE_FILES(SOURCES_LEGACY Legacy)
 GET_SOURCE_FILES(SOURCES_MESHIO MeshIO)
-SET ( SOURCES ${SOURCES} ${SOURCES_LEGACY} ${SOURCES_MESHIO})
+GET_SOURCE_FILES(SOURCES_RAPID_XML RapidXmlIO)
+SET ( SOURCES ${SOURCES} ${SOURCES_LEGACY} ${SOURCES_MESHIO} ${SOURCES_RAPID_XML})
 
 IF (QT4_FOUND)
 	GET_SOURCE_FILES(SOURCES_XML XmlIO)
diff --git a/FileIO/XmlIO/RapidXMLInterface.cpp b/FileIO/RapidXmlIO/RapidStnInterface.cpp
similarity index 93%
rename from FileIO/XmlIO/RapidXMLInterface.cpp
rename to FileIO/RapidXmlIO/RapidStnInterface.cpp
index 4e30244ff8ac3da55306828a9eff489706f964d3..9b4d9dc3b3d42f3a09194890a56f36312e95a962 100644
--- a/FileIO/XmlIO/RapidXMLInterface.cpp
+++ b/FileIO/RapidXmlIO/RapidStnInterface.cpp
@@ -4,12 +4,12 @@
  *              See accompanying file LICENSE.txt or
  *              http://www.opengeosys.net/LICENSE.txt
  *
- * \file RapidXMLInterface.cpp
+ * \file RapidStnInterface.cpp
  *
  *  Created on 2012-08-16 by Karsten Rink
  */
 //RapidXML
-#include "RapidXMLInterface.h"
+#include "RapidStnInterface.h"
 #include <iostream>
 
 #include "StringTools.h"
@@ -18,7 +18,7 @@
 namespace FileIO
 {
 
-std::vector<GeoLib::Point*> *RapidXMLInterface::readStationFile(const std::string &fileName)
+std::vector<GeoLib::Point*> *RapidStnInterface::readStationFile(const std::string &fileName)
 {
 	std::vector<GeoLib::Point*> *stations = new std::vector<GeoLib::Point*>;
 	std::ifstream in(fileName.c_str());
@@ -58,9 +58,9 @@ std::vector<GeoLib::Point*> *RapidXMLInterface::readStationFile(const std::strin
 		{
 			std::string b(list_item->name());
 			if (std::string(list_item->name()).compare("stations") == 0)
-				RapidXMLInterface::readStations(list_item, stations, fileName);
+				RapidStnInterface::readStations(list_item, stations, fileName);
 			if (std::string(list_item->name()).compare("boreholes") == 0)
-				RapidXMLInterface::readStations(list_item, stations, fileName);
+				RapidStnInterface::readStations(list_item, stations, fileName);
 		}
 	}
 
@@ -70,7 +70,7 @@ std::vector<GeoLib::Point*> *RapidXMLInterface::readStationFile(const std::strin
 	return stations;
 }
 /*
-int RapidXMLInterface::rapidReadFile(const std::string &fileName)
+int RapidStnInterface::rapidReadFile(const std::string &fileName)
 {
 	GEOLIB::GEOObjects* geoObjects = _project->getGEOObjects();
 
@@ -129,7 +129,7 @@ int RapidXMLInterface::rapidReadFile(const std::string &fileName)
 	return 1;
 }
 */
-void RapidXMLInterface::readStations(const rapidxml::xml_node<>* station_root, std::vector<GeoLib::Point*> *stations, const std::string &file_name)
+void RapidStnInterface::readStations(const rapidxml::xml_node<>* station_root, std::vector<GeoLib::Point*> *stations, const std::string &file_name)
 {
 	for (rapidxml::xml_node<>* station_node = station_root->first_node(); station_node; station_node = station_node->next_sibling())
 	{
@@ -179,7 +179,7 @@ void RapidXMLInterface::readStations(const rapidxml::xml_node<>* station_root, s
 				s->setStationValue(station_value);
 
 				if (station_node->first_node("strat"))
-					RapidXMLInterface::readStratigraphy(station_node->first_node("strat"), s);
+					RapidStnInterface::readStratigraphy(station_node->first_node("strat"), s);
 
 				stations->push_back(s);
 
@@ -190,7 +190,7 @@ void RapidXMLInterface::readStations(const rapidxml::xml_node<>* station_root, s
 	}
 }
 
-void RapidXMLInterface::readStratigraphy( const rapidxml::xml_node<>* strat_root, GeoLib::StationBorehole* borehole )
+void RapidStnInterface::readStratigraphy( const rapidxml::xml_node<>* strat_root, GeoLib::StationBorehole* borehole )
 {
 	double depth_check((*borehole)[2]);
 
diff --git a/FileIO/XmlIO/RapidXMLInterface.h b/FileIO/RapidXmlIO/RapidStnInterface.h
similarity index 96%
rename from FileIO/XmlIO/RapidXMLInterface.h
rename to FileIO/RapidXmlIO/RapidStnInterface.h
index 0ba9cd598e6e12a7525cba4733d715dbf59052ab..ba8dc7be19defe5dbbb7853eb898c5835468b5c6 100644
--- a/FileIO/XmlIO/RapidXMLInterface.h
+++ b/FileIO/RapidXmlIO/RapidStnInterface.h
@@ -4,7 +4,7 @@
  *              See accompanying file LICENSE.txt or
  *              http://www.opengeosys.net/LICENSE.txt
  *
- * \file RapidXMLInterface.h
+ * \file RapidStnInterface.h
  *
  *  Created on 2012-08-16 by Karsten Rink
  */
@@ -27,7 +27,7 @@ namespace FileIO
 /**
  * \brief Base class for writing any information to and from XML files.
  */
-class RapidXMLInterface
+class RapidStnInterface
 {
 public:
 	/// Reads an xml-file using the RapidXML parser integrated in the source code (i.e. this function is usable without Qt)
diff --git a/FileIO/XmlIO/VTKInterface.cpp b/FileIO/RapidXmlIO/RapidVtuInterface.cpp
similarity index 87%
rename from FileIO/XmlIO/VTKInterface.cpp
rename to FileIO/RapidXmlIO/RapidVtuInterface.cpp
index df5c7b631020b0e3198cce04de91b7cccfa1b724..f7c257d6da8b3e0c29aac6f5299ada1ce648ba4a 100644
--- a/FileIO/XmlIO/VTKInterface.cpp
+++ b/FileIO/RapidXmlIO/RapidVtuInterface.cpp
@@ -4,12 +4,12 @@
  *              See accompanying file LICENSE.txt or
  *              http://www.opengeosys.net/LICENSE.txt
  *
- * \file VTKInterface.cpp
+ * \file RapidVtuInterface.cpp
  *
  *  Created on 2012-08-30 by Karsten Rink
  */
 
-#include "VTKInterface.h"
+#include "RapidVtuInterface.h"
 #include <iostream>
 #include <fstream>
 
@@ -33,23 +33,23 @@ namespace FileIO {
 
 using namespace rapidxml;
 
-VTKInterface::VTKInterface()
+RapidVtuInterface::RapidVtuInterface()
 : _export_name(""), _mesh(NULL), _doc(new xml_document<>), _use_compressor(false)
 {
 }
 
-VTKInterface::~VTKInterface()
+RapidVtuInterface::~RapidVtuInterface()
 {
 	delete _doc;
 }
 
-MeshLib::Mesh* VTKInterface::readVTUFile(const std::string &file_name)
+MeshLib::Mesh* RapidVtuInterface::readVTUFile(const std::string &file_name)
 {
 	std::cout << "Reading OGS mesh ... " << std::endl;
 	std::ifstream in(file_name.c_str());
 	if (in.fail())
 	{
-		std::cout << "\nVTKInterface::readVTUFile() - Can't open xml-file." << std::endl;
+		std::cout << "\nRapidVtuInterface::readVTUFile() - Can't open xml-file." << std::endl;
 		return NULL;
 	}
 
@@ -80,7 +80,7 @@ MeshLib::Mesh* VTKInterface::readVTUFile(const std::string &file_name)
 			}
 			else
 			{
-				std::cout << "VTKInterface::readVTUFile() - Unknown compression method." << std::endl;
+				std::cout << "RapidVtuInterface::readVTUFile() - Unknown compression method." << std::endl;
 				return NULL;
 			}
 		}
@@ -109,7 +109,7 @@ MeshLib::Mesh* VTKInterface::readVTUFile(const std::string &file_name)
 				}
 			}
 			else
-				std::cout << "Warning in VTKInterface::readVTUFile() - MaterialID array not found." << std::endl;
+				std::cout << "Warning in RapidVtuInterface::readVTUFile() - MaterialID array not found." << std::endl;
 
 
 			const rapidxml::xml_node<>* points_node (piece_node->first_node("Points")->first_node("DataArray"));
@@ -130,7 +130,7 @@ MeshLib::Mesh* VTKInterface::readVTUFile(const std::string &file_name)
 			}
 			else
 			{
-				std::cout << "Error in VTKInterface::readVTUFile() - Points array not found." << std::endl;
+				std::cout << "Error in RapidVtuInterface::readVTUFile() - Points array not found." << std::endl;
 				return NULL;
 			}
 
@@ -169,7 +169,7 @@ MeshLib::Mesh* VTKInterface::readVTUFile(const std::string &file_name)
 			}
 			else
 			{
-				std::cout << "Error in VTKInterface::readVTUFile() - Cell data not found." << std::endl;
+				std::cout << "Error in RapidVtuInterface::readVTUFile() - Cell data not found." << std::endl;
 				return NULL;
 			}
 
@@ -180,7 +180,7 @@ MeshLib::Mesh* VTKInterface::readVTUFile(const std::string &file_name)
 			return new MeshLib::Mesh(BaseLib::getFileNameFromPath(file_name), nodes, elements);
 		}
 		else {
-			std::cout << "Error in VTKInterface::readVTUFile() - Number of nodes and elements not specified." << std::endl;
+			std::cout << "Error in RapidVtuInterface::readVTUFile() - Number of nodes and elements not specified." << std::endl;
 			delete [] buffer;
 		}
 	}
@@ -188,7 +188,7 @@ MeshLib::Mesh* VTKInterface::readVTUFile(const std::string &file_name)
 	return NULL;
 }
 
-MeshLib::Element* VTKInterface::readElement(std::stringstream &iss, const std::vector<MeshLib::Node*> &nodes, unsigned material, unsigned type)
+MeshLib::Element* RapidVtuInterface::readElement(std::stringstream &iss, const std::vector<MeshLib::Node*> &nodes, unsigned material, unsigned type)
 {
 	unsigned node_ids[8];
 	switch (type)
@@ -275,44 +275,44 @@ MeshLib::Element* VTKInterface::readElement(std::stringstream &iss, const std::v
 		break;
 	}
 	default:
-		std::cout << "Error in VTKInterface::readElement() - Unknown mesh element type \"" << type << "\" ..." << std::endl;
+		std::cout << "Error in RapidVtuInterface::readElement() - Unknown mesh element type \"" << type << "\" ..." << std::endl;
 		return NULL;
 	}
 
 }
 
-bool VTKInterface::isVTKFile(const rapidxml::xml_node<>* vtk_root)
+bool RapidVtuInterface::isVTKFile(const rapidxml::xml_node<>* vtk_root)
 {
 	if (vtk_root == NULL || std::string(vtk_root->name()).compare("VTKFile"))
 	{
-		std::cout << "Error in VTKInterface::readVTUFile() - Not a VTK File." << std::endl;
+		std::cout << "Error in RapidVtuInterface::readVTUFile() - Not a VTK File." << std::endl;
 		return false;
 	}
 	if (std::string(vtk_root->first_attribute("version")->value()).compare("0.1"))
 	{
-		std::cout << "Error in VTKInterface::readVTUFile() - Unsupported file format version." << std::endl;
+		std::cout << "Error in RapidVtuInterface::readVTUFile() - Unsupported file format version." << std::endl;
 		return false;
 	}
 	if (std::string(vtk_root->first_attribute("byte_order")->value()).compare("LittleEndian"))
 	{
-		std::cout << "Error in VTKInterface::readVTUFile() - Only little endian files are supported." << std::endl;
+		std::cout << "Error in RapidVtuInterface::readVTUFile() - Only little endian files are supported." << std::endl;
 		return false;
 	}
 	return true;
 }
 
-bool VTKInterface::isVTKUnstructuredGrid(const rapidxml::xml_node<>* vtk_root)
+bool RapidVtuInterface::isVTKUnstructuredGrid(const rapidxml::xml_node<>* vtk_root)
 {
 	if (isVTKFile(vtk_root))
 	{
 		if (std::string(vtk_root->first_node()->name()).compare("UnstructuredGrid") == 0)
 			return true;
-		std::cout << "Error in VTKInterface::readVTUFile() - Not an unstructured grid." << std::endl;
+		std::cout << "Error in RapidVtuInterface::readVTUFile() - Not an unstructured grid." << std::endl;
 	}
 	return false;
 }
 
-unsigned char* VTKInterface::uncompressData(const rapidxml::xml_node<>* node)
+unsigned char* RapidVtuInterface::uncompressData(const rapidxml::xml_node<>* node)
 {
 	rapidxml::xml_node<>* data_node = node->first_node("AppendedData");
 	char* compressed_data (NULL);
@@ -324,7 +324,7 @@ unsigned char* VTKInterface::uncompressData(const rapidxml::xml_node<>* node)
 
