diff --git a/Applications/ApplicationsLib/ProjectData.cpp b/Applications/ApplicationsLib/ProjectData.cpp
index f92ee5e6f83a5c2fe43f4fad4f692f7107a58815..16a61dc57b77c79fcad25733e461a375b6f469d8 100644
--- a/Applications/ApplicationsLib/ProjectData.cpp
+++ b/Applications/ApplicationsLib/ProjectData.cpp
@@ -65,7 +65,6 @@ ProjectData::ProjectData(BaseLib::ConfigTree const& project_config,
auto const mesh_param = project_config.getConfigParameter("mesh");
std::string const mesh_file = BaseLib::copyPathToFileName(
- //! \ogs_file_param{prj__mesh}
mesh_param.getValue<std::string>(), project_directory);
MeshLib::Mesh* const mesh = MeshLib::IO::readMeshFromFile(mesh_file);
@@ -76,7 +75,7 @@ ProjectData::ProjectData(BaseLib::ConfigTree const& project_config,
}
if (auto const axially_symmetric =
- //! \ogs_file_param{prj__mesh__axial_symmetric}
+ //! \ogs_file_attr{prj__mesh__axially_symmetric}
mesh_param.getConfigAttributeOptional<bool>("axially_symmetric"))
{
mesh->setAxiallySymmetric(*axially_symmetric);
@@ -263,12 +262,13 @@ void ProjectData::parseProcesses(BaseLib::ConfigTree const& processes_config,
//! \ogs_file_param{process__type}
auto const type = process_config.peekConfigParameter<std::string>("type");
- //! \ogs_file_param{process__type}
+ //! \ogs_file_param{process__name}
auto const name = process_config.getConfigParameter<std::string>("name");
std::unique_ptr<ProcessLib::Process> process;
auto jacobian_assembler = ProcessLib::createJacobianAssembler(
+ //! \ogs_file_param{process__jacobian_assembler}
process_config.getConfigSubtreeOptional("jacobian_assembler"));
if (type == "GROUNDWATER_FLOW")
@@ -297,6 +297,7 @@ void ProjectData::parseProcesses(BaseLib::ConfigTree const& processes_config,
}
else if (type == "SMALL_DEFORMATION")
{
+ //! \ogs_file_param{process__SMALL_DEFORMATION__dimension}
switch (process_config.getConfigParameter<int>("dimension"))
{
case 2:
diff --git a/Documentation/ProjectFile/boundary_condition/UniformDirichlet/c_UniformDirichlet.md b/Documentation/ProjectFile/boundary_condition/Dirichlet/c_Dirichlet.md
similarity index 100%
rename from Documentation/ProjectFile/boundary_condition/UniformDirichlet/c_UniformDirichlet.md
rename to Documentation/ProjectFile/boundary_condition/Dirichlet/c_Dirichlet.md
diff --git a/Documentation/ProjectFile/prj/output/VTK/c_VTK.md b/Documentation/ProjectFile/boundary_condition/Dirichlet/t_parameter.md
similarity index 100%
rename from Documentation/ProjectFile/prj/output/VTK/c_VTK.md
rename to Documentation/ProjectFile/boundary_condition/Dirichlet/t_parameter.md
diff --git a/Documentation/ProjectFile/boundary_condition/UniformDirichlet/t_value.md b/Documentation/ProjectFile/boundary_condition/UniformDirichlet/t_value.md
deleted file mode 100644
index dd12bb0335972c7bd7f5cf7757ab8462e3bc0073..0000000000000000000000000000000000000000
--- a/Documentation/ProjectFile/boundary_condition/UniformDirichlet/t_value.md
+++ /dev/null
@@ -1 +0,0 @@
-The value to which the unknown is set on this Dirichlet boundary.
diff --git a/Documentation/ProjectFile/prj/output/i_output.md b/Documentation/ProjectFile/material/fluid/density/IdealGasLaw/c_IdealGasLaw.md
similarity index 100%
rename from Documentation/ProjectFile/prj/output/i_output.md
rename to Documentation/ProjectFile/material/fluid/density/IdealGasLaw/c_IdealGasLaw.md
diff --git a/Documentation/ProjectFile/prj/output/t_output_iteration_results.md b/Documentation/ProjectFile/material/fluid/density/IdealGasLaw/t_molar_mass.md
similarity index 100%
rename from Documentation/ProjectFile/prj/output/t_output_iteration_results.md
rename to Documentation/ProjectFile/material/fluid/density/IdealGasLaw/t_molar_mass.md
diff --git a/Documentation/ProjectFile/prj/output/t_prefix.md b/Documentation/ProjectFile/material/fluid/density/i_density.md
similarity index 100%
rename from Documentation/ProjectFile/prj/output/t_prefix.md
rename to Documentation/ProjectFile/material/fluid/density/i_density.md
diff --git a/Documentation/ProjectFile/prj/output/t_type.md b/Documentation/ProjectFile/material/fluid/density/linear_temperature/i_linear_temperature.md
similarity index 100%
rename from Documentation/ProjectFile/prj/output/t_type.md
rename to Documentation/ProjectFile/material/fluid/density/linear_temperature/i_linear_temperature.md
diff --git a/Documentation/ProjectFile/prj/output/timesteps/i_timesteps.md b/Documentation/ProjectFile/material/fluid/density/linear_temperature/t_beta.md
similarity index 100%
rename from Documentation/ProjectFile/prj/output/timesteps/i_timesteps.md
rename to Documentation/ProjectFile/material/fluid/density/linear_temperature/t_beta.md
diff --git a/Documentation/ProjectFile/prj/output/timesteps/pair/i_pair.md b/Documentation/ProjectFile/material/fluid/density/linear_temperature/t_temperature0.md
similarity index 100%
rename from Documentation/ProjectFile/prj/output/timesteps/pair/i_pair.md
rename to Documentation/ProjectFile/material/fluid/density/linear_temperature/t_temperature0.md
diff --git a/Documentation/ProjectFile/prj/output/timesteps/pair/t_each_steps.md b/Documentation/ProjectFile/material/fluid/density/liquid_density/i_liquid_density.md
similarity index 100%
rename from Documentation/ProjectFile/prj/output/timesteps/pair/t_each_steps.md
rename to Documentation/ProjectFile/material/fluid/density/liquid_density/i_liquid_density.md
diff --git a/Documentation/ProjectFile/prj/output/timesteps/pair/t_repeat.md b/Documentation/ProjectFile/material/fluid/density/liquid_density/t_bulk_modulus.md
similarity index 100%
rename from Documentation/ProjectFile/prj/output/timesteps/pair/t_repeat.md
rename to Documentation/ProjectFile/material/fluid/density/liquid_density/t_bulk_modulus.md
diff --git a/Documentation/ProjectFile/prj/time_stepping/FixedTimeStepping/c_FixedTimeStepping.md b/Documentation/ProjectFile/material/fluid/density/liquid_density/t_p0.md
similarity index 100%
rename from Documentation/ProjectFile/prj/time_stepping/FixedTimeStepping/c_FixedTimeStepping.md
rename to Documentation/ProjectFile/material/fluid/density/liquid_density/t_p0.md
diff --git a/Documentation/ProjectFile/prj/time_stepping/FixedTimeStepping/t_t_end.md b/Documentation/ProjectFile/material/fluid/density/liquid_density/t_rho0.md
similarity index 100%
rename from Documentation/ProjectFile/prj/time_stepping/FixedTimeStepping/t_t_end.md
rename to Documentation/ProjectFile/material/fluid/density/liquid_density/t_rho0.md
diff --git a/Documentation/ProjectFile/prj/time_stepping/FixedTimeStepping/t_t_initial.md b/Documentation/ProjectFile/material/fluid/density/liquid_density/t_temperature0.md
similarity index 100%
rename from Documentation/ProjectFile/prj/time_stepping/FixedTimeStepping/t_t_initial.md
rename to Documentation/ProjectFile/material/fluid/density/liquid_density/t_temperature0.md
diff --git a/Documentation/ProjectFile/prj/time_stepping/t_type.md b/Documentation/ProjectFile/material/fluid/density/t_type.md
similarity index 100%
rename from Documentation/ProjectFile/prj/time_stepping/t_type.md
rename to Documentation/ProjectFile/material/fluid/density/t_type.md
diff --git a/Documentation/ProjectFile/prj/time_stepping/FixedTimeStepping/timesteps/i_timesteps.md b/Documentation/ProjectFile/material/fluid/density/t_value.md
similarity index 100%
rename from Documentation/ProjectFile/prj/time_stepping/FixedTimeStepping/timesteps/i_timesteps.md
rename to Documentation/ProjectFile/material/fluid/density/t_value.md
diff --git a/Documentation/ProjectFile/prj/time_stepping/FixedTimeStepping/timesteps/pair/i_pair.md b/Documentation/ProjectFile/material/fluid/viscosity/Constant/c_Constant.md
similarity index 100%
rename from Documentation/ProjectFile/prj/time_stepping/FixedTimeStepping/timesteps/pair/i_pair.md
rename to Documentation/ProjectFile/material/fluid/viscosity/Constant/c_Constant.md
diff --git a/Documentation/ProjectFile/prj/time_stepping/FixedTimeStepping/timesteps/pair/t_delta_t.md b/Documentation/ProjectFile/material/fluid/viscosity/Constant/t_value.md
similarity index 100%
rename from Documentation/ProjectFile/prj/time_stepping/FixedTimeStepping/timesteps/pair/t_delta_t.md
rename to Documentation/ProjectFile/material/fluid/viscosity/Constant/t_value.md
diff --git a/Documentation/ProjectFile/prj/time_stepping/FixedTimeStepping/timesteps/pair/t_repeat.md b/Documentation/ProjectFile/material/fluid/viscosity/temperature_dependent/i_temperature_dependent.md
similarity index 100%
rename from Documentation/ProjectFile/prj/time_stepping/FixedTimeStepping/timesteps/pair/t_repeat.md
rename to Documentation/ProjectFile/material/fluid/viscosity/temperature_dependent/i_temperature_dependent.md
diff --git a/Documentation/ProjectFile/prj/time_stepping/SingleStep/c_SingleStep.md b/Documentation/ProjectFile/material/fluid/viscosity/temperature_dependent/t_gamma.md
similarity index 100%
rename from Documentation/ProjectFile/prj/time_stepping/SingleStep/c_SingleStep.md
rename to Documentation/ProjectFile/material/fluid/viscosity/temperature_dependent/t_gamma.md
diff --git a/Documentation/ProjectFile/prj/time_stepping/i_time_stepping.md b/Documentation/ProjectFile/material/fluid/viscosity/temperature_dependent/t_p0.md
similarity index 100%
rename from Documentation/ProjectFile/prj/time_stepping/i_time_stepping.md
rename to Documentation/ProjectFile/material/fluid/viscosity/temperature_dependent/t_p0.md
diff --git a/Documentation/ProjectFile/process/output/i_output.md b/Documentation/ProjectFile/material/fluid/viscosity/temperature_dependent/t_tc.md
similarity index 100%
rename from Documentation/ProjectFile/process/output/i_output.md
rename to Documentation/ProjectFile/material/fluid/viscosity/temperature_dependent/t_tc.md
diff --git a/Documentation/ProjectFile/process/output/t_output_extrapolation_residuals.md b/Documentation/ProjectFile/material/fluid/viscosity/temperature_dependent/t_tv.md
similarity index 100%
rename from Documentation/ProjectFile/process/output/t_output_extrapolation_residuals.md
