commit 3a00638539972da1a4c1d67092b11045b2d10195
Merge: cde073d 66dda12
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Oct 6 16:19:32 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    * 'ff' of 141.65.6.106:ogs_sources:
      moved class SparseMatrixDOK into file SparseMatrixDOK.h and SparseMatrixDOK.cpp

commit cde073df14ade077d3490aae3d5ac94048d928bb
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Oct 6 16:19:11 2011 +0200

    Change version number.

commit 66dda12b535523288bf5829b7df045e52f0018b6
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Thu Oct 6 14:37:01 2011 +0200

    moved class SparseMatrixDOK into file SparseMatrixDOK.h and SparseMatrixDOK.cpp

commit e0acf35cbfef0eb197326ce5b4dab0df71da5400
Merge: 79837d5 3bb4942
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Oct 5 14:41:24 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    * 'ff' of 141.65.6.106:ogs_sources:
      removed geometric type COLUMN
      removed all remaining warnings from vtkvispipelineitem
      fixed a warning

commit 79837d5c51afb076b0df1d96c87ec1dbb6aa0ea4
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Oct 5 14:41:13 2011 +0200

    Changes smtp server.

commit 3bb4942ea0a8806554644ce76608137ab4662626
Merge: 9d14c54 d16a3db
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Wed Oct 5 13:57:08 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 9d14c54477f6796bc7fbe2d9e5647feb974ddc4c
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Wed Oct 5 13:56:42 2011 +0200

    removed geometric type COLUMN

commit ca3ef3f58ac9becaeac63c7a65ac2f96d6f15221
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Oct 5 11:52:49 2011 +0200

    Added python diff script from http://docs.python.org/library/difflib.html.

commit 8fc7690a48e2b17564fd0d6284c54aacd133d3a8
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Oct 5 11:49:49 2011 +0200

    Removed builtin cmake file compare

commit d16a3db2b8cdb516918c92f985b38b8a18fd5ad1
Merge: 296344e 71d62d0
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Wed Oct 5 11:20:50 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 296344e414eab998a5c997d3e9d79ea8ae7043af
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Wed Oct 5 11:20:40 2011 +0200

    removed all remaining warnings from vtkvispipelineitem

commit 71d62d0975547e078396c428ce1f4f5ae5c2aac5
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Oct 5 11:17:30 2011 +0200

    Reenable email notification after benchmark runs.

commit a2216d17b83218264736bd54dbb8b884147f635d
Merge: 98a0d8b cf21002
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Oct 5 10:32:15 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    * 'ff' of 141.65.6.106:ogs_sources:
      fixed compile error in BRNS and GEMS config
      fixed some warnings
      fixed a few warnings
      - made vector of connected nodes in class CNode private, wrote two access methods - substitutions of public access to CNode::connected_nodes

commit 98a0d8b7180927157bd96e84449a36825ec866ee
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Oct 5 10:32:02 2011 +0200

    bench_info.rb hopefully working now.

commit c8102445ae26ab407f74efd44e115dba3197367a
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Wed Oct 5 10:19:07 2011 +0200

    fixed a warning

commit 4fbd29d28ce0131dc7484149e5e7e60c5485a90b
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Wed Oct 5 10:06:21 2011 +0200

    fixed compile error in BRNS and GEMS config

commit 442960d504952e7b507eb0b99f0a95b53ac28734
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Wed Oct 5 09:53:55 2011 +0200

    fixed some warnings

commit cf21002a73233f151e8d665e77bdebeece99efd4
Merge: b9e69c6 4fbd29d
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Wed Oct 5 09:07:52 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit b9e69c67aa950f9a45f8dd098962f5ec59c628aa
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Wed Oct 5 09:07:37 2011 +0200

    fixed a few warnings

commit 35eeeaf9fcbc1cf7bdaa1896dea87d425c8a92be
Merge: b83393f 93bc1ed
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Wed Oct 5 08:30:56 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit b83393f428b748ee157c543f21632d86c3f1594a
Merge: 9e0d016 714eece
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Oct 4 16:27:40 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 9e0d016677a095276422455cfcfb39659c7d8c56
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Oct 4 16:26:01 2011 +0200

    - made vector of connected nodes in class CNode private, wrote two access methods
    - substitutions of public access to CNode::connected_nodes

commit 93bc1ed011ac86c412a936c728a474650182f791
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Oct 4 16:24:27 2011 +0200

    Take only 12 digits and more verbose output.

commit 4701217e4194cf63b7113089476f56820eebe35b
Merge: 17cc4a7 bdbb4bb
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Oct 4 15:43:37 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    * 'ff' of 141.65.6.106:ogs_sources:
      removed osg scene manager
      next try (again)
      next try fixing OSG bug

commit 17cc4a7e6edaf733d0070a00aefcc81e925d1195
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Oct 4 15:43:13 2011 +0200

    More verbose output when on the same revision.