 
 
-int VTKInterface::write(std::ostream& stream)
+int RapidVtuInterface::write(std::ostream& stream)
 {
 	//if (this->_export_name.empty())
 	if (!_mesh)
@@ -423,7 +423,7 @@ int VTKInterface::write(std::ostream& stream)
 	return 1;
 }
 
-unsigned VTKInterface::getVTKElementID(MshElemType::type type) const
+unsigned RapidVtuInterface::getVTKElementID(MshElemType::type type) const
 {
 	switch (type)
 	{
@@ -446,7 +446,7 @@ unsigned VTKInterface::getVTKElementID(MshElemType::type type) const
 	}
 }
 
-xml_node<>* VTKInterface::addDataArray(const std::string &name, const std::string &data_type, const std::string &data, unsigned nComponents)
+xml_node<>* RapidVtuInterface::addDataArray(const std::string &name, const std::string &data_type, const std::string &data, unsigned nComponents)
 {
 
 	xml_attribute<> *attr (NULL);
diff --git a/FileIO/XmlIO/VTKInterface.h b/FileIO/RapidXmlIO/RapidVtuInterface.h
similarity index 96%
rename from FileIO/XmlIO/VTKInterface.h
rename to FileIO/RapidXmlIO/RapidVtuInterface.h
index 6127937d16561d54d60f343c86be79ce205cf244..5a341a4405ee9783c1423d05aaf89336bb7db4f7 100644
--- a/FileIO/XmlIO/VTKInterface.h
+++ b/FileIO/RapidXmlIO/RapidVtuInterface.h
@@ -38,11 +38,11 @@ namespace FileIO
  * of copies of strings, i.e. strings used in the DOM tree need to be available as long the DOM tree
  * is needed.
  */
-class VTKInterface : public Writer
+class RapidVtuInterface : public Writer
 {
 public:
-	VTKInterface();
-	~VTKInterface();
+	RapidVtuInterface();
+	~RapidVtuInterface();
 
 	/// Read an unstructured grid from a VTU file
 	static MeshLib::Mesh* readVTUFile(const std::string &file_name);
@@ -58,7 +58,7 @@ protected:
 	rapidxml::xml_node<>* addDataArray(const std::string &name, const std::string &data_type, const std::string &data, unsigned nComponents = 1);
 
 	int write(std::ostream& stream);
-	
+
 	std::string _export_name;
 	MeshLib::Mesh* _mesh;
 	rapidxml::xml_document<> *_doc;
diff --git a/FileIO/readMeshFromFile.cpp b/FileIO/readMeshFromFile.cpp
index a5027db1ad15f7d65536162e15e68c7549e10a5f..ad817c8a210bb12aeb2902d24f53addb014d23c4 100644
--- a/FileIO/readMeshFromFile.cpp
+++ b/FileIO/readMeshFromFile.cpp
@@ -13,7 +13,7 @@
 #include "readMeshFromFile.h"
 #include "StringTools.h"
 #include "Mesh.h"
-#include "XmlIO/VTKInterface.h"
+#include "RapidXmlIO/RapidVtuInterface.h"
 #include "Legacy/MeshIO.h"
 
 namespace FileIO {
@@ -29,7 +29,7 @@ MeshLib::Mesh* readMeshFromFile(const std::string &file_name)
 		mesh = meshIO.loadMeshFromFile(file_name);
 	}
 	else if (suffix.compare("vtu") == 0 || suffix.compare("VTU") == 0)
-		mesh = FileIO::VTKInterface::readVTUFile(file_name);
+		mesh = FileIO::RapidVtuInterface::readVTUFile(file_name);
 	else
 		std::cout << "Unknown mesh file format" << std::endl;
 
diff --git a/Gui/DataView/DataView.cpp b/Gui/DataView/DataView.cpp
index 60342a3a436731a5a4ac40536d893b9cb576751d..d60a4d7e59f1b8b2e985e57f8a8658b22772387c 100644
--- a/Gui/DataView/DataView.cpp
+++ b/Gui/DataView/DataView.cpp
@@ -26,7 +26,7 @@
 #include <QSettings>
 
 #include "Legacy/MeshIO.h"
-#include "XmlIO/VTKInterface.h"
+#include "RapidXmlIO/RapidVtuInterface.h"
 #include "Writer.h" // necessary to avoid Linker Error in Windows
 
 DataView::DataView( QWidget* parent /*= 0*/ )
@@ -140,7 +140,7 @@ int DataView::writeMeshToFile() const
 			QFileInfo fi(fileName);
 			if (fi.suffix().toLower() == "vtu")
 			{
-				FileIO::VTKInterface vtkIO;
+				FileIO::RapidVtuInterface vtkIO;
 				vtkIO.setMesh(mesh);
 				vtkIO.writeToFile(fileName.toStdString().c_str());
 			}
diff --git a/Gui/VtkVis/VtkVisPipeline.cpp b/Gui/VtkVis/VtkVisPipeline.cpp
index c3b0819353f61fc162d12b8138cb1a2a5acac3e9..e9a42d86e58c23c97787cc24f9308637a76f35ab 100644
--- a/Gui/VtkVis/VtkVisPipeline.cpp
+++ b/Gui/VtkVis/VtkVisPipeline.cpp
@@ -526,7 +526,7 @@ void VtkVisPipeline::checkMeshQuality(VtkMeshSource* source, MshQualityType::typ
 //			size_t size (static_cast<size_t>(QInputDialog::getInt(NULL, "OGS-Histogram", "number of histogram classes/spins (min: 1, max: 10000)", static_cast<int>(nclasses), 1, 10000, 1, &ok)));
 //			if (ok) ...
 
-		BASELIB::Histogram<double> histogram (checker->getHistogram(nclasses));
+		BaseLib::Histogram<double> histogram (checker->getHistogram(nclasses));
 		std::ofstream out ("mesh_histogram.txt");
 		if (out) {
 			out << "# histogram depicts mesh quality criterion " << MshQualityType2String(t)
diff --git a/Gui/mainwindow.cpp b/Gui/mainwindow.cpp
index 4ba7fe73bee7cfb1e4f69fc3cfbbaa69b17b9626..f3b39a758f004702224ec247920614169f8699ec 100644
--- a/Gui/mainwindow.cpp
+++ b/Gui/mainwindow.cpp
@@ -63,7 +63,7 @@
 #include "MeshIO/GMSHInterface.h"
 #include "MeshIO/TetGenInterface.h"
 #include "PetrelInterface.h"
-#include "XmlIO/VTKInterface.h"
+#include "RapidXmlIO/RapidVtuInterface.h"
 #include "XmlIO/XmlCndInterface.h"
 #include "XmlIO/XmlGmlInterface.h"
 #include "XmlIO/XmlGspInterface.h"
diff --git a/MeshLib/MeshQuality/MeshQualityChecker.cpp b/MeshLib/MeshQuality/MeshQualityChecker.cpp
index 2c6c88694da1626234876121db81c43a11d1a261..83fad02943f17e26d7cdbe5b0db4fb56d7cdbc56 100644
--- a/MeshLib/MeshQuality/MeshQualityChecker.cpp
+++ b/MeshLib/MeshQuality/MeshQualityChecker.cpp
@@ -24,14 +24,14 @@ MeshQualityChecker::MeshQualityChecker(Mesh const* const mesh) :
 		_mesh_quality_measure.resize (_mesh->getNElements(), -1.0);
 }
 
-BASELIB::Histogram<double> MeshQualityChecker::getHistogram (size_t nclasses) const
+BaseLib::Histogram<double> MeshQualityChecker::getHistogram (size_t nclasses) const
 {
 	if (nclasses == 0) {
 		// simple suggestion: number of classes with Sturges criterion
 		nclasses = static_cast<size_t>(1 + 3.3 * log (static_cast<float>((_mesh->getNElements()))));
 	}
 
-	return BASELIB::Histogram<double>(getMeshQuality(), nclasses, true);
+	return BaseLib::Histogram<double>(getMeshQuality(), nclasses, true);
 }
 
 void MeshQualityChecker::errorMsg (const Element* elem, size_t idx) const
diff --git a/MeshLib/MeshQuality/MeshQualityChecker.h b/MeshLib/MeshQuality/MeshQualityChecker.h
index 66e9c0dce28ad1935fd3900c12d963ce99c1a2fb..e4cbcaa27ec9e66d1f05094585f61784891ab99e 100644
--- a/MeshLib/MeshQuality/MeshQualityChecker.h
+++ b/MeshLib/MeshQuality/MeshQualityChecker.h
@@ -36,7 +36,7 @@ public:
 	std::vector<double> const& getMeshQuality () const;
 	double getMinValue() const;
 	double getMaxValue() const;
-	virtual BASELIB::Histogram<double> getHistogram (std::size_t nclasses = 0) const;
+	virtual BaseLib::Histogram<double> getHistogram (std::size_t nclasses = 0) const;
 
 protected:
 	void errorMsg (const Element* elem, std::size_t idx) const;
diff --git a/README.md b/README.md
index c68f6f79df791a807d11e7d1af182835f426ad36..63a9eced130c61d9a12d269c474f42b44120b0e2 100644
--- a/README.md
+++ b/README.md
@@ -27,5 +27,5 @@ publications. See the [LICENSE.txt][license-source] for the license text.
 [ogs]: http://www.opengeosys.com
 [devguide]: http://ufz.github.com/devguide
 [jenkins-ci]: https://svn.ufz.de/hudson/job/OGS-6/
-[docs]: https://svn.ufz.de/hudson/view/OGS-6/job/OGS-6-Docs/lastSuccessfulBuild/artifact/build/docs/index.html
+[docs]: https://svn.ufz.de/hudson/job/OGS-6/job/Docs/lastSuccessfulBuild/artifact/build/docs/index.html
 [license-source]: https://github.com/ufz/ogs/blob/master/LICENSE.txt
diff --git a/SimpleTests/MeshTests/CMakeLists.txt b/SimpleTests/MeshTests/CMakeLists.txt
index 50a0aa50cd68e5be5dbaa0f356d91a42805d8f89..f266d6e6e49289862b71f3542d86c4869f35af98 100644
--- a/SimpleTests/MeshTests/CMakeLists.txt
+++ b/SimpleTests/MeshTests/CMakeLists.txt
@@ -12,26 +12,22 @@ INCLUDE_DIRECTORIES(
 	${CMAKE_SOURCE_DIR}/MeshLib/
 )
 
-IF(VTK_FOUND)
-	INCLUDE( ${VTK_USE_FILE} )
-
-	# Create the executable
-	ADD_EXECUTABLE( MeshRead
-	        MeshRead.cpp
-        	${SOURCES}
-	        ${HEADERS}
-	)
+# Create the executable
+ADD_EXECUTABLE( MeshRead
+        MeshRead.cpp
+        ${SOURCES}
+        ${HEADERS}
+)
 
-	TARGET_LINK_LIBRARIES ( MeshRead
-		MeshLib
-		FileIO
-		MathLib
-		BaseLib
-		GeoLib
-		logog
-		${ADDITIONAL_LIBS}
-	)
-ENDIF()
+TARGET_LINK_LIBRARIES ( MeshRead
+	MeshLib
+	FileIO
+	MathLib
+	BaseLib
+	GeoLib
+	logog
+	${ADDITIONAL_LIBS}
+)
 
 # Create CollapseMeshNodes executable
 ADD_EXECUTABLE( CollapseMeshNodes
diff --git a/SimpleTests/MeshTests/MeshRead.cpp b/SimpleTests/MeshTests/MeshRead.cpp
index bb0bcf2e3097d5dd5ac623335c3177d8a555b652..dc14c0fac49158fd10b1891c8806b64a03aaa7d4 100644
--- a/SimpleTests/MeshTests/MeshRead.cpp
+++ b/SimpleTests/MeshTests/MeshRead.cpp
@@ -15,7 +15,7 @@
 #include "logog.hpp"
 
 // FileIO
-#include "XmlIO/VTKInterface.h"
+#include "RapidXmlIO/RapidVtuInterface.h"
 #include "Legacy/MeshIO.h"
 
 // MeshLib
@@ -57,7 +57,7 @@ int main(int argc, char *argv[])
 	if (BaseLib::getSuffixFromPath(fname).compare("msh") == 0) {
 		mesh = mesh_io.loadMeshFromFile(fname);
 	} else {
-		mesh = FileIO::VTKInterface::readVTUFile(fname);
+		mesh = FileIO::RapidVtuInterface::readVTUFile(fname);
 	}
 #ifndef WIN32
 	unsigned long mem_with_mesh (mem_watch.getVirtMemUsage());
diff --git a/scripts/docs/Doxyfile.in b/scripts/docs/Doxyfile.in
index 02bd7fb7931b0fe84e3d3066d8a4d95f5955d27e..aa1990dae95f50adfe6ee4b2ecd193e3cc3776b2 100644
--- a/scripts/docs/Doxyfile.in
+++ b/scripts/docs/Doxyfile.in
@@ -1,14 +1,14 @@
-# Doxyfile 1.5.8
+# Doxyfile 1.8.2
 
 # This file describes the settings to be used by the documentation system
-# doxygen (www.doxygen.org) for a project
+# doxygen (www.doxygen.org) for a project.
 #
-# All text after a hash (#) is considered a comment and will be ignored
+# All text after a hash (#) is considered a comment and will be ignored.
 # The format is:
 #       TAG = value [value, ...]
 # For lists items can also be appended using:
 #       TAG += value [value, ...]
-# Values that contain spaces should be placed between quotes (" ")
+# Values that contain spaces should be placed between quotes (" ").
 
