From a6fedf1f37dd031829caae0b743016cd5d52f06c Mon Sep 17 00:00:00 2001
From: zimoun <zimon.toutoune@gmail.com>
Date: Wed, 24 Jul 2019 20:21:57 +0200
Subject: [PATCH] gnu: Add r-flowcore.
* gnu/packages/bioconductor.scm (r-flowcore): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
---
gnu/packages/bioconductor.scm | 30 ++++++++++++++++++++++++++++++
1 file changed, 30 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 649b64a4d77..93dec5bd1dc 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -4797,3 +4797,33 @@ (define-public r-rsubread
gene fusion discovery. It can be applied to all major sequencing techologies
and to both short and long sequence reads.")
(license license:gpl3)))
+
+(define-public r-flowcore
+ (package
+ (name "r-flowcore")
+ (version "1.50.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "flowCore" version))
+ (sha256
+ (base32
+ "0pvcyzycsmgc8iw60q9xnhllfan6ihwpz3gvk8h1n9jmhpxzylan"))))
+ (properties `((upstream-name . "flowCore")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-bh" ,r-bh)
+ ("r-biobase" ,r-biobase)
+ ("r-biocgenerics" ,r-biocgenerics)
+ ("r-corpcor" ,r-corpcor)
+ ("r-graph" ,r-graph)
+ ("r-mass" ,r-mass)
+ ("r-matrixstats" ,r-matrixstats)
+ ("r-rcpp" ,r-rcpp)
+ ("r-rrcov" ,r-rrcov)))
+ (home-page "https://bioconductor.org/packages/flowCore")
+ (synopsis "Basic structures for flow cytometry data")
+ (description
+ "This package provides S4 data structures and basic functions to deal
+with flow cytometry data.")
+ (license license:artistic2.0)))
--
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