rename to Documentation/ProjectFile/material/fluid/viscosity/temperature_dependent/t_tv.md
diff --git a/Documentation/ProjectFile/process/output/t_output_iteration_results.md b/Documentation/ProjectFile/parameter/CurveScaled/c_CurveScaled.md
similarity index 100%
rename from Documentation/ProjectFile/process/output/t_output_iteration_results.md
rename to Documentation/ProjectFile/parameter/CurveScaled/c_CurveScaled.md
diff --git a/Documentation/ProjectFile/process/output/variables/i_variables.md b/Documentation/ProjectFile/parameter/CurveScaled/t_curve.md
similarity index 100%
rename from Documentation/ProjectFile/process/output/variables/i_variables.md
rename to Documentation/ProjectFile/parameter/CurveScaled/t_curve.md
diff --git a/Documentation/ProjectFile/process/output/variables/t_variable.md b/Documentation/ProjectFile/parameter/CurveScaled/t_parameter.md
similarity index 100%
rename from Documentation/ProjectFile/process/output/variables/t_variable.md
rename to Documentation/ProjectFile/parameter/CurveScaled/t_parameter.md
diff --git a/Documentation/ProjectFile/process/t_nonlinear_solver.md b/Documentation/ProjectFile/parameter/Group/index_values/i_index_values.md
similarity index 100%
rename from Documentation/ProjectFile/process/t_nonlinear_solver.md
rename to Documentation/ProjectFile/parameter/Group/index_values/i_index_values.md
diff --git a/Documentation/ProjectFile/process/time_discretization/BackwardDifferentiationFormula/c_BackwardDifferentiationFormula.md b/Documentation/ProjectFile/parameter/Group/index_values/t_index.md
similarity index 100%
rename from Documentation/ProjectFile/process/time_discretization/BackwardDifferentiationFormula/c_BackwardDifferentiationFormula.md
rename to Documentation/ProjectFile/parameter/Group/index_values/t_index.md
diff --git a/Documentation/ProjectFile/process/time_discretization/BackwardDifferentiationFormula/t_order.md b/Documentation/ProjectFile/parameter/Group/index_values/t_value.md
similarity index 100%
rename from Documentation/ProjectFile/process/time_discretization/BackwardDifferentiationFormula/t_order.md
rename to Documentation/ProjectFile/parameter/Group/index_values/t_value.md
diff --git a/Documentation/ProjectFile/process/time_discretization/BackwardEuler/c_BackwardEuler.md b/Documentation/ProjectFile/parameter/Group/index_values/t_values.md
similarity index 100%
rename from Documentation/ProjectFile/process/time_discretization/BackwardEuler/c_BackwardEuler.md
rename to Documentation/ProjectFile/parameter/Group/index_values/t_values.md
diff --git a/Documentation/ProjectFile/parameter/i_parameter.md b/Documentation/ProjectFile/parameter/c_parameter.md
similarity index 100%
rename from Documentation/ProjectFile/parameter/i_parameter.md
rename to Documentation/ProjectFile/parameter/c_parameter.md
diff --git a/Documentation/ProjectFile/process/time_discretization/CrankNicolson/c_CrankNicolson.md b/Documentation/ProjectFile/prj/mesh/a_axially_symmetric.md
similarity index 100%
rename from Documentation/ProjectFile/process/time_discretization/CrankNicolson/c_CrankNicolson.md
rename to Documentation/ProjectFile/prj/mesh/a_axially_symmetric.md
diff --git a/Documentation/ProjectFile/prj/mesh/i_mesh.md b/Documentation/ProjectFile/prj/mesh/i_mesh.md
new file mode 100644
index 0000000000000000000000000000000000000000..11ed78b9ec0b7e61c6f2e191a45b0cd5a8cb48f5
--- /dev/null
+++ b/Documentation/ProjectFile/prj/mesh/i_mesh.md
@@ -0,0 +1 @@
+Information about input mesh.
diff --git a/Documentation/ProjectFile/prj/t_mesh.md b/Documentation/ProjectFile/prj/t_mesh.md
deleted file mode 100644
index b7cefacbd935d4a60c4babf706aec64b51648a88..0000000000000000000000000000000000000000
--- a/Documentation/ProjectFile/prj/t_mesh.md
+++ /dev/null
@@ -1 +0,0 @@
-Info about mesh...
diff --git a/Documentation/ProjectFile/process/time_discretization/CrankNicolson/t_theta.md b/Documentation/ProjectFile/prj/time_loop/i_time_loop.md
similarity index 100%
rename from Documentation/ProjectFile/process/time_discretization/CrankNicolson/t_theta.md
rename to Documentation/ProjectFile/prj/time_loop/i_time_loop.md
diff --git a/Documentation/ProjectFile/process/time_discretization/ForwardEuler/c_ForwardEuler.md b/Documentation/ProjectFile/prj/time_loop/output/i_output.md
similarity index 100%
rename from Documentation/ProjectFile/process/time_discretization/ForwardEuler/c_ForwardEuler.md
rename to Documentation/ProjectFile/prj/time_loop/output/i_output.md
diff --git a/Documentation/ProjectFile/process/time_discretization/i_time_discretization.md b/Documentation/ProjectFile/prj/time_loop/output/t_output_iteration_results.md
similarity index 100%
rename from Documentation/ProjectFile/process/time_discretization/i_time_discretization.md
rename to Documentation/ProjectFile/prj/time_loop/output/t_output_iteration_results.md
diff --git a/Documentation/ProjectFile/process/time_discretization/t_type.md b/Documentation/ProjectFile/prj/time_loop/output/t_prefix.md
similarity index 100%
rename from Documentation/ProjectFile/process/time_discretization/t_type.md
rename to Documentation/ProjectFile/prj/time_loop/output/t_prefix.md
diff --git a/Documentation/ProjectFile/prj/time_loop/output/t_type.md b/Documentation/ProjectFile/prj/time_loop/output/t_type.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/output/t_type.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/prj/time_loop/output/timesteps/i_timesteps.md b/Documentation/ProjectFile/prj/time_loop/output/timesteps/i_timesteps.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/output/timesteps/i_timesteps.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/prj/time_loop/output/timesteps/pair/i_pair.md b/Documentation/ProjectFile/prj/time_loop/output/timesteps/pair/i_pair.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/output/timesteps/pair/i_pair.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/prj/time_loop/output/timesteps/pair/t_each_steps.md b/Documentation/ProjectFile/prj/time_loop/output/timesteps/pair/t_each_steps.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/output/timesteps/pair/t_each_steps.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/prj/time_loop/output/timesteps/pair/t_repeat.md b/Documentation/ProjectFile/prj/time_loop/output/timesteps/pair/t_repeat.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/output/timesteps/pair/t_repeat.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/prj/time_loop/processes/i_processes.md b/Documentation/ProjectFile/prj/time_loop/processes/i_processes.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/processes/i_processes.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/prj/time_loop/processes/process/a_ref.md b/Documentation/ProjectFile/prj/time_loop/processes/process/a_ref.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/processes/process/a_ref.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/process/convergence_criterion/DeltaX/c_DeltaX.md b/Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/DeltaX/c_DeltaX.md
similarity index 100%
rename from Documentation/ProjectFile/process/convergence_criterion/DeltaX/c_DeltaX.md
rename to Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/DeltaX/c_DeltaX.md
diff --git a/Documentation/ProjectFile/process/convergence_criterion/DeltaX/t_abstol.md b/Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/DeltaX/t_abstol.md
similarity index 100%
rename from Documentation/ProjectFile/process/convergence_criterion/DeltaX/t_abstol.md
rename to Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/DeltaX/t_abstol.md
diff --git a/Documentation/ProjectFile/process/convergence_criterion/DeltaX/t_norm_type.md b/Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/DeltaX/t_norm_type.md
similarity index 100%
rename from Documentation/ProjectFile/process/convergence_criterion/DeltaX/t_norm_type.md
rename to Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/DeltaX/t_norm_type.md
diff --git a/Documentation/ProjectFile/process/convergence_criterion/DeltaX/t_reltol.md b/Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/DeltaX/t_reltol.md
similarity index 100%
rename from Documentation/ProjectFile/process/convergence_criterion/DeltaX/t_reltol.md
rename to Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/DeltaX/t_reltol.md
diff --git a/Documentation/ProjectFile/process/convergence_criterion/PerComponentDeltaX/c_PerComponentDeltaX.md b/Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/PerComponentDeltaX/c_PerComponentDeltaX.md
similarity index 100%
rename from Documentation/ProjectFile/process/convergence_criterion/PerComponentDeltaX/c_PerComponentDeltaX.md
rename to Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/PerComponentDeltaX/c_PerComponentDeltaX.md
diff --git a/Documentation/ProjectFile/process/convergence_criterion/PerComponentDeltaX/t_abstols.md b/Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/PerComponentDeltaX/t_abstols.md
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rename from Documentation/ProjectFile/process/convergence_criterion/PerComponentDeltaX/t_abstols.md
rename to Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/PerComponentDeltaX/t_abstols.md
diff --git a/Documentation/ProjectFile/process/convergence_criterion/PerComponentDeltaX/t_norm_type.md b/Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/PerComponentDeltaX/t_norm_type.md
similarity index 100%
rename from Documentation/ProjectFile/process/convergence_criterion/PerComponentDeltaX/t_norm_type.md
rename to Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/PerComponentDeltaX/t_norm_type.md
diff --git a/Documentation/ProjectFile/process/convergence_criterion/PerComponentDeltaX/t_reltols.md b/Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/PerComponentDeltaX/t_reltols.md
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rename from Documentation/ProjectFile/process/convergence_criterion/PerComponentDeltaX/t_reltols.md
rename to Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/PerComponentDeltaX/t_reltols.md