 #---------------------------------------------------------------------------
 # Project related configuration options
@@ -22,10 +22,11 @@
 
 DOXYFILE_ENCODING      = UTF-8
 
-# The PROJECT_NAME tag is a single word (or a sequence of words surrounded
-# by quotes) that should identify the project.
+# The PROJECT_NAME tag is a single word (or sequence of words) that should
+# identify the project. Note that if you do not use Doxywizard you need
+# to put quotes around the project name if it contains spaces.
 
-PROJECT_NAME           = "OpenGeoSys-6 source code documentation"
+PROJECT_NAME           = "OGS"
 
 # The PROJECT_NUMBER tag can be used to enter a project or revision number.
 # This could be handy for archiving the generated documentation or
@@ -33,6 +34,19 @@ PROJECT_NAME           = "OpenGeoSys-6 source code documentation"
 
 PROJECT_NUMBER         = ${OGS_VERSION}
 
+# Using the PROJECT_BRIEF tag one can provide an optional one line description
+# for a project that appears at the top of each page and should give viewer
+# a quick idea about the purpose of the project. Keep the description short.
+
+PROJECT_BRIEF          = "Source code documentation"
+
+# With the PROJECT_LOGO tag one can specify an logo or icon that is
+# included in the documentation. The maximum height of the logo should not
+# exceed 55 pixels and the maximum width should not exceed 200 pixels.
+# Doxygen will copy the logo to the output directory.
+
+PROJECT_LOGO           = ${PROJECT_SOURCE_DIR}/scripts/docs/OpenGeoSys-Logo.png
+
 # The OUTPUT_DIRECTORY tag is used to specify the (relative or absolute)
 # base path where the generated documentation will be put.
 # If a relative path is entered, it will be relative to the location
@@ -54,11 +68,11 @@ CREATE_SUBDIRS         = YES
 # information to generate all constant output in the proper language.
 # The default language is English, other supported languages are:
 # Afrikaans, Arabic, Brazilian, Catalan, Chinese, Chinese-Traditional,
-# Croatian, Czech, Danish, Dutch, Farsi, Finnish, French, German, Greek,
-# Hungarian, Italian, Japanese, Japanese-en (Japanese with English messages),
-# Korean, Korean-en, Lithuanian, Norwegian, Macedonian, Persian, Polish,
-# Portuguese, Romanian, Russian, Serbian, Serbian-Cyrilic, Slovak, Slovene,
-# Spanish, Swedish, and Ukrainian.
+# Croatian, Czech, Danish, Dutch, Esperanto, Farsi, Finnish, French, German,
+# Greek, Hungarian, Italian, Japanese, Japanese-en (Japanese with English
+# messages), Korean, Korean-en, Lithuanian, Norwegian, Macedonian, Persian,
+# Polish, Portuguese, Romanian, Russian, Serbian, Serbian-Cyrillic, Slovak,
+# Slovene, Spanish, Swedish, Ukrainian, and Vietnamese.
 
 OUTPUT_LANGUAGE        = English
 
@@ -122,7 +136,9 @@ FULL_PATH_NAMES        = YES
 # only done if one of the specified strings matches the left-hand part of
 # the path. The tag can be used to show relative paths in the file list.
 # If left blank the directory from which doxygen is run is used as the
-# path to strip.
+# path to strip. Note that you specify absolute paths here, but also
+# relative paths, which will be relative from the directory where doxygen is
+# started.
 
 STRIP_FROM_PATH        = ${CMAKE_SOURCE_DIR}
 
@@ -136,7 +152,7 @@ STRIP_FROM_PATH        = ${CMAKE_SOURCE_DIR}
 STRIP_FROM_INC_PATH    =
 
 # If the SHORT_NAMES tag is set to YES, doxygen will generate much shorter
-# (but less readable) file names. This can be useful is your file systems
+# (but less readable) file names. This can be useful if your file system
 # doesn't support long names like on DOS, Mac, or CD-ROM.
 
 SHORT_NAMES            = NO
@@ -191,6 +207,13 @@ TAB_SIZE               = 4
 
 ALIASES                =
 
+# This tag can be used to specify a number of word-keyword mappings (TCL only).
+# A mapping has the form "name=value". For example adding
+# "class=itcl::class" will allow you to use the command class in the
+# itcl::class meaning.
+
+TCL_SUBST              =
+
 # Set the OPTIMIZE_OUTPUT_FOR_C tag to YES if your project consists of C
 # sources only. Doxygen will then generate output that is more tailored for C.
 # For instance, some of the names that are used will be different. The list
@@ -217,22 +240,40 @@ OPTIMIZE_FOR_FORTRAN   = NO
 
 OPTIMIZE_OUTPUT_VHDL   = NO
 
-# Doxygen selects the parser to use depending on the extension of the files it parses.
-# With this tag you can assign which parser to use for a given extension.
-# Doxygen has a built-in mapping, but you can override or extend it using this tag.
-# The format is ext=language, where ext is a file extension, and language is one of
-# the parsers supported by doxygen: IDL, Java, Javascript, C#, C, C++, D, PHP,
-# Objective-C, Python, Fortran, VHDL, C, C++. For instance to make doxygen treat
-# .inc files as Fortran files (default is PHP), and .f files as C (default is Fortran),
-# use: inc=Fortran f=C
+# Doxygen selects the parser to use depending on the extension of the files it
+# parses. With this tag you can assign which parser to use for a given
+# extension. Doxygen has a built-in mapping, but you can override or extend it
+# using this tag. The format is ext=language, where ext is a file extension,
+# and language is one of the parsers supported by doxygen: IDL, Java,
+# Javascript, CSharp, C, C++, D, PHP, Objective-C, Python, Fortran, VHDL, C,
+# C++. For instance to make doxygen treat .inc files as Fortran files (default
+# is PHP), and .f files as C (default is Fortran), use: inc=Fortran f=C. Note
+# that for custom extensions you also need to set FILE_PATTERNS otherwise the
+# files are not read by doxygen.
 
 EXTENSION_MAPPING      =
 
+# If MARKDOWN_SUPPORT is enabled (the default) then doxygen pre-processes all
+# comments according to the Markdown format, which allows for more readable
+# documentation. See http://daringfireball.net/projects/markdown/ for details.
+# The output of markdown processing is further processed by doxygen, so you
+# can mix doxygen, HTML, and XML commands with Markdown formatting.
+# Disable only in case of backward compatibilities issues.
+
+MARKDOWN_SUPPORT       = YES
+
+# When enabled doxygen tries to link words that correspond to documented classes,
+# or namespaces to their corresponding documentation. Such a link can be
+# prevented in individual cases by by putting a % sign in front of the word or
+# globally by setting AUTOLINK_SUPPORT to NO.
+
+AUTOLINK_SUPPORT       = YES
+
 # If you use STL classes (i.e. std::string, std::vector, etc.) but do not want
 # to include (a tag file for) the STL sources as input, then you should
 # set this tag to YES in order to let doxygen match functions declarations and
 # definitions whose arguments contain STL classes (e.g. func(std::string); v.s.
-# func(std::string) {}). This also make the inheritance and collaboration
+# func(std::string) {}). This also makes the inheritance and collaboration
 # diagrams that involve STL classes more complete and accurate.
 
 BUILTIN_STL_SUPPORT    = YES
@@ -248,12 +289,7 @@ CPP_CLI_SUPPORT        = NO
 
 SIP_SUPPORT            = NO
 
-# For Microsoft's IDL there are propget and propput attributes to indicate getter
-# and setter methods for a property. Setting this option to YES (the default)
-# will make doxygen to replace the get and set methods by a property in the
-# documentation. This will only work if the methods are indeed getting or
-# setting a simple type. If this is not the case, or you want to show the
-# methods anyway, you should set this option to NO.
+# For Microsoft's IDL there are propget and propput attributes to indicate getter and setter methods for a property. Setting this option to YES (the default) will make doxygen replace the get and set methods by a property in the documentation. This will only work if the methods are indeed getting or setting a simple type. If this is not the case, or you want to show the methods anyway, you should set this option to NO.
 
 IDL_PROPERTY_SUPPORT   = YES
 
@@ -272,6 +308,22 @@ DISTRIBUTE_GROUP_DOC   = NO
 
 SUBGROUPING            = YES
 
+# When the INLINE_GROUPED_CLASSES tag is set to YES, classes, structs and
+# unions are shown inside the group in which they are included (e.g. using
+# @ingroup) instead of on a separate page (for HTML and Man pages) or
+# section (for LaTeX and RTF).
+
+INLINE_GROUPED_CLASSES = NO
+
+# When the INLINE_SIMPLE_STRUCTS tag is set to YES, structs, classes, and
+# unions with only public data fields will be shown inline in the documentation
+# of the scope in which they are defined (i.e. file, namespace, or group
+# documentation), provided this scope is documented. If set to NO (the default),
+# structs, classes, and unions are shown on a separate page (for HTML and Man
+# pages) or section (for LaTeX and RTF).
+
+INLINE_SIMPLE_STRUCTS  = NO
+
 # When TYPEDEF_HIDES_STRUCT is enabled, a typedef of a struct, union, or enum
 # is documented as struct, union, or enum with the name of the typedef. So
 # typedef struct TypeS {} TypeT, will appear in the documentation as a struct
@@ -288,16 +340,27 @@ TYPEDEF_HIDES_STRUCT   = NO
 # For small to medium size projects (<1000 input files) the default value is
 # probably good enough. For larger projects a too small cache size can cause
 # doxygen to be busy swapping symbols to and from disk most of the time
-# causing a significant performance penality.
+# causing a significant performance penalty.
 # If the system has enough physical memory increasing the cache will improve the
 # performance by keeping more symbols in memory. Note that the value works on
-# a logarithmic scale so increasing the size by one will rougly double the
+# a logarithmic scale so increasing the size by one will roughly double the
 # memory usage. The cache size is given by this formula:
 # 2^(16+SYMBOL_CACHE_SIZE). The valid range is 0..9, the default is 0,
-# corresponding to a cache size of 2^16 = 65536 symbols
+# corresponding to a cache size of 2^16 = 65536 symbols.
 
 SYMBOL_CACHE_SIZE      = 0
 
+# Similar to the SYMBOL_CACHE_SIZE the size of the symbol lookup cache can be
+# set using LOOKUP_CACHE_SIZE. This cache is used to resolve symbols given
+# their name and scope. Since this can be an expensive process and often the
+# same symbol appear multiple times in the code, doxygen keeps a cache of
+# pre-resolved symbols. If the cache is too small doxygen will become slower.
+# If the cache is too large, memory is wasted. The cache size is given by this
+# formula: 2^(16+LOOKUP_CACHE_SIZE). The valid range is 0..9, the default is 0,
+# corresponding to a cache size of 2^16 = 65536 symbols.
+
+LOOKUP_CACHE_SIZE      = 0
+
 #---------------------------------------------------------------------------
 # Build related configuration options
 #---------------------------------------------------------------------------
@@ -314,6 +377,11 @@ EXTRACT_ALL            = YES
 
 EXTRACT_PRIVATE        = YES
 
+# If the EXTRACT_PACKAGE tag is set to YES all members with package or internal
+# scope will be included in the documentation.
+
+EXTRACT_PACKAGE        = NO
+
 # If the EXTRACT_STATIC tag is set to YES all static members of a file
 # will be included in the documentation.
 
@@ -336,7 +404,7 @@ EXTRACT_LOCAL_METHODS  = NO
 # extracted and appear in the documentation as a namespace called
 # 'anonymous_namespace{file}', where file will be replaced with the base
 # name of the file that contains the anonymous namespace. By default
-# anonymous namespace are hidden.
+# anonymous namespaces are hidden.
 
 EXTRACT_ANON_NSPACES   = NO
 
@@ -396,6 +464,12 @@ HIDE_SCOPE_NAMES       = NO
 
 SHOW_INCLUDE_FILES     = YES
 
+# If the FORCE_LOCAL_INCLUDES tag is set to YES then Doxygen
+# will list include files with double quotes in the documentation
+# rather than with sharp brackets.
+
+FORCE_LOCAL_INCLUDES   = NO
+
 # If the INLINE_INFO tag is set to YES (the default) then a tag [inline]
 # is inserted in the documentation for inline members.
 
