From 1bbfe1789d07f8ae727a08b8386369ee736582cc Mon Sep 17 00:00:00 2001
From: Efraim Flashner <efraim@flashner.co.il>
Date: Tue, 19 Jan 2021 11:36:01 +0200
Subject: [PATCH] gnu: vcflib: Add pkg-config file.
* gnu/packages/bioinformatics.scm (vcflib)[arguments]: Add phase to
create pkg-config file.
---
gnu/packages/bioinformatics.scm | 23 ++++++++++++++++++++++-
1 file changed, 22 insertions(+), 1 deletion(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 1164873ecc0..95352f948b1 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -15083,7 +15083,28 @@ (define-public vcflib
(unpack "fsom-src" "fsom")
(unpack "intervaltree-src" "intervaltree")
(unpack "multichoose-src" "multichoose"))
- #t))))))
+ #t)))
+ ;; This pkg-config file is provided by other distributions.
+ (add-after 'install 'install-pkg-config-file
+ (lambda* (#:key outputs #:allow-other-keys)
+ (let* ((out (assoc-ref outputs "out"))
+ (pkgconfig (string-append out "/lib/pkgconfig")))
+ (mkdir-p pkgconfig)
+ (with-output-to-file (string-append pkgconfig "/libvcflib.pc")
+ (lambda _
+ (format #t "prefix=~a~@
+ exec_prefix=${prefix}~@
+ libdir=${exec_prefix}/lib~@
+ includedir=${prefix}/include~@
+ ~@
+ Name: libvcflib~@
+ Version: ~a~@
+ Requires: smithwaterman, fastahack~@
+ Description: C++ library for parsing and manipulating VCF files~@
+ Libs: -L${libdir} -llibvcflib~@
+ Cflags: -I${includedir}~%"
+ out ,version)))
+ #t))))))
(home-page "https://github.com/vcflib/vcflib/")
(synopsis "Library for parsing and manipulating VCF files")
(description "Vcflib provides methods to manipulate and interpret
--
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