diff --git a/Documentation/ProjectFile/process/convergence_criterion/PerComponentResidual/c_PerComponentResidual.md b/Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/PerComponentResidual/c_PerComponentResidual.md
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rename from Documentation/ProjectFile/process/convergence_criterion/PerComponentResidual/c_PerComponentResidual.md
rename to Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/PerComponentResidual/c_PerComponentResidual.md
diff --git a/Documentation/ProjectFile/process/convergence_criterion/PerComponentResidual/t_abstols.md b/Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/PerComponentResidual/t_abstols.md
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rename to Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/PerComponentResidual/t_abstols.md
diff --git a/Documentation/ProjectFile/process/convergence_criterion/PerComponentResidual/t_norm_type.md b/Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/PerComponentResidual/t_norm_type.md
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rename from Documentation/ProjectFile/process/convergence_criterion/PerComponentResidual/t_norm_type.md
rename to Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/PerComponentResidual/t_norm_type.md
diff --git a/Documentation/ProjectFile/process/convergence_criterion/PerComponentResidual/t_reltols.md b/Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/PerComponentResidual/t_reltols.md
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diff --git a/Documentation/ProjectFile/process/convergence_criterion/Residual/c_Residual.md b/Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/Residual/c_Residual.md
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diff --git a/Documentation/ProjectFile/process/convergence_criterion/Residual/t_abstol.md b/Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/Residual/t_abstol.md
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rename from Documentation/ProjectFile/process/convergence_criterion/Residual/t_abstol.md
rename to Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/Residual/t_abstol.md
diff --git a/Documentation/ProjectFile/process/convergence_criterion/Residual/t_norm_type.md b/Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/Residual/t_norm_type.md
similarity index 100%
rename from Documentation/ProjectFile/process/convergence_criterion/Residual/t_norm_type.md
rename to Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/Residual/t_norm_type.md
diff --git a/Documentation/ProjectFile/process/convergence_criterion/Residual/t_reltol.md b/Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/Residual/t_reltol.md
similarity index 100%
rename from Documentation/ProjectFile/process/convergence_criterion/Residual/t_reltol.md
rename to Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/Residual/t_reltol.md
diff --git a/Documentation/ProjectFile/process/convergence_criterion/i_convergence_criterion.md b/Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/i_convergence_criterion.md
similarity index 100%
rename from Documentation/ProjectFile/process/convergence_criterion/i_convergence_criterion.md
rename to Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/i_convergence_criterion.md
diff --git a/Documentation/ProjectFile/process/convergence_criterion/t_type.md b/Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/t_type.md
similarity index 100%
rename from Documentation/ProjectFile/process/convergence_criterion/t_type.md
rename to Documentation/ProjectFile/prj/time_loop/processes/process/convergence_criterion/t_type.md
diff --git a/Documentation/ProjectFile/prj/time_loop/processes/process/i_process.md b/Documentation/ProjectFile/prj/time_loop/processes/process/i_process.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/processes/process/i_process.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/prj/time_loop/processes/process/output/i_output.md b/Documentation/ProjectFile/prj/time_loop/processes/process/output/i_output.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/processes/process/output/i_output.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/prj/time_loop/processes/process/output/t_output_extrapolation_residuals.md b/Documentation/ProjectFile/prj/time_loop/processes/process/output/t_output_extrapolation_residuals.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/processes/process/output/t_output_extrapolation_residuals.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/prj/time_loop/processes/process/output/variables/i_variables.md b/Documentation/ProjectFile/prj/time_loop/processes/process/output/variables/i_variables.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/processes/process/output/variables/i_variables.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/prj/time_loop/processes/process/output/variables/t_variable.md b/Documentation/ProjectFile/prj/time_loop/processes/process/output/variables/t_variable.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/processes/process/output/variables/t_variable.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/prj/time_loop/processes/process/t_nonlinear_solver.md b/Documentation/ProjectFile/prj/time_loop/processes/process/t_nonlinear_solver.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/processes/process/t_nonlinear_solver.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/prj/time_loop/processes/process/time_discretization/BackwardDifferentiationFormula/c_BackwardDifferentiationFormula.md b/Documentation/ProjectFile/prj/time_loop/processes/process/time_discretization/BackwardDifferentiationFormula/c_BackwardDifferentiationFormula.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/processes/process/time_discretization/BackwardDifferentiationFormula/c_BackwardDifferentiationFormula.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/prj/time_loop/processes/process/time_discretization/BackwardDifferentiationFormula/t_order.md b/Documentation/ProjectFile/prj/time_loop/processes/process/time_discretization/BackwardDifferentiationFormula/t_order.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/processes/process/time_discretization/BackwardDifferentiationFormula/t_order.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/prj/time_loop/processes/process/time_discretization/BackwardEuler/c_BackwardEuler.md b/Documentation/ProjectFile/prj/time_loop/processes/process/time_discretization/BackwardEuler/c_BackwardEuler.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/processes/process/time_discretization/BackwardEuler/c_BackwardEuler.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/prj/time_loop/processes/process/time_discretization/CrankNicolson/c_CrankNicolson.md b/Documentation/ProjectFile/prj/time_loop/processes/process/time_discretization/CrankNicolson/c_CrankNicolson.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/processes/process/time_discretization/CrankNicolson/c_CrankNicolson.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/prj/time_loop/processes/process/time_discretization/CrankNicolson/t_theta.md b/Documentation/ProjectFile/prj/time_loop/processes/process/time_discretization/CrankNicolson/t_theta.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/processes/process/time_discretization/CrankNicolson/t_theta.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/prj/time_loop/processes/process/time_discretization/ForwardEuler/c_ForwardEuler.md b/Documentation/ProjectFile/prj/time_loop/processes/process/time_discretization/ForwardEuler/c_ForwardEuler.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/processes/process/time_discretization/ForwardEuler/c_ForwardEuler.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/prj/time_loop/processes/process/time_discretization/i_time_discretization.md b/Documentation/ProjectFile/prj/time_loop/processes/process/time_discretization/i_time_discretization.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/processes/process/time_discretization/i_time_discretization.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/prj/time_loop/processes/process/time_discretization/t_type.md b/Documentation/ProjectFile/prj/time_loop/processes/process/time_discretization/t_type.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/processes/process/time_discretization/t_type.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/prj/time_loop/time_stepping/FixedTimeStepping/c_FixedTimeStepping.md b/Documentation/ProjectFile/prj/time_loop/time_stepping/FixedTimeStepping/c_FixedTimeStepping.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/time_stepping/FixedTimeStepping/c_FixedTimeStepping.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/prj/time_loop/time_stepping/FixedTimeStepping/t_t_end.md b/Documentation/ProjectFile/prj/time_loop/time_stepping/FixedTimeStepping/t_t_end.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/time_stepping/FixedTimeStepping/t_t_end.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/prj/time_loop/time_stepping/FixedTimeStepping/t_t_initial.md b/Documentation/ProjectFile/prj/time_loop/time_stepping/FixedTimeStepping/t_t_initial.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/time_stepping/FixedTimeStepping/t_t_initial.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/prj/time_loop/time_stepping/FixedTimeStepping/timesteps/i_timesteps.md b/Documentation/ProjectFile/prj/time_loop/time_stepping/FixedTimeStepping/timesteps/i_timesteps.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/time_stepping/FixedTimeStepping/timesteps/i_timesteps.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/prj/time_loop/time_stepping/FixedTimeStepping/timesteps/pair/i_pair.md b/Documentation/ProjectFile/prj/time_loop/time_stepping/FixedTimeStepping/timesteps/pair/i_pair.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/time_stepping/FixedTimeStepping/timesteps/pair/i_pair.