@@ -415,6 +489,16 @@ SORT_MEMBER_DOCS       = YES
 
 SORT_BRIEF_DOCS        = NO
 
+# If the SORT_MEMBERS_CTORS_1ST tag is set to YES then doxygen
+# will sort the (brief and detailed) documentation of class members so that
+# constructors and destructors are listed first. If set to NO (the default)
+# the constructors will appear in the respective orders defined by
+# SORT_MEMBER_DOCS and SORT_BRIEF_DOCS.
+# This tag will be ignored for brief docs if SORT_BRIEF_DOCS is set to NO
+# and ignored for detailed docs if SORT_MEMBER_DOCS is set to NO.
+
+SORT_MEMBERS_CTORS_1ST = NO
+
 # If the SORT_GROUP_NAMES tag is set to YES then doxygen will sort the
 # hierarchy of group names into alphabetical order. If set to NO (the default)
 # the group names will appear in their defined order.
@@ -431,6 +515,15 @@ SORT_GROUP_NAMES       = NO
 
 SORT_BY_SCOPE_NAME     = YES
 
+# If the STRICT_PROTO_MATCHING option is enabled and doxygen fails to
+# do proper type resolution of all parameters of a function it will reject a
+# match between the prototype and the implementation of a member function even
+# if there is only one candidate or it is obvious which candidate to choose
+# by doing a simple string match. By disabling STRICT_PROTO_MATCHING doxygen
+# will still accept a match between prototype and implementation in such cases.
+
+STRICT_PROTO_MATCHING  = NO
+
 # The GENERATE_TODOLIST tag can be used to enable (YES) or
 # disable (NO) the todo list. This list is created by putting \todo
 # commands in the documentation.
@@ -461,10 +554,10 @@ GENERATE_DEPRECATEDLIST= YES
 ENABLED_SECTIONS       =
 
 # The MAX_INITIALIZER_LINES tag determines the maximum number of lines
-# the initial value of a variable or define consists of for it to appear in
+# the initial value of a variable or macro consists of for it to appear in
 # the documentation. If the initializer consists of more lines than specified
 # here it will be hidden. Use a value of 0 to hide initializers completely.
-# The appearance of the initializer of individual variables and defines in the
+# The appearance of the initializer of individual variables and macros in the
 # documentation can be controlled using \showinitializer or \hideinitializer
 # command in the documentation regardless of this setting.
 
@@ -483,7 +576,8 @@ SHOW_USED_FILES        = YES
 SHOW_FILES             = YES
 
 # Set the SHOW_NAMESPACES tag to NO to disable the generation of the
-# Namespaces page.  This will remove the Namespaces entry from the Quick Index
+# Namespaces page.
+# This will remove the Namespaces entry from the Quick Index
 # and from the Folder Tree View (if specified). The default is YES.
 
 SHOW_NAMESPACES        = YES
@@ -498,15 +592,25 @@ SHOW_NAMESPACES        = YES
 
 FILE_VERSION_FILTER    =
 
-# The LAYOUT_FILE tag can be used to specify a layout file which will be parsed by
-# doxygen. The layout file controls the global structure of the generated output files
-# in an output format independent way. The create the layout file that represents
-# doxygen's defaults, run doxygen with the -l option. You can optionally specify a
-# file name after the option, if omitted DoxygenLayout.xml will be used as the name
-# of the layout file.
+# The LAYOUT_FILE tag can be used to specify a layout file which will be parsed
+# by doxygen. The layout file controls the global structure of the generated
+# output files in an output format independent way. To create the layout file
+# that represents doxygen's defaults, run doxygen with the -l option.
+# You can optionally specify a file name after the option, if omitted
+# DoxygenLayout.xml will be used as the name of the layout file.
 
 LAYOUT_FILE            = ${CMAKE_SOURCE_DIR}/scripts/docs/DoxygenLayout.xml
 
+# The CITE_BIB_FILES tag can be used to specify one or more bib files
+# containing the references data. This must be a list of .bib files. The
+# .bib extension is automatically appended if omitted. Using this command
+# requires the bibtex tool to be installed. See also
+# http://en.wikipedia.org/wiki/BibTeX for more info. For LaTeX the style
+# of the bibliography can be controlled using LATEX_BIB_STYLE. To use this
+# feature you need bibtex and perl available in the search path.
+
+CITE_BIB_FILES         =
+
 #---------------------------------------------------------------------------
 # configuration options related to warning and progress messages
 #---------------------------------------------------------------------------
@@ -535,7 +639,7 @@ WARN_IF_UNDOCUMENTED   = YES
 
 WARN_IF_DOC_ERROR      = YES
 
-# This WARN_NO_PARAMDOC option can be abled to get warnings for
+# The WARN_NO_PARAMDOC option can be enabled to get warnings for
 # functions that are documented, but have no documentation for their parameters
 # or return value. If set to NO (the default) doxygen will only warn about
 # wrong or incomplete parameter documentation, but not about the absence of
@@ -588,10 +692,13 @@ INPUT_ENCODING         = UTF-8
 # FILE_PATTERNS tag to specify one or more wildcard pattern (like *.cpp
 # and *.h) to filter out the source-files in the directories. If left
 # blank the following patterns are tested:
-# *.c *.cc *.cxx *.cpp *.c++ *.java *.ii *.ixx *.ipp *.i++ *.inl *.h *.hh *.hxx
-# *.hpp *.h++ *.idl *.odl *.cs *.php *.php3 *.inc *.m *.mm *.py *.f90
+# *.c *.cc *.cxx *.cpp *.c++ *.d *.java *.ii *.ixx *.ipp *.i++ *.inl *.h *.hh
+# *.hxx *.hpp *.h++ *.idl *.odl *.cs *.php *.php3 *.inc *.m *.mm *.dox *.py
+# *.f90 *.f *.for *.vhd *.vhdl
 
-FILE_PATTERNS          = *.h *.cpp *.dox
+FILE_PATTERNS          = *.h \
+                         *.cpp \
+                         *.dox
 
 # The RECURSIVE tag can be used to turn specify whether or not subdirectories
 # should be searched for input files as well. Possible values are YES and NO.
@@ -599,15 +706,17 @@ FILE_PATTERNS          = *.h *.cpp *.dox
 
 RECURSIVE              = YES
 
-# The EXCLUDE tag can be used to specify files and/or directories that should
+# The EXCLUDE tag can be used to specify files and/or directories that should be
 # excluded from the INPUT source files. This way you can easily exclude a
 # subdirectory from a directory tree whose root is specified with the INPUT tag.
+# Note that relative paths are relative to the directory from which doxygen is
+# run.
 
 EXCLUDE                = ${CMAKE_SOURCE_DIR}/BaseLib/logog \
                          ${CMAKE_SOURCE_DIR}/BaseLib/tclap
 
-# The EXCLUDE_SYMLINKS tag can be used select whether or not files or
-# directories that are symbolic links (a Unix filesystem feature) are excluded
+# The EXCLUDE_SYMLINKS tag can be used to select whether or not files or
+# directories that are symbolic links (a Unix file system feature) are excluded
 # from the input.
 
 EXCLUDE_SYMLINKS       = NO
@@ -661,17 +770,20 @@ IMAGE_PATH             =
 # by executing (via popen()) the command <filter> <input-file>, where <filter>
 # is the value of the INPUT_FILTER tag, and <input-file> is the name of an
 # input file. Doxygen will then use the output that the filter program writes
-# to standard output.  If FILTER_PATTERNS is specified, this tag will be
+# to standard output.
+# If FILTER_PATTERNS is specified, this tag will be
 # ignored.
 
 INPUT_FILTER           =
 
 # The FILTER_PATTERNS tag can be used to specify filters on a per file pattern
-# basis.  Doxygen will compare the file name with each pattern and apply the
-# filter if there is a match.  The filters are a list of the form:
+# basis.
+# Doxygen will compare the file name with each pattern and apply the
+# filter if there is a match.
+# The filters are a list of the form:
 # pattern=filter (like *.cpp=my_cpp_filter). See INPUT_FILTER for further
-# info on how filters are used. If FILTER_PATTERNS is empty, INPUT_FILTER
-# is applied to all files.
+# info on how filters are used. If FILTER_PATTERNS is empty or if
+# non of the patterns match the file name, INPUT_FILTER is applied.
 
 FILTER_PATTERNS        =
 
@@ -681,6 +793,14 @@ FILTER_PATTERNS        =
 
 FILTER_SOURCE_FILES    = NO
 
+# The FILTER_SOURCE_PATTERNS tag can be used to specify source filters per file
+# pattern. A pattern will override the setting for FILTER_PATTERN (if any)
+# and it is also possible to disable source filtering for a specific pattern
+# using *.ext= (so without naming a filter). This option only has effect when
+# FILTER_SOURCE_FILES is enabled.
+
+FILTER_SOURCE_PATTERNS =
+
 #---------------------------------------------------------------------------
 # configuration options related to source browsing
 #---------------------------------------------------------------------------
@@ -699,7 +819,7 @@ INLINE_SOURCES         = NO
 
 # Setting the STRIP_CODE_COMMENTS tag to YES (the default) will instruct
 # doxygen to hide any special comment blocks from generated source code
-# fragments. Normal C and C++ comments will always remain visible.
+# fragments. Normal C, C++ and Fortran comments will always remain visible.
 
 STRIP_CODE_COMMENTS    = YES
 
@@ -718,7 +838,8 @@ REFERENCES_RELATION    = NO
 # If the REFERENCES_LINK_SOURCE tag is set to YES (the default)
 # and SOURCE_BROWSER tag is set to YES, then the hyperlinks from
 # functions in REFERENCES_RELATION and REFERENCED_BY_RELATION lists will
-# link to the source code.  Otherwise they will link to the documentation.
+# link to the source code.
+# Otherwise they will link to the documentation.
 
 REFERENCES_LINK_SOURCE = YES
 
@@ -782,7 +903,14 @@ HTML_FILE_EXTENSION    = .html
 
 # The HTML_HEADER tag can be used to specify a personal HTML header for
 # each generated HTML page. If it is left blank doxygen will generate a
-# standard header.
+# standard header. Note that when using a custom header you are responsible
+#  for the proper inclusion of any scripts and style sheets that doxygen
+# needs, which is dependent on the configuration options used.
+# It is advised to generate a default header using "doxygen -w html
+# header.html footer.html stylesheet.css YourConfigFile" and then modify
+# that header. Note that the header is subject to change so you typically
+# have to redo this when upgrading to a newer version of doxygen or when
+# changing the value of configuration settings such as GENERATE_TREEVIEW!
 
 HTML_HEADER            =
 
@@ -794,21 +922,80 @@ HTML_FOOTER            =
 
 # The HTML_STYLESHEET tag can be used to specify a user-defined cascading
 # style sheet that is used by each HTML page. It can be used to
-# fine-tune the look of the HTML output. If the tag is left blank doxygen
-# will generate a default style sheet. Note that doxygen will try to copy
-# the style sheet file to the HTML output directory, so don't put your own
-# stylesheet in the HTML output directory as well, or it will be erased!
+# fine-tune the look of the HTML output. If left blank doxygen will
+# generate a default style sheet. Note that it is recommended to use
+# HTML_EXTRA_STYLESHEET instead of this one, as it is more robust and this
+# tag will in the future become obsolete.
 
 HTML_STYLESHEET        = ${CMAKE_SOURCE_DIR}/scripts/docs/doxygen.css
 
+# The HTML_EXTRA_STYLESHEET tag can be used to specify an additional
+# user-defined cascading style sheet that is included after the standard
+# style sheets created by doxygen. Using this option one can overrule
+# certain style aspects. This is preferred over using HTML_STYLESHEET
+# since it does not replace the standard style sheet and is therefor more
+# robust against future updates. Doxygen will copy the style sheet file to
+# the output directory.
+
+HTML_EXTRA_STYLESHEET  =
+
+# The HTML_EXTRA_FILES tag can be used to specify one or more extra images or
+# other source files which should be copied to the HTML output directory. Note
+# that these files will be copied to the base HTML output directory. Use the
+# $relpath$ marker in the HTML_HEADER and/or HTML_FOOTER files to load these
+# files. In the HTML_STYLESHEET file, use the file name only. Also note that
+# the files will be copied as-is; there are no commands or markers available.
+
+HTML_EXTRA_FILES       =
+
+# The HTML_COLORSTYLE_HUE tag controls the color of the HTML output.
+# Doxygen will adjust the colors in the style sheet and background images
+# according to this color. Hue is specified as an angle on a colorwheel,
+# see http://en.wikipedia.org/wiki/Hue for more information.
+# For instance the value 0 represents red, 60 is yellow, 120 is green,
+# 180 is cyan, 240 is blue, 300 purple, and 360 is red again.
+# The allowed range is 0 to 359.
+
+HTML_COLORSTYLE_HUE    = 220
+
+# The HTML_COLORSTYLE_SAT tag controls the purity (or saturation) of
+# the colors in the HTML output. For a value of 0 the output will use
+# grayscales only. A value of 255 will produce the most vivid colors.
+
+HTML_COLORSTYLE_SAT    = 100
+
+# The HTML_COLORSTYLE_GAMMA tag controls the gamma correction applied to
+# the luminance component of the colors in the HTML output. Values below
+# 100 gradually make the output lighter, whereas values above 100 make
+# the output darker. The value divided by 100 is the actual gamma applied,
+# so 80 represents a gamma of 0.8, The value 220 represents a gamma of 2.2,
+# and 100 does not change the gamma.
+
+HTML_COLORSTYLE_GAMMA  = 80
+
+# If the HTML_TIMESTAMP tag is set to YES then the footer of each generated HTML
+# page will contain the date and time when the page was generated. Setting
+# this to NO can help when comparing the output of multiple runs.
+
+HTML_TIMESTAMP         = YES
+
 # If the HTML_DYNAMIC_SECTIONS tag is set to YES then the generated HTML
 # documentation will contain sections that can be hidden and shown after the
-# page has loaded. For this to work a browser that supports
-# JavaScript and DHTML is required (for instance Mozilla 1.0+, Firefox
-# Netscape 6.0+, Internet explorer 5.0+, Konqueror, or Safari).
+# page has loaded.
 
