From 343dd4a4c25a4d5bbdd488cd5d899fec588a30db Mon Sep 17 00:00:00 2001
From: Lars Bilke <lars.bilke@ufz.de>
Date: Tue, 16 Jan 2024 18:10:46 +0100
Subject: [PATCH] ogs with mkl: add LD_LIBRARY_PATH
Should fix Error: libiomp5.so: cannot open shared object file
---
ogscm/recipes/ogs.py | 8 ++++++++
1 file changed, 8 insertions(+)
diff --git a/ogscm/recipes/ogs.py b/ogscm/recipes/ogs.py
index 48925f9..92eb230 100644
--- a/ogscm/recipes/ogs.py
+++ b/ogscm/recipes/ogs.py
@@ -338,6 +338,7 @@ versions_master = json.loads(
if local_args.mkl:
Stage0 += packages(ospackages=["ca-certificates", "gnupg", "wget"])
+ Stage1 += packages(ospackages=["ca-certificates", "gnupg", "wget"])
mkl_version = "2021.4.0"
Stage0 += packages(
apt_keys=[
@@ -353,6 +354,13 @@ if local_args.mkl:
apt_repositories=["deb https://apt.repos.intel.com/oneapi all main"],
ospackages=[f"intel-oneapi-mkl-{mkl_version}"],
)
+ mkl_env = environment(
+ variables={
+ "LD_LIBRARY_PATH": f"/opt/intel/oneapi/tbb/{mkl_version}/env/../lib/intel64/gcc4.8:/opt/intel/oneapi/mkl/{mkl_version}/lib/intel64:/opt/intel/oneapi/compiler/{mkl_version}/linux/lib:/opt/intel/oneapi/compiler/{mkl_version}/linux/lib/x64:/opt/intel/oneapi/compiler/{mkl_version}/linux/lib/emu:/opt/intel/oneapi/compiler/{mkl_version}/linux/compiler/lib/intel64_lin:$LD_LIBRARY_PATH"
+ }
+ )
+ Stage0 += mkl_env
+ Stage1 += mkl_env
cmake_args.append("-DOGS_USE_MKL=ON")
if local_args.ogs != "clean":
--
GitLab