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/prj/time_loop/time_stepping/FixedTimeStepping/timesteps/pair/t_delta_t.md b/Documentation/ProjectFile/prj/time_loop/time_stepping/FixedTimeStepping/timesteps/pair/t_delta_t.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/time_stepping/FixedTimeStepping/timesteps/pair/t_delta_t.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/prj/time_loop/time_stepping/FixedTimeStepping/timesteps/pair/t_repeat.md b/Documentation/ProjectFile/prj/time_loop/time_stepping/FixedTimeStepping/timesteps/pair/t_repeat.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/time_stepping/FixedTimeStepping/timesteps/pair/t_repeat.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/prj/time_loop/time_stepping/SingleStep/c_SingleStep.md b/Documentation/ProjectFile/prj/time_loop/time_stepping/SingleStep/c_SingleStep.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/time_stepping/SingleStep/c_SingleStep.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/prj/time_loop/time_stepping/i_time_stepping.md b/Documentation/ProjectFile/prj/time_loop/time_stepping/i_time_stepping.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/time_stepping/i_time_stepping.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/prj/time_loop/time_stepping/t_type.md b/Documentation/ProjectFile/prj/time_loop/time_stepping/t_type.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/prj/time_loop/time_stepping/t_type.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/process/HEAT_CONDUCTION/c_HEAT_CONDUCTION.md b/Documentation/ProjectFile/process/HEAT_CONDUCTION/c_HEAT_CONDUCTION.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/process/HEAT_CONDUCTION/c_HEAT_CONDUCTION.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/process/HEAT_CONDUCTION/process_variables/i_process_variables.md b/Documentation/ProjectFile/process/HEAT_CONDUCTION/process_variables/i_process_variables.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/process/HEAT_CONDUCTION/process_variables/i_process_variables.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/process/HEAT_CONDUCTION/process_variables/t_process_variable.md b/Documentation/ProjectFile/process/HEAT_CONDUCTION/process_variables/t_process_variable.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/process/HEAT_CONDUCTION/process_variables/t_process_variable.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/process/HEAT_CONDUCTION/t_density.md b/Documentation/ProjectFile/process/HEAT_CONDUCTION/t_density.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/process/HEAT_CONDUCTION/t_density.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/process/HEAT_CONDUCTION/t_heat_capacity.md b/Documentation/ProjectFile/process/HEAT_CONDUCTION/t_heat_capacity.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/process/HEAT_CONDUCTION/t_heat_capacity.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/process/HEAT_CONDUCTION/t_thermal_conductivity.md b/Documentation/ProjectFile/process/HEAT_CONDUCTION/t_thermal_conductivity.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/process/HEAT_CONDUCTION/t_thermal_conductivity.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/process/SMALL_DEFORMATION/constitutive_relation/t_type.md b/Documentation/ProjectFile/process/SMALL_DEFORMATION/constitutive_relation/t_type.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/process/SMALL_DEFORMATION/constitutive_relation/t_type.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/process/calculatesurfaceflux/i_calculatesurfaceflux.md b/Documentation/ProjectFile/process/calculatesurfaceflux/i_calculatesurfaceflux.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/process/calculatesurfaceflux/i_calculatesurfaceflux.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/process/calculatesurfaceflux/t_mesh.md b/Documentation/ProjectFile/process/calculatesurfaceflux/t_mesh.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/process/calculatesurfaceflux/t_mesh.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/process/calculatesurfaceflux/t_output_mesh.md b/Documentation/ProjectFile/process/calculatesurfaceflux/t_output_mesh.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/process/calculatesurfaceflux/t_output_mesh.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/process/calculatesurfaceflux/t_property_name.md b/Documentation/ProjectFile/process/calculatesurfaceflux/t_property_name.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/process/calculatesurfaceflux/t_property_name.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/process/jacobian_assembler/i_jacobian_assembler.md b/Documentation/ProjectFile/process/jacobian_assembler/i_jacobian_assembler.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/process/jacobian_assembler/i_jacobian_assembler.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/process/jacobian_assembler/t_component_magnitudes.md b/Documentation/ProjectFile/process/jacobian_assembler/t_component_magnitudes.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/process/jacobian_assembler/t_component_magnitudes.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/process/jacobian_assembler/t_relative_epsilons.md b/Documentation/ProjectFile/process/jacobian_assembler/t_relative_epsilons.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/process/jacobian_assembler/t_relative_epsilons.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/process/jacobian_assembler/t_type.md b/Documentation/ProjectFile/process/jacobian_assembler/t_type.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/process/jacobian_assembler/t_type.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/Documentation/ProjectFile/process/t_name.md b/Documentation/ProjectFile/process/t_name.md
new file mode 100644
index 0000000000000000000000000000000000000000..576add64edccf5d980a0ff86143dc43a7109a788
--- /dev/null
+++ b/Documentation/ProjectFile/process/t_name.md
@@ -0,0 +1 @@
+\ogs_missing_documentation
diff --git a/MaterialLib/Fluid/Density/createFluidDensityModel.cpp b/MaterialLib/Fluid/Density/createFluidDensityModel.cpp
index bf7f23e3cacf6cb611562cb219bc521b8ce51c80..ec380411d0b468322e6fe28d327192635e941918 100644
--- a/MaterialLib/Fluid/Density/createFluidDensityModel.cpp
+++ b/MaterialLib/Fluid/Density/createFluidDensityModel.cpp
@@ -74,21 +74,17 @@ std::unique_ptr<FluidProperty> createFluidDensityModel(
if (type == "Constant")
{
return std::unique_ptr<FluidProperty>(new ConstantFluidProperty(
- //! \ogs_file_param{material__fluid__density__Constant_value}
+ //! \ogs_file_param{material__fluid__density__value}
config.getConfigParameter<double>("value")));
}
- //! \ogs_file_param{material__fluid__density__LiquidDensity}
else if (type == "LiquidDensity")
return createLiquidDensity(config);
-
- //! \ogs_file_param{material__fluid__density__TemperatureDependent}
else if (type == "TemperatureDependent")
return createLinearTemperatureDependentDensity(config);
- //! \ogs_file_param{material__fluid__density__IdealGasLaw}
else if (type == "IdealGasLaw")
{
- //! \ogs_file_param{material__fluid__density__IdealGasLaw__molar_mass}
return std::unique_ptr<FluidProperty>(
+ //! \ogs_file_param{material__fluid__density__IdealGasLaw__molar_mass}
new IdealGasLaw(config.getConfigParameter<double>("molar_mass")));
}
else
diff --git a/MaterialLib/Fluid/Viscosity/createViscosityModel.cpp b/MaterialLib/Fluid/Viscosity/createViscosityModel.cpp
index 2d82e0e66a21662b2d9d9417b2e04e6da5c3f860..3cc564b1c9742e033174f863f078f863845e604f 100644
--- a/MaterialLib/Fluid/Viscosity/createViscosityModel.cpp
+++ b/MaterialLib/Fluid/Viscosity/createViscosityModel.cpp
@@ -80,7 +80,7 @@ std::unique_ptr<FluidProperty> createViscosityModel(
{
INFO("Using Vogels model, which gives viscosity in SI unit, Pa s");
auto const fluid_type =
- //! \ogs_file_param{material__fluid__viscosity__Vogels__fluid_type}
+ //! \ogs_file_param{material__fluid__viscosity__Vogels__liquid_type}
config.getConfigParameter<std::string>("liquid_type");
if (fluid_type == "Water")
{
diff --git a/MaterialLib/SolidModels/CreateLinearElasticIsotropic.h b/MaterialLib/SolidModels/CreateLinearElasticIsotropic.h
index e968212edc52a9ec12b0fe755e73e93dfeea9415..9471731ebc3f90f62e50824af40be84dddabde9e 100644
--- a/MaterialLib/SolidModels/CreateLinearElasticIsotropic.h
+++ b/MaterialLib/SolidModels/CreateLinearElasticIsotropic.h
@@ -24,17 +24,20 @@ createLinearElasticIsotropic(
std::vector<std::unique_ptr<ProcessLib::ParameterBase>> const& parameters,
BaseLib::ConfigTree const& config)
{
+ //! \ogs_file_param{process__SMALL_DEFORMATION__constitutive_relation__type}
config.checkConfigParameter("type", "LinearElasticIsotropic");
DBUG("Create LinearElasticIsotropic material");
// Youngs modulus
auto& youngs_modulus = ProcessLib::findParameter<double>(
+ //! \ogs_file_param_special{process__SMALL_DEFORMATION__constitutive_relation__LinearElasticIsotropic__youngs_modulus}
config, "youngs_modulus", parameters, 1);
DBUG("Use '%s' as youngs_modulus parameter.", youngs_modulus.name.c_str());
// Poissons ratio
auto& poissons_ratio = ProcessLib::findParameter<double>(
+ //! \ogs_file_param_special{process__SMALL_DEFORMATION__constitutive_relation__LinearElasticIsotropic__poissons_ratio}
config, "poissons_ratio", parameters, 1);
DBUG("Use '%s' as poissons_ratio parameter.", poissons_ratio.name.c_str());
diff --git a/MaterialLib/SolidModels/CreateLubby2.h b/MaterialLib/SolidModels/CreateLubby2.h
index d06dad3c2e3be9fa054c65cc79332fa0afd516c4..14d05ebb05bb234a8e0c9a5331709f1028e83736 100644
--- a/MaterialLib/SolidModels/CreateLubby2.h
+++ b/MaterialLib/SolidModels/CreateLubby2.h
@@ -25,11 +25,13 @@ std::unique_ptr<MechanicsBase<DisplacementDim>> createLubby2(
std::vector<std::unique_ptr<ProcessLib::ParameterBase>> const& parameters,
BaseLib::ConfigTree const& config)
{
+ //! \ogs_file_param{process__SMALL_DEFORMATION__constitutive_relation__type}
config.checkConfigParameter("type", "Lubby2");
DBUG("Create Lubby2 material");
// Kelvin shear modulus.