 HTML_DYNAMIC_SECTIONS  = NO
 
+# With HTML_INDEX_NUM_ENTRIES one can control the preferred number of
+# entries shown in the various tree structured indices initially; the user
+# can expand and collapse entries dynamically later on. Doxygen will expand
+# the tree to such a level that at most the specified number of entries are
+# visible (unless a fully collapsed tree already exceeds this amount).
+# So setting the number of entries 1 will produce a full collapsed tree by
+# default. 0 is a special value representing an infinite number of entries
+# and will result in a full expanded tree by default.
+
+HTML_INDEX_NUM_ENTRIES = 100
+
 # If the GENERATE_DOCSET tag is set to YES, additional index files
 # will be generated that can be used as input for Apple's Xcode 3
 # integrated development environment, introduced with OSX 10.5 (Leopard).
@@ -817,7 +1004,8 @@ HTML_DYNAMIC_SECTIONS  = NO
 # directory and running "make install" will install the docset in
 # ~/Library/Developer/Shared/Documentation/DocSets so that Xcode will find
 # it at startup.
-# See http://developer.apple.com/tools/creatingdocsetswithdoxygen.html for more information.
+# See http://developer.apple.com/tools/creatingdocsetswithdoxygen.html
+# for more information.
 
 GENERATE_DOCSET        = ${DOCS_GENERATE_DOCSET_STRING}
 
@@ -835,6 +1023,16 @@ DOCSET_FEEDNAME        = "Doxygen generated docs"
 
 DOCSET_BUNDLE_ID       = org.doxygen.Project
 
+# When GENERATE_PUBLISHER_ID tag specifies a string that should uniquely
+# identify the documentation publisher. This should be a reverse domain-name
+# style string, e.g. com.mycompany.MyDocSet.documentation.
+
+DOCSET_PUBLISHER_ID    = org.doxygen.Publisher
+
+# The GENERATE_PUBLISHER_NAME tag identifies the documentation publisher.
+
+DOCSET_PUBLISHER_NAME  = Publisher
+
 # If the GENERATE_HTMLHELP tag is set to YES, additional index files
 # will be generated that can be used as input for tools like the
 # Microsoft HTML help workshop to generate a compiled HTML help file (.chm)
@@ -879,10 +1077,10 @@ BINARY_TOC             = NO
 
 TOC_EXPAND             = NO
 
-# If the GENERATE_QHP tag is set to YES and both QHP_NAMESPACE and QHP_VIRTUAL_FOLDER
-# are set, an additional index file will be generated that can be used as input for
-# Qt's qhelpgenerator to generate a Qt Compressed Help (.qch) of the generated
-# HTML documentation.
+# If the GENERATE_QHP tag is set to YES and both QHP_NAMESPACE and
+# QHP_VIRTUAL_FOLDER are set, an additional index file will be generated
+# that can be used as input for Qt's qhelpgenerator to generate a
+# Qt Compressed Help (.qch) of the generated HTML documentation.
 
 GENERATE_QHP           = NO
 
@@ -904,20 +1102,24 @@ QHP_NAMESPACE          =
 
 QHP_VIRTUAL_FOLDER     = doc
 
-# If QHP_CUST_FILTER_NAME is set, it specifies the name of a custom filter to add.
-# For more information please see
+# If QHP_CUST_FILTER_NAME is set, it specifies the name of a custom filter to
+# add. For more information please see
 # http://doc.trolltech.com/qthelpproject.html#custom-filters
 
 QHP_CUST_FILTER_NAME   =
 
-# The QHP_CUST_FILT_ATTRS tag specifies the list of the attributes of the custom filter to add.For more information please see
-# <a href="http://doc.trolltech.com/qthelpproject.html#custom-filters">Qt Help Project / Custom Filters</a>.
+# The QHP_CUST_FILT_ATTRS tag specifies the list of the attributes of the
+# custom filter to add. For more information please see
+# <a href="http://doc.trolltech.com/qthelpproject.html#custom-filters">
+# Qt Help Project / Custom Filters</a>.
 
 QHP_CUST_FILTER_ATTRS  =
 
-# The QHP_SECT_FILTER_ATTRS tag specifies the list of the attributes this project's
+# The QHP_SECT_FILTER_ATTRS tag specifies the list of the attributes this
+# project's
 # filter section matches.
-# <a href="http://doc.trolltech.com/qthelpproject.html#filter-attributes">Qt Help Project / Filter Attributes</a>.
+# <a href="http://doc.trolltech.com/qthelpproject.html#filter-attributes">
+# Qt Help Project / Filter Attributes</a>.
 
 QHP_SECT_FILTER_ATTRS  =
 
@@ -928,40 +1130,61 @@ QHP_SECT_FILTER_ATTRS  =
 
 QHG_LOCATION           =
 
-# The DISABLE_INDEX tag can be used to turn on/off the condensed index at
-# top of each HTML page. The value NO (the default) enables the index and
-# the value YES disables it.
+# If the GENERATE_ECLIPSEHELP tag is set to YES, additional index files
+#  will be generated, which together with the HTML files, form an Eclipse help
+# plugin. To install this plugin and make it available under the help contents
+# menu in Eclipse, the contents of the directory containing the HTML and XML
+# files needs to be copied into the plugins directory of eclipse. The name of
+# the directory within the plugins directory should be the same as
+# the ECLIPSE_DOC_ID value. After copying Eclipse needs to be restarted before
+# the help appears.
 
-DISABLE_INDEX          = ${DOCS_DISABLE_INDEX_STRING}
+GENERATE_ECLIPSEHELP   = NO
 
-# This tag can be used to set the number of enum values (range [1..20])
-# that doxygen will group on one line in the generated HTML documentation.
+# A unique identifier for the eclipse help plugin. When installing the plugin
+# the directory name containing the HTML and XML files should also have
+# this name.
 
-ENUM_VALUES_PER_LINE   = 4
+ECLIPSE_DOC_ID         = org.doxygen.Project
+
+# The DISABLE_INDEX tag can be used to turn on/off the condensed index (tabs)
+# at top of each HTML page. The value NO (the default) enables the index and
+# the value YES disables it. Since the tabs have the same information as the
+# navigation tree you can set this option to NO if you already set
+# GENERATE_TREEVIEW to YES.
+
+DISABLE_INDEX          = ${DOCS_DISABLE_INDEX_STRING}
 
 # The GENERATE_TREEVIEW tag is used to specify whether a tree-like index
 # structure should be generated to display hierarchical information.
-# If the tag value is set to FRAME, a side panel will be generated
+# If the tag value is set to YES, a side panel will be generated
 # containing a tree-like index structure (just like the one that
 # is generated for HTML Help). For this to work a browser that supports
-# JavaScript, DHTML, CSS and frames is required (for instance Mozilla 1.0+,
-# Netscape 6.0+, Internet explorer 5.0+, or Konqueror). Windows users are
-# probably better off using the HTML help feature. Other possible values
-# for this tag are: HIERARCHIES, which will generate the Groups, Directories,
-# and Class Hierarchy pages using a tree view instead of an ordered list;
-# ALL, which combines the behavior of FRAME and HIERARCHIES; and NONE, which
-# disables this behavior completely. For backwards compatibility with previous
-# releases of Doxygen, the values YES and NO are equivalent to FRAME and NONE
-# respectively.
+# JavaScript, DHTML, CSS and frames is required (i.e. any modern browser).
+# Windows users are probably better off using the HTML help feature.
+# Since the tree basically has the same information as the tab index you
+# could consider to set DISABLE_INDEX to NO when enabling this option.
 
 GENERATE_TREEVIEW      = ${DOCS_GENERATE_TREEVIEW_STRING}
 
+# The ENUM_VALUES_PER_LINE tag can be used to set the number of enum values
+# (range [0,1..20]) that doxygen will group on one line in the generated HTML
+# documentation. Note that a value of 0 will completely suppress the enum
+# values from appearing in the overview section.
+
+ENUM_VALUES_PER_LINE   = 4
+
 # If the treeview is enabled (see GENERATE_TREEVIEW) then this tag can be
 # used to set the initial width (in pixels) of the frame in which the tree
 # is shown.
 
 TREEVIEW_WIDTH         = 250
 
+# When the EXT_LINKS_IN_WINDOW option is set to YES doxygen will open
+# links to external symbols imported via tag files in a separate window.
+
+EXT_LINKS_IN_WINDOW    = NO
+
 # Use this tag to change the font size of Latex formulas included
 # as images in the HTML documentation. The default is 10. Note that
 # when you change the font size after a successful doxygen run you need
@@ -970,15 +1193,60 @@ TREEVIEW_WIDTH         = 250
 
 FORMULA_FONTSIZE       = 10
 
+# Use the FORMULA_TRANPARENT tag to determine whether or not the images
+# generated for formulas are transparent PNGs. Transparent PNGs are
+# not supported properly for IE 6.0, but are supported on all modern browsers.
+# Note that when changing this option you need to delete any form_*.png files
+# in the HTML output before the changes have effect.
+
+FORMULA_TRANSPARENT    = YES
+
 # Enable the USE_MATHJAX option to render LaTeX formulas using MathJax
 # (see http://www.mathjax.org) which uses client side Javascript for the
 # rendering instead of using prerendered bitmaps. Use this if you do not
 # have LaTeX installed or if you want to formulas look prettier in the HTML
-# output. When enabled you also need to install MathJax separately and
+# output. When enabled you may also need to install MathJax separately and
 # configure the path to it using the MATHJAX_RELPATH option.
 
 USE_MATHJAX            = YES
 
+# When MathJax is enabled you need to specify the location relative to the
+# HTML output directory using the MATHJAX_RELPATH option. The destination
+# directory should contain the MathJax.js script. For instance, if the mathjax
+# directory is located at the same level as the HTML output directory, then
+# MATHJAX_RELPATH should be ../mathjax. The default value points to
+# the MathJax Content Delivery Network so you can quickly see the result without
+# installing MathJax.
+# However, it is strongly recommended to install a local
+# copy of MathJax from http://www.mathjax.org before deployment.
+
+MATHJAX_RELPATH        = http://cdn.mathjax.org/mathjax/latest
+
+# The MATHJAX_EXTENSIONS tag can be used to specify one or MathJax extension
+# names that should be enabled during MathJax rendering.
+
+MATHJAX_EXTENSIONS     =
+
+# When the SEARCHENGINE tag is enabled doxygen will generate a search box
+# for the HTML output. The underlying search engine uses javascript
+# and DHTML and should work on any modern browser. Note that when using
+# HTML help (GENERATE_HTMLHELP), Qt help (GENERATE_QHP), or docsets
+# (GENERATE_DOCSET) there is already a search function so this one should
+# typically be disabled. For large projects the javascript based search engine
+# can be slow, then enabling SERVER_BASED_SEARCH may provide a better solution.
+
+SEARCHENGINE           = YES
+
+# When the SERVER_BASED_SEARCH tag is enabled the search engine will be
+# implemented using a PHP enabled web server instead of at the web client
+# using Javascript. Doxygen will generate the search PHP script and index
+# file to put on the web server. The advantage of the server
+# based approach is that it scales better to large projects and allows
+# full text search. The disadvantages are that it is more difficult to setup
+# and does not have live searching capabilities.
+
+SERVER_BASED_SEARCH    = NO
+
 #---------------------------------------------------------------------------
 # configuration options related to the LaTeX output
 #---------------------------------------------------------------------------
@@ -996,6 +1264,9 @@ LATEX_OUTPUT           = latex
 
 # The LATEX_CMD_NAME tag can be used to specify the LaTeX command name to be
 # invoked. If left blank `latex' will be used as the default command name.
+# Note that when enabling USE_PDFLATEX this option is only used for
+# generating bitmaps for formulas in the HTML output, but not in the
+# Makefile that is written to the output directory.
 
 LATEX_CMD_NAME         = latex
 
@@ -1012,7 +1283,7 @@ MAKEINDEX_CMD_NAME     = makeindex
 COMPACT_LATEX          = NO
 
 # The PAPER_TYPE tag can be used to set the paper type that is used
-# by the printer. Possible values are: a4, a4wide, letter, legal and
+# by the printer. Possible values are: a4, letter, legal and
 # executive. If left blank a4wide will be used.
 
 PAPER_TYPE             = a4wide
@@ -1029,6 +1300,13 @@ EXTRA_PACKAGES         =
 
 LATEX_HEADER           =
 
+# The LATEX_FOOTER tag can be used to specify a personal LaTeX footer for
+# the generated latex document. The footer should contain everything after
+# the last chapter. If it is left blank doxygen will generate a
+# standard footer. Notice: only use this tag if you know what you are doing!
+
+LATEX_FOOTER           =
+
 # If the PDF_HYPERLINKS tag is set to YES, the LaTeX that is generated
 # is prepared for conversion to pdf (using ps2pdf). The pdf file will
 # contain links (just like the HTML output) instead of page references
@@ -1055,6 +1333,19 @@ LATEX_BATCHMODE        = NO
 
 LATEX_HIDE_INDICES     = NO
 
+# If LATEX_SOURCE_CODE is set to YES then doxygen will include
+# source code with syntax highlighting in the LaTeX output.
+# Note that which sources are shown also depends on other settings
+# such as SOURCE_BROWSER.
+
+LATEX_SOURCE_CODE      = NO
+
+# The LATEX_BIB_STYLE tag can be used to specify the style to use for the
+# bibliography, e.g. plainnat, or ieeetr. The default style is "plain". See
+# http://en.wikipedia.org/wiki/BibTeX for more info.
+
+LATEX_BIB_STYLE        = plain
+
 #---------------------------------------------------------------------------
 # configuration options related to the RTF output
 #---------------------------------------------------------------------------
@@ -1086,7 +1377,7 @@ COMPACT_RTF            = NO
 
 RTF_HYPERLINKS         = NO
 
-# Load stylesheet definitions from file. Syntax is similar to doxygen's
+# Load style sheet definitions from file. Syntax is similar to doxygen's
 # config file, i.e. a series of assignments. You only have to provide
 # replacements, missing definitions are set to their default value.
 
@@ -1191,8 +1482,10 @@ GENERATE_PERLMOD       = NO
 PERLMOD_LATEX          = NO
 
 # If the PERLMOD_PRETTY tag is set to YES the Perl module output will be
-# nicely formatted so it can be parsed by a human reader.  This is useful
-# if you want to understand what is going on.  On the other hand, if this
+# nicely formatted so it can be parsed by a human reader.
+# This is useful
+# if you want to understand what is going on.
+# On the other hand, if this
 # tag is set to NO the size of the Perl module output will be much smaller
 # and Perl will parse it just the same.
 
@@ -1229,7 +1522,7 @@ MACRO_EXPANSION        = NO
 EXPAND_ONLY_PREDEF     = NO
 
 # If the SEARCH_INCLUDES tag is set to YES (the default) the includes files
-# in the INCLUDE_PATH (see below) will be search if a #include is found.
+# pointed to by INCLUDE_PATH will be searched when a #include is found.
 
 SEARCH_INCLUDES        = YES
 
@@ -1259,15 +1552,15 @@ PREDEFINED             =
 # If the MACRO_EXPANSION and EXPAND_ONLY_PREDEF tags are set to YES then
 # this tag can be used to specify a list of macro names that should be expanded.
 # The macro definition that is found in the sources will be used.
-# Use the PREDEFINED tag if you want to use a different macro definition.
+# Use the PREDEFINED tag if you want to use a different macro definition that
+# overrules the definition found in the source code.
 
 EXPAND_AS_DEFINED      =
 
 # If the SKIP_FUNCTION_MACROS tag is set to YES (the default) then
-# doxygen's preprocessor will remove all function-like macros that are alone
-# on a line, have an all uppercase name, and do not end with a semicolon. Such
-# function macros are typically used for boiler-plate code, and will confuse
-# the parser if not removed.
+# doxygen's preprocessor will remove all references to function-like macros
+# that are alone on a line, have an all uppercase name, and do not end with a
+# semicolon, because these will confuse the parser if not removed.
 
 SKIP_FUNCTION_MACROS   = YES
 
@@ -1275,20 +1568,18 @@ SKIP_FUNCTION_MACROS   = YES
 # Configuration::additions related to external references
 #---------------------------------------------------------------------------
 
-# The TAGFILES option can be used to specify one or more tagfiles.
-# Optionally an initial location of the external documentation
-# can be added for each tagfile. The format of a tag file without
-# this location is as follows:
-#   TAGFILES = file1 file2 ...
+# The TAGFILES option can be used to specify one or more tagfiles. For each
+# tag file the location of the external documentation should be added. The
+# format of a tag file without this location is as follows:
+#
+# TAGFILES = file1 file2 ...
 # Adding location for the tag files is done as follows:
-#   TAGFILES = file1=loc1 "file2 = loc2" ...
-# where "loc1" and "loc2" can be relative or absolute paths or
-# URLs. If a location is present for each tag, the installdox tool
-# does not have to be run to correct the links.
-# Note that each tag file must have a unique name
-# (where the name does NOT include the path)
-# If a tag file is not located in the directory in which doxygen
-# is run, you must also specify the path to the tagfile here.
+#
+# TAGFILES = file1=loc1 "file2 = loc2" ...
+# where "loc1" and "loc2" can be relative or absolute paths
+# or URLs. Note that each tag file must have a unique name (where the name does
+# NOT include the path). If a tag file is not located in the directory in which
+# doxygen is run, you must also specify the path to the tagfile here.
 
 TAGFILES               =
 
@@ -1321,9 +1612,8 @@ PERL_PATH              = /usr/bin/perl
 # If the CLASS_DIAGRAMS tag is set to YES (the default) Doxygen will
 # generate a inheritance diagram (in HTML, RTF and LaTeX) for classes with base
 # or super classes. Setting the tag to NO turns the diagrams off. Note that
-# this option is superseded by the HAVE_DOT option below. This is only a
-# fallback. It is recommended to install and use dot, since it yields more
-# powerful graphs.
+# this option also works with HAVE_DOT disabled, but it is recommended to
+# install and use dot, since it yields more powerful graphs.
 
 CLASS_DIAGRAMS         = YES
 
@@ -1349,14 +1639,20 @@ HIDE_UNDOC_RELATIONS   = YES
 
 HAVE_DOT               = ${DOT_FOUND}
 
-# By default doxygen will write a font called FreeSans.ttf to the output
-# directory and reference it in all dot files that doxygen generates. This
-# font does not include all possible unicode characters however, so when you need
-# these (or just want a differently looking font) you can specify the font name
-# using DOT_FONTNAME. You need need to make sure dot is able to find the font,
-# which can be done by putting it in a standard location or by setting the
-# DOTFONTPATH environment variable or by setting DOT_FONTPATH to the directory
-# containing the font.
+# The DOT_NUM_THREADS specifies the number of dot invocations doxygen is
+# allowed to run in parallel. When set to 0 (the default) doxygen will
+# base this on the number of processors available in the system. You can set it
+# explicitly to a value larger than 0 to get control over the balance
+# between CPU load and processing speed.
+
+DOT_NUM_THREADS        = 0
+
+# By default doxygen will use the Helvetica font for all dot files that
+# doxygen generates. When you want a differently looking font you can specify
+# the font name using DOT_FONTNAME. You need to make sure dot is able to find
+# the font, which can be done by putting it in a standard location or by setting
+# the DOTFONTPATH environment variable or by setting DOT_FONTPATH to the
+# directory containing the font.
 
 DOT_FONTNAME           = FreeSans
 
@@ -1365,17 +1661,16 @@ DOT_FONTNAME           = FreeSans
 
 DOT_FONTSIZE           = 10
 
-# By default doxygen will tell dot to use the output directory to look for the
-# FreeSans.ttf font (which doxygen will put there itself). If you specify a
-# different font using DOT_FONTNAME you can set the path where dot
-# can find it using this tag.
+# By default doxygen will tell dot to use the Helvetica font.
+# If you specify a different font using DOT_FONTNAME you can use DOT_FONTPATH to
+# set the path where dot can find it.
 
 DOT_FONTPATH           =
 
 # If the CLASS_GRAPH and HAVE_DOT tags are set to YES then doxygen
 # will generate a graph for each documented class showing the direct and
 # indirect inheritance relations. Setting this tag to YES will force the
-# the CLASS_DIAGRAMS tag to NO.
+# CLASS_DIAGRAMS tag to NO.
 
 CLASS_GRAPH            = YES
 
@@ -1397,6 +1692,15 @@ GROUP_GRAPHS           = YES
 
 UML_LOOK               = NO
 
+# If the UML_LOOK tag is enabled, the fields and methods are shown inside
+# the class node. If there are many fields or methods and many nodes the
+# graph may become too big to be useful. The UML_LIMIT_NUM_FIELDS
+# threshold limits the number of items for each type to make the size more
+# managable. Set this to 0 for no limit. Note that the threshold may be
+# exceeded by 50% before the limit is enforced.
+
+UML_LIMIT_NUM_FIELDS   = 10
+
 # If set to YES, the inheritance and collaboration graphs will show the
 # relations between templates and their instances.
 
@@ -1433,11 +1737,11 @@ CALL_GRAPH             = ${DOCS_GENERATE_CALL_GRAPHS_STRING}
 CALLER_GRAPH           = NO
 
 # If the GRAPHICAL_HIERARCHY and HAVE_DOT tags are set to YES then doxygen
-# will graphical hierarchy of all classes instead of a textual one.
+# will generate a graphical hierarchy of all classes instead of a textual one.
 
 GRAPHICAL_HIERARCHY    = YES
 
-# If the DIRECTORY_GRAPH, SHOW_DIRECTORIES and HAVE_DOT tags are set to YES
+# If the DIRECTORY_GRAPH and HAVE_DOT tags are set to YES
 # then doxygen will show the dependencies a directory has on other directories
 # in a graphical way. The dependency relations are determined by the #include
 # relations between the files in the directories.
@@ -1445,11 +1749,22 @@ GRAPHICAL_HIERARCHY    = YES
 DIRECTORY_GRAPH        = YES
 
 # The DOT_IMAGE_FORMAT tag can be used to set the image format of the images
-# generated by dot. Possible values are png, jpg, or gif
-# If left blank png will be used.
+# generated by dot. Possible values are svg, png, jpg, or gif.
+# If left blank png will be used. If you choose svg you need to set
+# HTML_FILE_EXTENSION to xhtml in order to make the SVG files
+# visible in IE 9+ (other browsers do not have this requirement).
 
 DOT_IMAGE_FORMAT       = png
 
+# If DOT_IMAGE_FORMAT is set to svg, then this option can be set to YES to
+# enable generation of interactive SVG images that allow zooming and panning.
+# Note that this requires a modern browser other than Internet Explorer.
+# Tested and working are Firefox, Chrome, Safari, and Opera. For IE 9+ you
+# need to set HTML_FILE_EXTENSION to xhtml in order to make the SVG files
+# visible. Older versions of IE do not have SVG support.
+
+INTERACTIVE_SVG        = NO
+
 # The tag DOT_PATH can be used to specify the path where the dot tool can be
 # found. If left blank, it is assumed the dot tool can be found in the path.
 
@@ -1461,6 +1776,12 @@ DOT_PATH               = ${DOT_TOOL_PATH_ONLY}
 
 DOTFILE_DIRS           =
 
+# The MSCFILE_DIRS tag can be used to specify one or more directories that
+# contain msc files that are included in the documentation (see the
+# \mscfile command).
+
+MSCFILE_DIRS           =
+
 # The DOT_GRAPH_MAX_NODES tag can be used to set the maximum number of
 # nodes that will be shown in the graph. If the number of nodes in a graph
 # becomes larger than this value, doxygen will truncate the graph, which is
@@ -1507,12 +1828,3 @@ GENERATE_LEGEND        = YES
 # the various graphs.
 
 DOT_CLEANUP            = YES
-
-#---------------------------------------------------------------------------
-# Options related to the search engine
-#---------------------------------------------------------------------------
-
-# The SEARCHENGINE tag specifies whether or not a search engine should be
-# used. If set to NO the values of all tags below this one will be ignored.
-
-SEARCHENGINE           = YES
diff --git a/scripts/docs/OpenGeoSys-Logo.png b/scripts/docs/OpenGeoSys-Logo.png
new file mode 100644
index 0000000000000000000000000000000000000000..96cec45180ac020f2d25742bef1d3c5ae3647cc0
Binary files /dev/null and b/scripts/docs/OpenGeoSys-Logo.png differ
diff --git a/scripts/docs/doxygen.css b/scripts/docs/doxygen.css
index e981e2c04c8b3362ccb2bd6bd2392bb5066e7cfd..c151fde3de811e449b5481f929ae97e842aa8545 100644
--- a/scripts/docs/doxygen.css
+++ b/scripts/docs/doxygen.css
@@ -1,43 +1,29 @@
-/* The standard CSS for doxygen 
-
-	modified by RossCairns.com
-*/
+/* The standard CSS for doxygen */
 
 body, table, div, p, dl {
 	font-family: Lucida Grande, Verdana, Geneva, Arial, sans-serif;
-	font-size: 12px;
-}
-
-p, div, dl {
-	color:#3E3E3E;
-}
-
-div.contents p {
-	
-	# font-family:Monaco, courier;
-	
+	font-size: 13px;
+	line-height: 1.3;
 }
 