auto& kelvin_shear_modulus = ProcessLib::findParameter<double>(
+ //! \ogs_file_param_special{process__SMALL_DEFORMATION__constitutive_relation__Lubby2__kelvin_shear_modulus}
config, "kelvin_shear_modulus", parameters, 1);
DBUG("Use '%s' as kelvin shear modulus parameter.",
@@ -37,6 +39,7 @@ std::unique_ptr<MechanicsBase<DisplacementDim>> createLubby2(
// Kelvin viscosity.
auto& kelvin_viscosity = ProcessLib::findParameter<double>(
+ //! \ogs_file_param_special{process__SMALL_DEFORMATION__constitutive_relation__Lubby2__kelvin_viscosity}
config, "kelvin_viscosity", parameters, 1);
DBUG("Use '%s' as kelvin viscosity parameter.",
@@ -44,6 +47,7 @@ std::unique_ptr<MechanicsBase<DisplacementDim>> createLubby2(
// Maxwell shear modulus.
auto& maxwell_shear_modulus = ProcessLib::findParameter<double>(
+ //! \ogs_file_param_special{process__SMALL_DEFORMATION__constitutive_relation__Lubby2__maxwell_shear_modulus}
config, "maxwell_shear_modulus", parameters, 1);
DBUG("Use '%s' as maxwell shear modulus parameter.",
@@ -51,6 +55,7 @@ std::unique_ptr<MechanicsBase<DisplacementDim>> createLubby2(
// Maxwell bulk modulus.
auto& maxwell_bulk_modulus = ProcessLib::findParameter<double>(
+ //! \ogs_file_param_special{process__SMALL_DEFORMATION__constitutive_relation__Lubby2__maxwell_bulk_modulus}
config, "maxwell_bulk_modulus", parameters, 1);
DBUG("Use '%s' as maxwell bulk modulus parameter.",
@@ -58,6 +63,7 @@ std::unique_ptr<MechanicsBase<DisplacementDim>> createLubby2(
// Maxwell viscosity.
auto& maxwell_viscosity = ProcessLib::findParameter<double>(
+ //! \ogs_file_param_special{process__SMALL_DEFORMATION__constitutive_relation__Lubby2__maxwell_viscosity}
config, "maxwell_viscosity", parameters, 1);
DBUG("Use '%s' as maxwell viscosity parameter.",
@@ -65,6 +71,7 @@ std::unique_ptr<MechanicsBase<DisplacementDim>> createLubby2(
// Dependency parameter for mK.
auto& dependency_parameter_mK = ProcessLib::findParameter<double>(
+ //! \ogs_file_param_special{process__SMALL_DEFORMATION__constitutive_relation__Lubby2__dependency_parameter_mk}
config, "dependency_parameter_mk", parameters, 1);
DBUG("Use '%s' as dependency parameter mK.",
@@ -72,6 +79,7 @@ std::unique_ptr<MechanicsBase<DisplacementDim>> createLubby2(
// Dependency parameter for mvK.
auto& dependency_parameter_mvK = ProcessLib::findParameter<double>(
+ //! \ogs_file_param_special{process__SMALL_DEFORMATION__constitutive_relation__Lubby2__dependency_parameter_mvk}
config, "dependency_parameter_mvk", parameters, 1);
DBUG("Use '%s' as dependency parameter mvK.",
@@ -79,6 +87,7 @@ std::unique_ptr<MechanicsBase<DisplacementDim>> createLubby2(
// Dependency parameter for mvM.
auto& dependency_parameter_mvM = ProcessLib::findParameter<double>(
+ //! \ogs_file_param_special{process__SMALL_DEFORMATION__constitutive_relation__Lubby2__dependency_parameter_mvm}
config, "dependency_parameter_mvm", parameters, 1);
DBUG("Use '%s' as dependency parameter mvM.",
diff --git a/NumLib/ODESolver/ConvergenceCriterion.cpp b/NumLib/ODESolver/ConvergenceCriterion.cpp
index 42191dc81cfc76931da4b918dc970f44f949aa20..ede0da8851c1998e02da763d21ba2e25a311f943 100644
--- a/NumLib/ODESolver/ConvergenceCriterion.cpp
+++ b/NumLib/ODESolver/ConvergenceCriterion.cpp
@@ -21,7 +21,7 @@ namespace NumLib
std::unique_ptr<ConvergenceCriterion> createConvergenceCriterion(
const BaseLib::ConfigTree& config)
{
- //! \ogs_file_param{process__convergence_criterion__type}
+ //! \ogs_file_param{prj__time_loop__processes__process__convergence_criterion__type}
auto const type = config.peekConfigParameter<std::string>("type");
if (type == "DeltaX") {
diff --git a/NumLib/ODESolver/ConvergenceCriterionDeltaX.cpp b/NumLib/ODESolver/ConvergenceCriterionDeltaX.cpp
index 8f903ee4996159874a297f3a20bf16b363f872be..a1dfe9e5c7fdeb224d5f1ff90bb089a27a6ff6fa 100644
--- a/NumLib/ODESolver/ConvergenceCriterionDeltaX.cpp
+++ b/NumLib/ODESolver/ConvergenceCriterionDeltaX.cpp
@@ -54,15 +54,15 @@ void ConvergenceCriterionDeltaX::checkDeltaX(const GlobalVector& minus_delta_x,
std::unique_ptr<ConvergenceCriterionDeltaX> createConvergenceCriterionDeltaX(
const BaseLib::ConfigTree& config)
{
- //! \ogs_file_param{process__convergence_criterion__type}
+ //! \ogs_file_param{prj__time_loop__processes__process__convergence_criterion__type}
config.checkConfigParameter("type", "DeltaX");
- //! \ogs_file_param{process__convergence_criterion__DeltaX__abstol}
+ //! \ogs_file_param{prj__time_loop__processes__process__convergence_criterion__DeltaX__abstol}
auto abstol = config.getConfigParameterOptional<double>("abstol");
- //! \ogs_file_param{process__convergence_criterion__DeltaX__reltol}
+ //! \ogs_file_param{prj__time_loop__processes__process__convergence_criterion__DeltaX__reltol}
auto reltol = config.getConfigParameterOptional<double>("reltol");
auto const norm_type_str =
- //! \ogs_file_param{process__convergence_criterion__DeltaX__norm_type}
+ //! \ogs_file_param{prj__time_loop__processes__process__convergence_criterion__DeltaX__norm_type}
config.getConfigParameter<std::string>("norm_type");
auto const norm_type = MathLib::convertStringToVecNormType(norm_type_str);
diff --git a/NumLib/ODESolver/ConvergenceCriterionPerComponentDeltaX.cpp b/NumLib/ODESolver/ConvergenceCriterionPerComponentDeltaX.cpp
index 6fac5ce794580a4eca4144cd4621c829238da9eb..35c4e826e90845c9d5623fcf2bc9e8cad223aad0 100644
--- a/NumLib/ODESolver/ConvergenceCriterionPerComponentDeltaX.cpp
+++ b/NumLib/ODESolver/ConvergenceCriterionPerComponentDeltaX.cpp
@@ -80,17 +80,17 @@ void ConvergenceCriterionPerComponentDeltaX::setDOFTable(
std::unique_ptr<ConvergenceCriterionPerComponentDeltaX>
createConvergenceCriterionPerComponentDeltaX(const BaseLib::ConfigTree& config)
{
- //! \ogs_file_param{process__convergence_criterion__type}
+ //! \ogs_file_param{prj__time_loop__processes__process__convergence_criterion__type}
config.checkConfigParameter("type", "PerComponentDeltaX");
auto abstols =
- //! \ogs_file_param{process__convergence_criterion__PerComponentDeltaX__abstols}
+ //! \ogs_file_param{prj__time_loop__processes__process__convergence_criterion__PerComponentDeltaX__abstols}
config.getConfigParameterOptional<std::vector<double>>("abstols");
auto reltols =
- //! \ogs_file_param{process__convergence_criterion__PerComponentDeltaX__reltols}
+ //! \ogs_file_param{prj__time_loop__processes__process__convergence_criterion__PerComponentDeltaX__reltols}
config.getConfigParameterOptional<std::vector<double>>("reltols");
auto const norm_type_str =
- //! \ogs_file_param{process__convergence_criterion__PerComponentDeltaX__norm_type}
+ //! \ogs_file_param{prj__time_loop__processes__process__convergence_criterion__PerComponentDeltaX__norm_type}
config.getConfigParameter<std::string>("norm_type");
if ((!abstols) && (!reltols))
diff --git a/NumLib/ODESolver/ConvergenceCriterionPerComponentResidual.cpp b/NumLib/ODESolver/ConvergenceCriterionPerComponentResidual.cpp
index 4b8cad55d9337c645828838242e7fb14a8f6f76e..db4199d117c7ba6c7eb50590c1ada6989c780cc8 100644
--- a/NumLib/ODESolver/ConvergenceCriterionPerComponentResidual.cpp
+++ b/NumLib/ODESolver/ConvergenceCriterionPerComponentResidual.cpp
@@ -90,17 +90,17 @@ std::unique_ptr<ConvergenceCriterionPerComponentResidual>
createConvergenceCriterionPerComponentResidual(
const BaseLib::ConfigTree& config)
{
- //! \ogs_file_param{process__convergence_criterion__type}
+ //! \ogs_file_param{prj__time_loop__processes__process__convergence_criterion__type}
config.checkConfigParameter("type", "PerComponentResidual");
auto abstols =
- //! \ogs_file_param{process__convergence_criterion__PerComponentResidual__abstols}
+ //! \ogs_file_param{prj__time_loop__processes__process__convergence_criterion__PerComponentResidual__abstols}
config.getConfigParameterOptional<std::vector<double>>("abstols");
auto reltols =
- //! \ogs_file_param{process__convergence_criterion__PerComponentResidual__reltols}
+ //! \ogs_file_param{prj__time_loop__processes__process__convergence_criterion__PerComponentResidual__reltols}
config.getConfigParameterOptional<std::vector<double>>("reltols");
auto const norm_type_str =
- //! \ogs_file_param{process__convergence_criterion__PerComponentResidual__norm_type}
+ //! \ogs_file_param{prj__time_loop__processes__process__convergence_criterion__PerComponentResidual__norm_type}
config.getConfigParameter<std::string>("norm_type");
if ((!abstols) && (!reltols))
diff --git a/NumLib/ODESolver/ConvergenceCriterionResidual.cpp b/NumLib/ODESolver/ConvergenceCriterionResidual.cpp
index 96a5b7c338ca6b5ba9e6449e3ccf790351e1bb22..04222e2be306ad3e1bebc2428320556e38c01ca1 100644
--- a/NumLib/ODESolver/ConvergenceCriterionResidual.cpp
+++ b/NumLib/ODESolver/ConvergenceCriterionResidual.cpp
@@ -58,15 +58,15 @@ void ConvergenceCriterionResidual::checkResidual(const GlobalVector& residual)
std::unique_ptr<ConvergenceCriterionResidual>
createConvergenceCriterionResidual(const BaseLib::ConfigTree& config)
{
- //! \ogs_file_param{process__convergence_criterion__type}
+ //! \ogs_file_param{prj__time_loop__processes__process__convergence_criterion__type}
config.checkConfigParameter("type", "Residual");
- //! \ogs_file_param{process__convergence_criterion__Residual__abstol}
+ //! \ogs_file_param{prj__time_loop__processes__process__convergence_criterion__Residual__abstol}
auto abstol = config.getConfigParameterOptional<double>("abstol");
- //! \ogs_file_param{process__convergence_criterion__Residual__reltol}
+ //! \ogs_file_param{prj__time_loop__processes__process__convergence_criterion__Residual__reltol}
auto reltol = config.getConfigParameterOptional<double>("reltol");
auto const norm_type_str =
- //! \ogs_file_param{process__convergence_criterion__Residual__norm_type}
+ //! \ogs_file_param{prj__time_loop__processes__process__convergence_criterion__Residual__norm_type}
config.getConfigParameter<std::string>("norm_type");
auto const norm_type = MathLib::convertStringToVecNormType(norm_type_str);
diff --git a/NumLib/ODESolver/TimeDiscretizationBuilder.cpp b/NumLib/ODESolver/TimeDiscretizationBuilder.cpp
index a347b2223aef3b54e58bdf04b01e79c510dfe957..fe572d1fa6933971ab888340fbd0f19ed469b97e 100644
--- a/NumLib/ODESolver/TimeDiscretizationBuilder.cpp
+++ b/NumLib/ODESolver/TimeDiscretizationBuilder.cpp
@@ -18,31 +18,31 @@ std::unique_ptr<TimeDiscretization> createTimeDiscretization(
{
using T = std::unique_ptr<TimeDiscretization>;
- //! \ogs_file_param{process__time_discretization__type}
+ //! \ogs_file_param{prj__time_loop__processes__process__time_discretization__type}
auto const type = config.getConfigParameter<std::string>("type");
if (type == "BackwardEuler")
{
- //! \ogs_file_param_special{process__time_discretization__BackwardEuler}
+ //! \ogs_file_param_special{prj__time_loop__processes__process__time_discretization__BackwardEuler}
using ConcreteTD = BackwardEuler;
return T(new ConcreteTD);
}
else if (type == "ForwardEuler")
{
- //! \ogs_file_param_special{process__time_discretization__ForwardEuler}
+ //! \ogs_file_param_special{prj__time_loop__processes__process__time_discretization__ForwardEuler}
using ConcreteTD = ForwardEuler;
return T(new ConcreteTD);
}
else if (type == "CrankNicolson")
{
- //! \ogs_file_param{process__time_discretization__CrankNicolson__theta}
+ //! \ogs_file_param{prj__time_loop__processes__process__time_discretization__CrankNicolson__theta}
auto const theta = config.getConfigParameter<double>("theta");
using ConcreteTD = CrankNicolson;
return T(new ConcreteTD(theta));
}
else if (type == "BackwardDifferentiationFormula")
{
- //! \ogs_file_param{process__time_discretization__BackwardDifferentiationFormula__order}
+ //! \ogs_file_param{prj__time_loop__processes__process__time_discretization__BackwardDifferentiationFormula__order}
auto const order = config.getConfigParameter<unsigned>("order");
using ConcreteTD = BackwardDifferentiationFormula;
return T(new ConcreteTD(order));
diff --git a/NumLib/TimeStepping/Algorithms/FixedTimeStepping.cpp b/NumLib/TimeStepping/Algorithms/FixedTimeStepping.cpp
index a852a5d3c727f2a611b25838d614ab6cc56fefc5..8376621268813f89c82341bd504833cfa647bc6f 100644
--- a/NumLib/TimeStepping/Algorithms/FixedTimeStepping.cpp
+++ b/NumLib/TimeStepping/Algorithms/FixedTimeStepping.cpp
@@ -36,14 +36,14 @@ FixedTimeStepping::FixedTimeStepping(double t0, double tn, double dt)
std::unique_ptr<ITimeStepAlgorithm>
FixedTimeStepping::newInstance(BaseLib::ConfigTree const& config)
{
- //! \ogs_file_param{prj__time_stepping__type}
+ //! \ogs_file_param{prj__time_loop__time_stepping__type}
config.checkConfigParameter("type", "FixedTimeStepping");
- //! \ogs_file_param{prj__time_stepping__FixedTimeStepping__t_initial}
+ //! \ogs_file_param{prj__time_loop__time_stepping__FixedTimeStepping__t_initial}
auto const t_initial = config.getConfigParameter<double>("t_initial");
- //! \ogs_file_param{prj__time_stepping__FixedTimeStepping__t_end}
+ //! \ogs_file_param{prj__time_loop__time_stepping__FixedTimeStepping__t_end}
auto const t_end = config.getConfigParameter<double>("t_end");
- //! \ogs_file_param{prj__time_stepping__FixedTimeStepping__timesteps}
+ //! \ogs_file_param{prj__time_loop__time_stepping__FixedTimeStepping__timesteps}
auto const delta_ts = config.getConfigSubtree("timesteps");
std::vector<double> timesteps;
@@ -51,16 +51,16 @@ FixedTimeStepping::newInstance(BaseLib::ConfigTree const& config)
double delta_t = 0.0;
// TODO: consider adding call "listNonEmpty" to config tree
- //! \ogs_file_param{prj__time_stepping__FixedTimeStepping__timesteps__pair}
+ //! \ogs_file_param{prj__time_loop__time_stepping__FixedTimeStepping__timesteps__pair}
auto const range = delta_ts.getConfigSubtreeList("pair");
if (range.begin() == range.end()) {
OGS_FATAL("no timesteps have been given");
}
for (auto const pair : range)
{
- //! \ogs_file_param{prj__time_stepping__FixedTimeStepping__timesteps__pair__repeat}
+ //! \ogs_file_param{prj__time_loop__time_stepping__FixedTimeStepping__timesteps__pair__repeat}
auto const repeat = pair.getConfigParameter<std::size_t>("repeat");
- //! \ogs_file_param{prj__time_stepping__FixedTimeStepping__timesteps__pair__delta_t}
+ //! \ogs_file_param{prj__time_loop__time_stepping__FixedTimeStepping__timesteps__pair__delta_t}
delta_t = pair.getConfigParameter<double>("delta_t");
if (repeat == 0) {
diff --git a/ProcessLib/CalculateSurfaceFlux/ParseCalculateSurfaceFluxData.cpp b/ProcessLib/CalculateSurfaceFlux/ParseCalculateSurfaceFluxData.cpp
index 3fbbf455a30ae6e1fd74f88d33452115a92c544a..1269639fc770ae19137edda4c4818228cf46e87a 100644
--- a/ProcessLib/CalculateSurfaceFlux/ParseCalculateSurfaceFluxData.cpp
+++ b/ProcessLib/CalculateSurfaceFlux/ParseCalculateSurfaceFluxData.cpp
@@ -23,14 +23,14 @@ void parseCalculateSurfaceFluxData(BaseLib::ConfigTree const& config,
return;
mesh_name =
- //! \ogs_file_attr{process__calculatesurfaceflux__mesh}
+ //! \ogs_file_param{process__calculatesurfaceflux__mesh}
calculatesurfaceflux_config->getConfigParameter<std::string>("mesh");
property_name =
- //! \ogs_file_attr{process__calculatesurfaceflux__property_name}
+ //! \ogs_file_param{process__calculatesurfaceflux__property_name}
calculatesurfaceflux_config->getConfigParameter<std::string>(
"property_name");
out_fname =
- //! \ogs_file_attr{process__calculatesurfaceflux__output_mesh}
+ //! \ogs_file_param{process__calculatesurfaceflux__output_mesh}
calculatesurfaceflux_config->getConfigParameter<std::string>(
"output_mesh");
}
diff --git a/ProcessLib/CentralDifferencesJacobianAssembler.cpp b/ProcessLib/CentralDifferencesJacobianAssembler.cpp
index e129d943c8da19335a98a752e13832dae2c4131b..24b02328aa664209ef8de6bb49bd4d5a502cf30b 100644
--- a/ProcessLib/CentralDifferencesJacobianAssembler.cpp
+++ b/ProcessLib/CentralDifferencesJacobianAssembler.cpp
@@ -130,11 +130,14 @@ void CentralDifferencesJacobianAssembler::assembleWithJacobian(
std::unique_ptr<CentralDifferencesJacobianAssembler>
createCentralDifferencesJacobianAssembler(BaseLib::ConfigTree const& config)
{
+ //! \ogs_file_param{process__jacobian_assembler__type}
config.checkConfigParameter("type", "CentralDifferences");
// TODO make non-optional.