 /* @group Heading Levels */
 
 h1 {
-	margin-bottom: 10px;
-	font-size: 30px;
-	padding: 0px 0px 20px 0px ;
-	
-	border-bottom:1px dotted #E0E0E0;
+	font-size: 150%;
+}
+
+.title {
+	font-size: 150%;
+	font-weight: bold;
+	margin: 10px 2px;
 }
 
 h2 {
-	padding-top: 30px;
-	font-size: 17px;
-	color:#42657B;
-	font-family: Lucida Grande, Verdana, Geneva, Arial, sans-serif;
+	font-size: 120%;
 }
 
 h3 {
-	font-size: 17px;
-	font-family: Lucida Grande, Verdana, Geneva, Arial, sans-serif;
+	font-size: 100%;
 }
 
 dt {
@@ -80,16 +66,13 @@ span.legend {
 
 h3.version {
         font-size: 90%;
-		padding-bottom:10px;
-		border-bottom:1px dotted #E0E0E0;
+        text-align: center;
 }
 
 div.qindex, div.navtab{
-	background-color: #e8eef2;
-	border: 1px solid #84b0c7;
+	background-color: #EBEFF6;
+	border: 1px solid #A3B4D7;
 	text-align: center;
-	margin: 2px;
-	padding: 2px;
 }
 
 div.qindex, div.navpath {
@@ -104,13 +87,13 @@ div.navtab {
 /* @group Link Styling */
 
 a {
-	color: #153788;
+	color: #3D578C;
 	font-weight: normal;
 	text-decoration: none;
 }
 
 .contents a:visited {
-	color: #1b77c5;
+	color: #4665A2;
 }
 
 a:hover {
@@ -123,9 +106,9 @@ a.qindex {
 
 a.qindexHL {
 	font-weight: bold;
-	background-color: #6666cc;
+	background-color: #9CAFD4;
 	color: #ffffff;
-	border: 1px double #9295C2;
+	border: 1px double #869DCA;
 }
 
 .contents a.qindexHL:visited {
@@ -139,12 +122,12 @@ a.el {
 a.elRef {
 }
 
-a.code {
-	color: #3030f0;
+a.code, a.code:visited {
+	color: #4665A2; 
 }
 
-a.codeRef {
-	color: #3030f0;
+a.codeRef, a.codeRef:visited {
+	color: #4665A2; 
 }
 
 /* @end */
@@ -159,8 +142,8 @@ dl.el {
 }
 
 pre.fragment {
-	border: 1px solid #CCCCCC;
-	background-color: #f5f5f5;
+	border: 1px solid #C4CFE5;
+	background-color: #FBFCFD;
 	padding: 4px 6px;
 	margin: 4px 8px 4px 2px;
 	overflow: auto;
@@ -174,13 +157,22 @@ div.ah {
 	font-weight: bold;
 	color: #ffffff;
 	margin-bottom: 3px;
-	margin-top: 3px
+	margin-top: 3px;
+	padding: 0.2em;
+	border: solid thin #333;
+	border-radius: 0.5em;
+	-webkit-border-radius: .5em;
+	-moz-border-radius: .5em;
+	box-shadow: 2px 2px 3px #999;
+	-webkit-box-shadow: 2px 2px 3px #999;
+	-moz-box-shadow: rgba(0, 0, 0, 0.15) 2px 2px 2px;
+	background-image: -webkit-gradient(linear, left top, left bottom, from(#eee), to(#000),color-stop(0.3, #444));
+	background-image: -moz-linear-gradient(center top, #eee 0%, #444 40%, #000);
 }
 
 div.groupHeader {
 	margin-left: 16px;
 	margin-top: 12px;
-	margin-bottom: 6px;
 	font-weight: bold;
 }
 
@@ -189,36 +181,37 @@ div.groupText {
 	font-style: italic;
 }
 
-div.headertitle div {
-  padding-top: 20px;
-  font-size: 20px;
-  font-weiht: bold;
-}
-
 body {
-	background: white;
+	background-color: white;
 	color: black;
-	margin-right: 20px;
-	margin-left: 20px;
+        margin: 0;
+}
+
+div.contents {
+	margin-top: 10px;
+	margin-left: 8px;
+	margin-right: 8px;
 }
 
 td.indexkey {
-	background-color: #F1F5F9;
+	background-color: #EBEFF6;
 	font-weight: bold;
-	border: 1px solid #CCCCCC;
+	border: 1px solid #C4CFE5;
 	margin: 2px 0px 2px 0;
 	padding: 2px 10px;
+        white-space: nowrap;
+        vertical-align: top;
 }
 
 td.indexvalue {
-	background-color: #F1F5F9;
-	border: 1px solid #CCCCCC;
+	background-color: #EBEFF6;
+	border: 1px solid #C4CFE5;
 	padding: 2px 10px;
 	margin: 2px 0px;
 }
 
 tr.memlist {
-	background-color: #f0f0f0;
+	background-color: #EEF1F7;
 }
 
 p.formulaDsp {
@@ -244,6 +237,11 @@ div.center img {
 	border: 0px;
 }
 
+address.footer {
+	text-align: right;
+	padding-right: 12px;
+}
+
 img.footer {
 	border: 0px;
 	vertical-align: middle;
@@ -295,8 +293,16 @@ span.vhdllogic {
 	color: #ff0000 
 }
 
+blockquote {
+        background-color: #F7F8FB;
+        border-left: 2px solid #9CAFD4;
+        margin: 0 24px 0 4px;
+        padding: 0 12px 0 16px;
+}
+
 /* @end */
 
+/*
 .search {
 	color: #003399;
 	font-weight: bold;
@@ -311,8 +317,9 @@ input.search {
 	font-size: 75%;
 	color: #000080;
 	font-weight: normal;
-	background-color: #F1F5F9;
+	background-color: #e8eef2;
 }
+*/
 
 td.tiny {
 	font-size: 75%;
@@ -321,26 +328,35 @@ td.tiny {
 .dirtab {
 	padding: 4px;
 	border-collapse: collapse;
-	border: 1px solid #84b0c7;
+	border: 1px solid #A3B4D7;
 }
 
 th.dirtab {
-	background: #F1F5F9;
+	background: #EBEFF6;
 	font-weight: bold;
 }
 
 hr {
-	height: 0;
+	height: 0px;
 	border: none;
-	border-top: 1px solid #666;
+	border-top: 1px solid #4A6AAA;
+}
+
+hr.footer {
+	height: 1px;
 }
 
 /* @group Member Descriptions */
 
+table.memberdecls {
+	border-spacing: 0px;
+	padding: 0px;
+}
+
 .mdescLeft, .mdescRight,
 .memItemLeft, .memItemRight,
 .memTemplItemLeft, .memTemplItemRight, .memTemplParams {
-	background-color: #FAFAFA;
+	background-color: #F9FAFC;
 	border: none;
 	margin: 4px;
 	padding: 1px 0 0 8px;
@@ -352,16 +368,19 @@ hr {
 }
 
 .memItemLeft, .memItemRight, .memTemplParams {
-	border-top: 1px solid #ccc;
-	background-color: #F9F9F9;
+	border-top: 1px solid #C4CFE5;
 }
 
 .memItemLeft, .memTemplItemLeft {
         white-space: nowrap;
 }
 
+.memItemRight {
+	width: 100%;
+}
+
 .memTemplParams {
-	color: #606060;
+	color: #4665A2;
         white-space: nowrap;
 }
 
@@ -373,51 +392,92 @@ hr {
 
 .memtemplate {
 	font-size: 80%;
-	color: #606060;
+	color: #4665A2;
 	font-weight: normal;
-	margin-left: 3px;
+	margin-left: 9px;
 }
 
 .memnav {
-	background-color: #F1F5F9;
-	border: 1px solid #84b0c7;
+	background-color: #EBEFF6;
+	border: 1px solid #A3B4D7;
 	text-align: center;
 	margin: 2px;
 	margin-right: 15px;
 	padding: 2px;
 }
 
+.mempage {
+	width: 100%;
+}
+
 .memitem {
 	padding: 0;
-	margin-bottom: 30px;
+	margin-bottom: 10px;
+	margin-right: 5px;
 }
 
 .memname {
-	white-space: nowrap;
-	font-weight: bold;
-	color:#42657B;
-	padding:3px 5px;
-}
-
-.memproto, .memdoc {
-	border: 1px dotted #E0E0E0;
-}
-
-.memproto {
-	padding: 0;
-	background-color: #F9F9F9;
-	font-weight: bold;
+        white-space: nowrap;
+        font-weight: bold;
+        margin-left: 6px;
+}
+
+.memproto, dl.reflist dt {
+        border-top: 1px solid #A8B8D9;
+        border-left: 1px solid #A8B8D9;
+        border-right: 1px solid #A8B8D9;
+        padding: 6px 0px 6px 0px;
+        color: #253555;
+        font-weight: bold;
+        text-shadow: 0px 1px 1px rgba(255, 255, 255, 0.9);
+        /* opera specific markup */
+        box-shadow: 5px 5px 5px rgba(0, 0, 0, 0.15);
+        border-top-right-radius: 8px;
+        border-top-left-radius: 8px;
+        /* firefox specific markup */
+        -moz-box-shadow: rgba(0, 0, 0, 0.15) 5px 5px 5px;
+        -moz-border-radius-topright: 8px;
+        -moz-border-radius-topleft: 8px;
+        /* webkit specific markup */
         -webkit-box-shadow: 5px 5px 5px rgba(0, 0, 0, 0.15);
+        -webkit-border-top-right-radius: 8px;
+        -webkit-border-top-left-radius: 8px;
+        background-image:url('nav_f.png');
+        background-repeat:repeat-x;
+        background-color: #E2E8F2;
+
+}
+
+.memdoc, dl.reflist dd {
+        border-bottom: 1px solid #A8B8D9;      
+        border-left: 1px solid #A8B8D9;      
+        border-right: 1px solid #A8B8D9; 
+        padding: 2px 5px;
+        background-color: #FBFCFD;
+        border-top-width: 0;
+        /* opera specific markup */
+        border-bottom-left-radius: 8px;
+        border-bottom-right-radius: 8px;
+        box-shadow: 5px 5px 5px rgba(0, 0, 0, 0.15);
+        /* firefox specific markup */
+        -moz-border-radius-bottomleft: 8px;
+        -moz-border-radius-bottomright: 8px;
         -moz-box-shadow: rgba(0, 0, 0, 0.15) 5px 5px 5px;
+        background-image: -moz-linear-gradient(center top, #FFFFFF 0%, #FFFFFF 60%, #F7F8FB 95%, #EEF1F7);
+        /* webkit specific markup */
+        -webkit-border-bottom-left-radius: 8px;
+        -webkit-border-bottom-right-radius: 8px;
+        -webkit-box-shadow: 5px 5px 5px rgba(0, 0, 0, 0.15);
+        background-image: -webkit-gradient(linear,center top,center bottom,from(#FFFFFF), color-stop(0.6,#FFFFFF), color-stop(0.60,#FFFFFF), color-stop(0.95,#F7F8FB), to(#EEF1F7));
+}
 
+dl.reflist dt {
+        padding: 5px;
 }
 
-.memdoc {
-	padding: 2px 20px 20px;
-	background-color: #FFFFFF;
-	border-top-width: 0;
-        -webkit-box-shadow: 5px 5px 5px rgba(0, 0, 0, 0.15);
-        -moz-box-shadow: rgba(0, 0, 0, 0.15) 5px 5px 5px;
+dl.reflist dd {
+        margin: 0px 0px 10px 0px;
+        padding: 5px;
 }
 
 .paramkey {
@@ -429,13 +489,35 @@ hr {
 }
 
 .paramname {
-	color: #885656;
+	color: #602020;
 	white-space: nowrap;
 }
 .paramname em {
 	font-style: normal;
 }
 
+.params, .retval, .exception, .tparams {
+        border-spacing: 6px 2px;
+}       
+
+.params .paramname, .retval .paramname {
+        font-weight: bold;
+        vertical-align: top;
+}
+        
+.params .paramtype {
+        font-style: italic;
+        vertical-align: top;
+}       
+        
+.params .paramdir {
+        font-family: "courier new",courier,monospace;
+        vertical-align: top;
+}
+
+
+
+
 /* @end */
 
 /* @group Directory (tree) */
@@ -444,7 +526,7 @@ hr {
 
 .ftvtree {
 	font-family: sans-serif;
-	margin: 0.5em;
+	margin: 0px;
 }
 
 /* these are for tree view when used as main index */
@@ -452,6 +534,7 @@ hr {
 .directory {
 	font-size: 9pt;
 	font-weight: bold;
+	margin: 5px;
 }
 
 .directory h3 {
@@ -529,44 +612,401 @@ proper pixel height of your image.
 
 /* @end */
 
+div.dynheader {
+        margin-top: 8px;
+}
+
 address {
 	font-style: normal;
-	color: #333;
+	color: #2A3D61;
 }
 
 table.doxtable {
 	border-collapse:collapse;
+        margin-top: 4px;
+        margin-bottom: 4px;
 }
 
 table.doxtable td, table.doxtable th {
-	border: 1px solid #153788;
+	border: 1px solid #2D4068;
 	padding: 3px 7px 2px;
 }
 
 table.doxtable th {
-	background-color: #254798;
+	background-color: #374F7F;
 	color: #FFFFFF;
 	font-size: 110%;
 	padding-bottom: 4px;
 	padding-top: 5px;
-	text-align:left;
 }
 
+table.fieldtable {
+        width: 100%;
+        margin-bottom: 10px;
+        border: 1px solid #A8B8D9;
+        border-spacing: 0px;
+        -moz-border-radius: 4px;
+        -webkit-border-radius: 4px;
+        border-radius: 4px;
+        -moz-box-shadow: rgba(0, 0, 0, 0.15) 2px 2px 2px;
+        -webkit-box-shadow: 2px 2px 2px rgba(0, 0, 0, 0.15);
+        box-shadow: 2px 2px 2px rgba(0, 0, 0, 0.15);
+}
 
-hr {
-	border-top:1px dotted #E0E0E0;
-	border-bottom:1px dotted #E0E0E0;
-	margin-top:30px;
-	padding-top:10px;
+.fieldtable td, .fieldtable th {
+        padding: 3px 7px 2px;
 }
 
-.contents {
-	padding-top: 30px;
+.fieldtable td.fieldtype, .fieldtable td.fieldname {
+        white-space: nowrap;
+        border-right: 1px solid #A8B8D9;
+        border-bottom: 1px solid #A8B8D9;
+        vertical-align: top;
 }
 
-h1 {
-	margin-top:0;
+.fieldtable td.fielddoc {
+        border-bottom: 1px solid #A8B8D9;
+        width: 100%;
+}
+
+.fieldtable tr:last-child td {
+        border-bottom: none;
+}
+
+.fieldtable th {
+        background-image:url('nav_f.png');
+        background-repeat:repeat-x;
+        background-color: #E2E8F2;
+        font-size: 90%;
+        color: #253555;
+        padding-bottom: 4px;
+        padding-top: 5px;
+        text-align:left;
+        -moz-border-radius-topleft: 4px;
+        -moz-border-radius-topright: 4px;
+        -webkit-border-top-left-radius: 4px;
+        -webkit-border-top-right-radius: 4px;
+        border-top-left-radius: 4px;
+        border-top-right-radius: 4px;
+        border-bottom: 1px solid #A8B8D9;
+}
+
+
+.tabsearch {
+	top: 0px;
+	left: 10px;
+	height: 36px;
+	background-image: url('tab_b.png');
+	z-index: 101;
+	overflow: hidden;
+	font-size: 13px;
+}
+
+.navpath ul
+{
+	font-size: 11px;
+	background-image:url('tab_b.png');
+	background-repeat:repeat-x;
+	height:30px;
+	line-height:30px;
+	color:#8AA0CC;
+	border:solid 1px #C2CDE4;
+	overflow:hidden;
+	margin:0px;
+	padding:0px;
+}
+
+.navpath li
+{
+	list-style-type:none;
+	float:left;
+	padding-left:10px;
+	padding-right:15px;
+	background-image:url('bc_s.png');
+	background-repeat:no-repeat;
+	background-position:right;
+	color:#364D7C;
+}
+
+.navpath li.navelem a
+{
+	height:32px;
+	display:block;
+	text-decoration: none;
+	outline: none;
+}
+
+.navpath li.navelem a:hover
+{
+	color:#6884BD;
+}
+
+.navpath li.footer
+{
+        list-style-type:none;
+        float:right;
+        padding-left:10px;
+        padding-right:15px;
+        background-image:none;
+        background-repeat:no-repeat;
+        background-position:right;
+        color:#364D7C;
+        font-size: 8pt;
+}
+
+
+div.summary
+{
+	float: right;
+	font-size: 8pt;
+	padding-right: 5px;
+	width: 50%;
+	text-align: right;
+}       
+
+div.summary a
+{
+	white-space: nowrap;
+}
+
+div.ingroups
+{
+	margin-left: 5px;
+	font-size: 8pt;
+	padding-left: 5px;
+	width: 50%;
+	text-align: left;
+}
+
+div.ingroups a
+{
+	white-space: nowrap;
+}
+
+div.header
+{
+        background-image:url('nav_h.png');
+        background-repeat:repeat-x;
+	background-color: #F9FAFC;
+	margin:  0px;
+	border-bottom: 1px solid #C4CFE5;
+}
+
+div.headertitle
+{
+	padding: 5px 5px 5px 7px;
+}
+
+dl
+{
+        padding: 0 0 0 10px;
+}
+
+/* dl.note, dl.warning, dl.attention, dl.pre, dl.post, dl.invariant, dl.deprecated, dl.todo, dl.test, dl.bug */
+dl.section
+{
+        border-left:4px solid;
+        padding: 0 0 0 6px;
+}
+
+dl.note
+{
+        border-color: #D0C000;
+}
+
+dl.warning, dl.attention
+{
+        border-color: #FF0000;
+}
+
+dl.pre, dl.post, dl.invariant
+{
+        border-color: #00D000;
+}
+
+dl.deprecated
+{
+        border-color: #505050;
+}
+
+dl.todo
+{
+        border-color: #00C0E0;
+}
+
+dl.test
+{
+        border-color: #3030E0;
+}
+
+dl.bug
+{
+        border-color: #C08050;
+}
+
+dl.section dd {
+	margin-bottom: 6px;
+}
+
+
+#projectlogo
+{
+	text-align: center;
+	vertical-align: bottom;
+	border-collapse: separate;
+}
+ 
+#projectlogo img
+{ 
+	border: 0px none;
+}
+ 
+#projectname
+{
+	font: 300% Tahoma, Arial,sans-serif;
+	margin: 0px;
+	padding: 2px 0px;
+}
+    
+#projectbrief
+{
+	font: 120% Tahoma, Arial,sans-serif;
+	margin: 0px;
+	padding: 0px;
+}
+
+#projectnumber
+{
+	font: 50% Tahoma, Arial,sans-serif;
+	margin: 0px;
+	padding: 0px;
 }
-.contents .dynsection {
-	margin-top:10px;
+
+#titlearea
+{
+	padding: 0px;
+	margin: 0px;
+	width: 100%;
+	border-bottom: 1px solid #5373B4;
+}
+
+.image
+{
+        text-align: center;
+}
+
+.dotgraph
+{
+        text-align: center;
+}
+
+.mscgraph
+{
+        text-align: center;
+}
+
+.caption
+{
+	font-weight: bold;
+}
+
+div.zoom
+{
+	border: 1px solid #90A5CE;
 }
+
+dl.citelist {
+        margin-bottom:50px;
+}
+
+dl.citelist dt {
+        color:#334975;
+        float:left;
+        font-weight:bold;
+        margin-right:10px;
+        padding:5px;
+}
+
+dl.citelist dd {
+        margin:2px 0;
+        padding:5px 0;
+}
+
+div.toc {
+        padding: 14px 25px;
+        background-color: #F4F6FA;
+        border: 1px solid #D8DFEE;
+        border-radius: 7px 7px 7px 7px;
+        float: right;
+        height: auto;
+        margin: 0 20px 10px 10px;
+        width: 200px;
+}
+
+div.toc li {
+        background: url("bdwn.png") no-repeat scroll 0 5px transparent;
+        font: 10px/1.2 Verdana,DejaVu Sans,Geneva,sans-serif;
+        margin-top: 5px;
+        padding-left: 10px;
+        padding-top: 2px;
+}
+
+div.toc h3 {
+        font: bold 12px/1.2 Arial,FreeSans,sans-serif;
+	color: #4665A2;
+        border-bottom: 0 none;
+        margin: 0;
+}
+
+div.toc ul {
+        list-style: none outside none;
+        border: medium none;
+        padding: 0px;
+}       
+
+div.toc li.level1 {
+        margin-left: 0px;
+}
+
+div.toc li.level2 {
+        margin-left: 15px;
+}
+
+div.toc li.level3 {
+        margin-left: 30px;
+}
+
+div.toc li.level4 {
+        margin-left: 45px;
+}
+
+
+@media print
+{
+  #top { display: none; }
+  #side-nav { display: none; }
+  #nav-path { display: none; }
+  body { overflow:visible; }
+  h1, h2, h3, h4, h5, h6 { page-break-after: avoid; }
+  .summary { display: none; }
+  .memitem { page-break-inside: avoid; }
+  #doc-content
+  {
+    margin-left:0 !important;
+    height:auto !important;
+    width:auto !important;
+    overflow:inherit;
+    display:inline;
+  }
+  pre.fragment
+  {
+    overflow: visible;
+    text-wrap: unrestricted;
+    white-space: -moz-pre-wrap; /* Moz */
+    white-space: -pre-wrap; /* Opera 4-6 */
+    white-space: -o-pre-wrap; /* Opera 7 */
+    white-space: pre-wrap; /* CSS3  */
+    word-wrap: break-word; /* IE 5.5+ */
+  }
+}
+
diff --git a/scripts/docs/tabs.css b/scripts/docs/tabs.css
index 3557a2cd5a0b5262a93d195ff4f202093011e3b6..21920562a831f80ad5df7d913b1d3d64db994510 100644
--- a/scripts/docs/tabs.css
+++ b/scripts/docs/tabs.css
@@ -1,138 +1,59 @@
-/* tabs styles, based on http://www.alistapart.com/articles/slidingdoors */
-
-div.navigation {
-	display:block;
-	float:left;
-	clear:both;
-	width:100%;
-	padding-top:10px;
-	padding-bottom:30px;
-	border-bottom:1px dotted #E0E0E0;
-	height: 60px;
-	background:url(background_navigation.png);
-}
-
-div.contents {
-	float:left;
-	clear:both;
-	
-}
-
-address {
-	display:none;
-}
-
-DIV.tabs, DIV.tabs2
-{
-   float            : left;
-   width            : 100%;
-   margin-bottom    : 4px;
-}
-
-DIV.tabs UL, DIV.tabs2 UL
-{
-   margin           : 0px;
-   padding-left     : 0px;
-   list-style       : none;
+.tabs, .tabs2, .tabs3 {
+    background-image: url('tab_b.png');
+    width: 100%;
+    z-index: 101;
+    font-size: 13px;
 }
 
-DIV.tabs LI, DIV.tabs FORM, , DIV.tabs2 LI, DIV.tabs2 FORM
-{
-   display          : inline;
-   margin           : 0px;
-   padding          : 0px;
-	background-color:#FFFFFF;
+.tabs2 {
+    font-size: 10px;
 }
-
-DIV.tabs FORM, DIV.tabs2 FORM
-{
-   float            : right;
-}
-
-DIV.tabs A
-{
-   float            : left;
-   font-size        : 120%;
-   font-weight      : bold;
-   text-decoration  : none;
+.tabs3 {
+    font-size: 9px;
 }
 
-DIV.tabs2 A
-{
-   float            : left;
-   font-size        : 100%;
-   font-weight      : bold;
-   text-decoration  : none;
+.tablist {
+    margin: 0;
+    padding: 0;
+    display: table;
 }
 
-DIV.tabs A:hover, DIV.tabs2 A:hover
-{
-   background-position: 100% -150px;
+.tablist li {
+    float: left;
+    display: table-cell;
+    background-image: url('tab_b.png');
+    line-height: 36px;
+    list-style: none;
 }
 
-DIV.tabs A:link, DIV.tabs A:visited,
-DIV.tabs A:active, DIV.tabs A:hover,
-DIV.tabs2 A:link, DIV.tabs2 A:visited,
-DIV.tabs2 A:active, DIV.tabs2 A:hover
-{
-       color: #1A419D;
-}
-
-DIV.tabs SPAN, DIV.tabs2 SPAN
-{
-   float            : left;
-   display          : block;
-   padding          : 5px 9px;
-   white-space      : nowrap;
-	border-top:1px dotted #E0E0E0;
-	border-bottom:1px dotted #E0E0E0;
-}
-
-DIV.tabs #MSearchBox, DIV.tabs2 #MSearchBox
-{
-   float            : right;
-   display          : inline;
-   font-size        : 1em;
-}
-
-DIV.tabs TD, DIV.tabs2 TD
-{
-   font-size        : 80%;
-   font-weight      : bold;
-   text-decoration  : none;
-}
-
-
-
-/* Commented Backslash Hack hides rule from IE5-Mac \*/
-DIV.tabs SPAN {float : none;}
-/* End IE5-Mac hack */
-
-DIV.tabs A:hover SPAN
-{
-   background-position: 0% -150px;
+.tablist a {
+    display: block;
+    padding: 0 20px;
+    font-weight: bold;
+    background-image:url('tab_s.png');
+    background-repeat:no-repeat;
+    background-position:right;
+    color: #283A5D;
+    text-shadow: 0px 1px 1px rgba(255, 255, 255, 0.9);
+    text-decoration: none;
+    outline: none;
 }
 
-DIV.tabs LI.current A
-{
-   background-position: 100% -150px;
-   border-width     : 0px;
-	background-color:	#F0F0F0;
-	background: #F0F0F0 url(img_downArrow.png) center bottom no-repeat;
+.tabs3 .tablist a {
+    padding: 0 10px;
 }
 
-DIV.tabs LI.current SPAN
-{
-   background-position: 0% -150px;
-   padding-bottom   : 6px;
+.tablist a:hover {
+    background-image: url('tab_h.png');
+    background-repeat:repeat-x;
+    color: #fff;
+    text-shadow: 0px 1px 1px rgba(0, 0, 0, 1.0);
+    text-decoration: none;
 }
 
-DIV.navpath
-{
-   background       : none;
-   border           : none;
-   border-bottom    : 1px solid #84B0C7;
-   text-align       : center;
-   margin           : 2px;
-   padding          : 2px;
+.tablist li.current a {
+    background-image: url('tab_a.png');
+    background-repeat:repeat-x;
+    color: #fff;
+    text-shadow: 0px 1px 1px rgba(0, 0, 0, 1.0);
 }