+ //! \ogs_file_param{process__jacobian_assembler__relative_epsilons}
auto rel_eps = config.getConfigParameterOptional<std::vector<double>>(
"relative_epsilons");
+ //! \ogs_file_param{process__jacobian_assembler__component_magnitudes}
auto comp_mag = config.getConfigParameterOptional<std::vector<double>>(
"component_magnitudes");
diff --git a/ProcessLib/CreateJacobianAssembler.cpp b/ProcessLib/CreateJacobianAssembler.cpp
index d4b6788eab2fb6802aaafb02b0d7f328757965fe..d8ca0c5025a0ef9275bca6f1ff36ba44448e5964 100644
--- a/ProcessLib/CreateJacobianAssembler.cpp
+++ b/ProcessLib/CreateJacobianAssembler.cpp
@@ -22,6 +22,7 @@ std::unique_ptr<AbstractJacobianAssembler> createJacobianAssembler(
return std::unique_ptr<AbstractJacobianAssembler>(
new AnalyticalJacobianAssembler);
+ //! \ogs_file_param{process__jacobian_assembler__type}
auto const type = config->peekConfigParameter<std::string>("type");
if (type == "Analytical") {
diff --git a/ProcessLib/Output.cpp b/ProcessLib/Output.cpp
index 24c871b8f6a78fb7c1ff2441fc8e9fbd71fbf56c..a9b1c05ad2db08f9291021f796d0e2f6a60b6d5a 100644
--- a/ProcessLib/Output.cpp
+++ b/ProcessLib/Output.cpp
@@ -49,24 +49,24 @@ std::unique_ptr<Output> Output::
newInstance(const BaseLib::ConfigTree &config, std::string const& output_directory)
{
auto const output_iteration_results =
- //! \ogs_file_param{prj__output__output_iteration_results}
+ //! \ogs_file_param{prj__time_loop__output__output_iteration_results}
config.getConfigParameterOptional<bool>("output_iteration_results");
std::unique_ptr<Output> out{new Output{
BaseLib::joinPaths(output_directory,
- //! \ogs_file_param{prj__output__prefix}
+ //! \ogs_file_param{prj__time_loop__output__prefix}
config.getConfigParameter<std::string>("prefix")),
output_iteration_results ? *output_iteration_results : false}};
- //! \ogs_file_param{prj__output__timesteps}
+ //! \ogs_file_param{prj__time_loop__output__timesteps}
if (auto const timesteps = config.getConfigSubtreeOptional("timesteps"))
{
- //! \ogs_file_param{prj__output__timesteps__pair}
+ //! \ogs_file_param{prj__time_loop__output__timesteps__pair}
for (auto pair : timesteps->getConfigSubtreeList("pair"))
{
- //! \ogs_file_param{prj__output__timesteps__pair__repeat}
+ //! \ogs_file_param{prj__time_loop__output__timesteps__pair__repeat}
auto repeat = pair.getConfigParameter<unsigned>("repeat");
- //! \ogs_file_param{prj__output__timesteps__pair__each_steps}
+ //! \ogs_file_param{prj__time_loop__output__timesteps__pair__each_steps}
auto each_steps = pair.getConfigParameter<unsigned>("each_steps");
assert(repeat != 0 && each_steps != 0);
diff --git a/ProcessLib/Parameter/GroupBasedParameter.cpp b/ProcessLib/Parameter/GroupBasedParameter.cpp
index 7cca25ecce090f26de05d1b97423ea2144e60f35..5be4cb0da5fe411569a6bab452ae8ba13e82121a 100644
--- a/ProcessLib/Parameter/GroupBasedParameter.cpp
+++ b/ProcessLib/Parameter/GroupBasedParameter.cpp
@@ -22,7 +22,7 @@ std::unique_ptr<ParameterBase> createGroupBasedParameter(
config.checkConfigParameter("type", "Group");
// get a property vector of group IDs
- //! \ogs_file_param{parameter_Group__group_id_property}
+ //! \ogs_file_param{parameter__Group__group_id_property}
std::string const group_id_property_name = config.getConfigParameter<std::string>("group_id_property");
DBUG("Using group_id_property %s", group_id_property_name.c_str());
@@ -36,13 +36,13 @@ std::unique_ptr<ParameterBase> createGroupBasedParameter(
typedef std::vector<double> Values;
typedef std::pair<int, Values> Index_Values;
std::vector<Index_Values> vec_index_values;
- //! \ogs_file_param{parameter_Group__index_values}
+ //! \ogs_file_param{parameter__Group__index_values}
for (auto p : config.getConfigSubtreeList("index_values"))
{
- //! \ogs_file_param{parameter_Group__index_values__index}
+ //! \ogs_file_param{parameter__Group__index_values__index}
auto const index = p.getConfigParameter<int>("index");
{
- //! \ogs_file_param{parameter_Group__index_values__value}
+ //! \ogs_file_param{parameter__Group__index_values__value}
auto const value = p.getConfigParameterOptional<double>("value");
if (value)
@@ -54,7 +54,7 @@ std::unique_ptr<ParameterBase> createGroupBasedParameter(
}
// Value tag not available; continue with required values tag.
- //! \ogs_file_param{parameter_Group__index_values__values}
+ //! \ogs_file_param{parameter__Group__index_values__values}
Values const values = p.getConfigParameter<Values>("values");
if (values.empty())
diff --git a/ProcessLib/ProcessOutput.cpp b/ProcessLib/ProcessOutput.cpp
index 0bac1d2701bea3abd2c252b3b593e95a630a1e96..a4c4ad055f73a0c623bfc3abfc4afb19dd924bb5 100644
--- a/ProcessLib/ProcessOutput.cpp
+++ b/ProcessLib/ProcessOutput.cpp
@@ -17,10 +17,10 @@ namespace ProcessLib
ProcessOutput::ProcessOutput(BaseLib::ConfigTree const& output_config)
{
- //! \ogs_file_param{process__output__variables}
+ //! \ogs_file_param{prj__time_loop__processes__process__output__variables}
auto const out_vars = output_config.getConfigSubtree("variables");
- //! \ogs_file_param{process__output__variables__variable}
+ //! \ogs_file_param{prj__time_loop__processes__process__output__variables__variable}
for (auto out_var : out_vars.getConfigParameterList<std::string>("variable"))
{
if (output_variables.find(out_var) != output_variables.cend())
@@ -33,7 +33,7 @@ ProcessOutput::ProcessOutput(BaseLib::ConfigTree const& output_config)
}
if (auto out_resid =
- //! \ogs_file_param{process__output__output_extrapolation_residuals}
+ //! \ogs_file_param{prj__time_loop__processes__process__output__output_extrapolation_residuals}
output_config.getConfigParameterOptional<bool>("output_extrapolation_residuals"))
{
output_residuals = *out_resid;
diff --git a/ProcessLib/SmallDeformation/CreateSmallDeformationProcess.cpp b/ProcessLib/SmallDeformation/CreateSmallDeformationProcess.cpp
index ac6079963c9c01805d742e3c1d65a34612d90a44..4fa4be91509c0c8458f23a74643dd753f8f72d84 100644
--- a/ProcessLib/SmallDeformation/CreateSmallDeformationProcess.cpp
+++ b/ProcessLib/SmallDeformation/CreateSmallDeformationProcess.cpp
@@ -68,6 +68,7 @@ createSmallDeformationProcess(
config.getConfigSubtree("constitutive_relation");
auto const type =
+ //! \ogs_file_param{process__SMALL_DEFORMATION__constitutive_relation__type}
constitutive_relation_config.peekConfigParameter<std::string>("type");
std::unique_ptr<MaterialLib::Solids::MechanicsBase<DisplacementDim>>
diff --git a/ProcessLib/UncoupledProcessesTimeLoop.cpp b/ProcessLib/UncoupledProcessesTimeLoop.cpp
index 4324562487e93638e79968d3e1e167fa8f589066..aa5548d1a6c519be479558af526dd1f677b07da7 100644
--- a/ProcessLib/UncoupledProcessesTimeLoop.cpp
+++ b/ProcessLib/UncoupledProcessesTimeLoop.cpp
@@ -25,7 +25,7 @@ std::unique_ptr<NumLib::ITimeStepAlgorithm> createTimeStepper(
if (type == "SingleStep")
{
- //! \ogs_file_param_special{prj__time_stepping__SingleStep}
+ //! \ogs_file_param_special{prj__time_loop__time_stepping__SingleStep}
config.ignoreConfigParameter("type");
timestepper.reset(new NumLib::FixedTimeStepping(0.0, 1.0, 1.0));
}
@@ -282,8 +282,8 @@ std::vector<std::unique_ptr<SingleProcessData>> createPerProcessData(
processes, pcs_name,
"A process with the given name has not been defined.");
- //! \ogs_file_param{prj__time_loop__processes__process__nonlinear_solver}
auto const nl_slv_name =
+ //! \ogs_file_param{prj__time_loop__processes__process__nonlinear_solver}
pcs_config.getConfigParameter<std::string>("nonlinear_solver");
auto& nl_slv = *BaseLib::getOrError(
nonlinear_solvers, nl_slv_name,
@@ -298,8 +298,7 @@ std::vector<std::unique_ptr<SingleProcessData>> createPerProcessData(
pcs_config.getConfigSubtree("convergence_criterion"));
//! \ogs_file_param{prj__time_loop__processes__process__output}
- ProcessOutput process_output{
- pcs_config.getConfigSubtree("output")};
+ ProcessOutput process_output{pcs_config.getConfigSubtree("output")};
per_process_data.emplace_back(makeSingleProcessData(
nl_slv, pcs, std::move(time_disc), std::move(conv_crit),
@@ -321,16 +320,16 @@ std::unique_ptr<UncoupledProcessesTimeLoop> createUncoupledProcessesTimeLoop(
const std::map<std::string, std::unique_ptr<NumLib::NonlinearSolverBase>>&
nonlinear_solvers)
{
- //! \ogs_file_param{prj__time_loop__time_stepping}
auto timestepper =
+ //! \ogs_file_param{prj__time_loop__time_stepping}
createTimeStepper(config.getConfigSubtree("time_stepping"));
- //! \ogs_file_param{prj__time_loop__output}
auto output =
+ //! \ogs_file_param{prj__time_loop__output}
createOutput(config.getConfigSubtree("output"), output_directory);
- //! \ogs_file_param{prj__time_loop__processes}
auto per_process_data = createPerProcessData(
+ //! \ogs_file_param{prj__time_loop__processes}
config.getConfigSubtree("processes"), processes, nonlinear_solvers);
return std::unique_ptr<UncoupledProcessesTimeLoop>{
diff --git a/scripts/doc/append-xml-tags.py b/scripts/doc/append-xml-tags.py
index bdfc2b80514602135b5bd841ec9427ad177968ce..11f7a7a94fb59e72d9b6ee2a1a4d4e76b02b6254 100755
--- a/scripts/doc/append-xml-tags.py
+++ b/scripts/doc/append-xml-tags.py
@@ -36,7 +36,6 @@ docdir = os.path.join(docauxdir, "dox", "ProjectFile")
# used to expand documentation entry points to full xml tag paths
# that are used in the prj file.
tag_path_expansion_table = {
- "initial_condition": "process_variables.process_variable.initial_condition",
"boundary_condition": "process_variables.process_variable.boundary_conditions.boundary_condition",
"linear_solver": "linear_solvers.linear_solver",
"process": "processes.process",
diff --git a/scripts/doc/get-project-params.sh b/scripts/doc/get-project-params.sh
index ae826269461b66db7c0474046533063209508725..8f1e5bc5379024624d3a8a20327e2b6c973c1558 100755
--- a/scripts/doc/get-project-params.sh
+++ b/scripts/doc/get-project-params.sh
@@ -22,18 +22,19 @@ cat <<"EOF" \
--exclude-dir '.git' \
--exclude-dir 'Tests' \
--exclude 'ConfigTree*.*' \
- -f - -r -n -o $color \
+ -f - -r -n $color \
+ -A 2 \
| cut -c $((${#srcdir} + 2))-
//! \\ogs_file_\(param\|attr\){[A-Za-z_0-9]\+}\( \\todo .*\)\?$
//! \\ogs_file_special$
//! \\ogs_file_\(param\|attr\)_special{[A-Za-z_0-9]\+}\( \\todo .*\)\?$
-checkConfigParameter.*)
-getConfigAttribute.*)
-getConfigParameter.*)
-getConfigSubtree.*)
-ignoreConfigAttribute.*)
-ignoreConfigParameter.*)
-peekConfigParameter.*)
+checkConfigParameter[^)]*)\?
+getConfigAttribute[^)]*)\?
+getConfigParameter[^)]*)\?
+getConfigSubtree[^)]*)\?
+ignoreConfigAttribute[^)]*)\?
+ignoreConfigParameter[^)]*)\?
+peekConfigParameter[^)]*)\?
EOF
# format as table:
diff --git a/scripts/doc/linked-xml-file.py b/scripts/doc/linked-xml-file.py
index 521e7fe0e983c152c0f0679df0248b60b35b07ec..e5d00b9789115c045f5bde0e8c9fc0b811c96637 100755
--- a/scripts/doc/linked-xml-file.py
+++ b/scripts/doc/linked-xml-file.py
@@ -34,7 +34,6 @@ docauxdir = os.path.abspath(docauxdir)
outdir = os.path.join(docauxdir, "dox", "CTestProjectFiles")
tag_path_expansion_table = {
- "prj__process_variables__process_variable__initial_condition": "initial_condition",
"prj__process_variables__process_variable__boundary_conditions__boundary_condition": "boundary_condition",
"prj__linear_solvers__linear_solver": "linear_solver",
"prj__processes__process": "process",
diff --git a/scripts/doc/normalize-param-cache.py b/scripts/doc/normalize-param-cache.py
index bf82a526999e8ea67a24f388038b835b6aefd3c4..2175daf84cf73eb9ced8f9b9d11f35b0573b04b4 100755
--- a/scripts/doc/normalize-param-cache.py
+++ b/scripts/doc/normalize-param-cache.py
@@ -21,11 +21,73 @@ comment_special = re.compile(r"//! \\ogs_file(_param|_attr)?_special(\{[A-Za-z_0
# capture #5 is the parameter name
getter = re.compile(r'(get|check|ignore|peek)Config(Parameter|Attribute|Subtree)(List|Optional|All)?'
- +r'(<.*>)?'
- +r'\("([a-zA-Z_0-9:]+)"[,)]')
+ +r'\s*(<.*>)?'
+ +r'\s*\(\s*"([a-zA-Z_0-9:]+)"\s*[,)]')
getter_special = re.compile(r'(get|check|ignore|peek)Config(Parameter|Attribute|Subtree)(List|Optional|All)?'
- +r'(<.*>)?\(')
+ +r'\s*(<.*>)?\(')
+
+
+# merge lines belonging together from grep -A 2 output.
+def merge_lines(it):
+ buf = ""
+ buf_fn = ""
+ buf_lno = 0
+
+ for l in it:
+ l = l.strip()
+ if (not l) or l == "--":
+ # separator line
+ if buf_fn:
+ yield buf_fn, buf_lno, buf
+ buf = ""
+ buf_fn = ""
+ buf_lno = 0
+ else:
+ m = re.match("(.*)([:-])([0-9]+)([:-])(.*)$", l)
+ assert m
+ assert m.group(2) == m.group(4)
+ fn = m.group(1)
+ lno = int(m.group(3))
+ line = m.group(5)
+ msg = fn + m.group(2) + str(lno) + m.group(4) + line
+
+ # remove non-doxygen comments
+ line = re.sub('/\*[^!*].*\*/|/\*\*/', '', line)
+ line = re.sub("//[^!*].*|//$", "", line, 1)
+
+ if buf_fn:
+ if m.group(2) == ":":
+ # new location started, yield the old one
+ yield buf_fn, buf_lno, buf
+ buf = line
+ buf_fn = fn
+ buf_lno = lno
+ else:
+ # continuation line
+ assert buf_fn == fn
+ buf += " " + line
+ elif m.group(2) == ":":
+ buf = line
+ buf_fn = fn
+ buf_lno = lno
+ else:
+ # continuation line and empty buffer
+ pass
+
+ if buf_fn and (comment.search(line) or comment_special.search(line)):
+ # make sure nothing can be appended to doxygen comment lines
+ yield buf_fn, buf_lno, buf
+ buf = ""
+ buf_lno = 0
+ buf_fn = ""
+
+ if buf_fn:
+ yield buf_fn, buf_lno, buf
+
+ return
+ yield
+
state = "getter"
path = ""
@@ -34,16 +96,12 @@ line = ""
tag_path_comment = ""
param_or_attr_comment = ""
-for inline in sys.stdin:
+for inline in merge_lines(sys.stdin):
oldpath = path; oldlineno = lineno; oldline = line
-
- path, lineno, line = inline.split(":", 2)
+ path, lineno, line = inline
if path != oldpath: debug(path)
- line = line.strip()
- lineno = int(lineno)
-
m = comment.search(line)
if m:
if state != "getter":