commit bdbb4bbfe4ac38cc3492742cbd13738a776cdc7a
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Oct 4 15:39:16 2011 +0200

    removed osg scene manager

commit 00a29696af16a07b096e014bb54eb0019183d7f4
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Oct 4 15:32:55 2011 +0200

    next try (again)

commit 714eecee8e1c8139869307fe9203bbde64ca3d88
Merge: 03a1cac 1a38a56
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Oct 4 15:24:48 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 03a1cacae951dc6a36db6f42cd6fecc3ff9ec204
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Oct 4 15:24:43 2011 +0200

    next try fixing OSG bug

commit 1a38a56b7333c31b4f0c8968bc609d90000c7812
Merge: 00ace9f ff1e82f
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Oct 4 15:00:37 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    * 'ff' of 141.65.6.106:ogs_sources:
      removed OSG-related error (hopefully)
      split up VtkVisPipelineItem into two classes for better usability

commit 00ace9fd070d4e4f142dd2808c994dacbdddc087
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Oct 4 15:00:23 2011 +0200

    Fixed forgotten .revision on  bench_info.rb.

commit ff1e82f9a4bb6236f9bef2249618af1685e65ab9
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Oct 4 14:58:11 2011 +0200

    removed OSG-related error (hopefully)

commit 70f3b8caa7d84d43965e4c7ab149bd46e13c7f8a
Merge: 608826a 92fbf66
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Oct 4 14:27:01 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 608826a1a714a59a14f1216e96ce65850afefd5d
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Oct 4 14:26:53 2011 +0200

    split up VtkVisPipelineItem into two classes for better usability

commit 92fbf66b6bd9601d1ab6cc52c4162bc77b1c4bf9
Merge: 5bd9212 c0d3526
Author: git@dev2 <lars.bilke@ufz.de>
Date:   Tue Oct 4 13:14:27 2011 +0200

    Merge branch 'master' into ff

    Conflicts:
    	FEM/rf_REACT_GEM.cpp

commit c0d35267e6f8e59ae8ca0c05f2ff90a1f3b3a442
Merge: b7fecd9 95c408d
Author: git@dev2 <lars.bilke@ufz.de>
Date:   Tue Oct 4 13:11:50 2011 +0200

    Merge branch 'master' of /home/git/ogs_sources_svn

commit 088805dab204187b59ac9c797ae19a337e659224
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Oct 4 12:41:53 2011 +0200

    some small changes

commit 5bd9212383f0dcf615713d9d20a3cffb24528db1
Merge: ee063e8 088805d
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Oct 4 11:44:40 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit ee063e82cd3f45fc3528e04904dafcda50a1792b
Merge: 211fbac b9adece
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Oct 4 10:42:30 2011 +0200

    resolved conflicts

commit 211fbac295fe515019f274aae6c3b5626fe5718b
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Wed Sep 28 16:19:51 2011 +0200

    fixed by bug concerning combined scaling and translation of vispipeline-items

commit b9adecee9bb225c358a084d1cf61d5e63b517a39
Merge: 1c3c209 1404bf4
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Sep 27 17:13:56 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    * 'ff' of 141.65.6.106:ogs_sources:
      Fixed merge mistake.

commit 1c3c209494bec7198ba2103c6287a31472582b8c
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Sep 27 17:12:58 2011 +0200

    Fixed a bug concerning git commits in process benchmark.

commit 1404bf43ef70d1dfd7c90a1faa18f2809019b08f
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Sep 27 15:38:43 2011 +0200

    Fixed merge mistake.

commit 9b42e38ef79cbb232a6f6e29b6f06b16ce80783b
Merge: 2bd340d b7fecd9
Author: git@dev2 <lars.bilke@ufz.de>
Date:   Tue Sep 27 15:18:43 2011 +0200

    Merge branch 'master' into ff

    Conflicts:
    	FEM/rf_st_new.cpp
    	FEM/vtk.cpp
    	FileIO/OGSIOVer4.cpp

commit b7fecd986f7ec71d2c96c0d729babda562a8cfeb
Merge: 9764011 9c2d41b
Author: git@dev2 <lars.bilke@ufz.de>
Date:   Tue Sep 27 15:04:13 2011 +0200

    Merge branch 'master' of /home/git/ogs_sources_svn

commit 2bd340d3ab6d2bede1f4ce306107d32554208924
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Sep 27 11:19:20 2011 +0200

    Fixed a bug where XmlInterface does not compiled when QtXmlPatterns.lib is not existent.

    QXmlSchemaValidator depends on existence of QtXmlPatterns.lib and not on the Qt version.

commit c5105c2db7bb8e16e147116cab40a05b8d99415b
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Sep 27 10:57:49 2011 +0200

    modeltest.cpp is not needed for compiling

commit e337caeef7c237e289e2ec66fe8c71c0ae5492af
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Sep 27 09:06:46 2011 +0200

    Taking less digits to create the primary key on git commit in process benchmarks.

commit 95e8ab49080d43fbcd3f970cb95482c9fb9b6cf1
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Mon Sep 26 21:04:03 2011 +0200

    Fixed path.

commit 57e7bc07e012471c7ace9ad62241bf039013e09a
Merge: 3b278f5 3acf0ff
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Mon Sep 26 17:14:56 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    * 'ff' of 141.65.6.106:ogs_sources:
      - removed method X(), Y() and Z() from class CNode
      substituted fastpow(x,2) by x*x
      - made CNode::X(), CNode::Y() and CNode::Z() avaiable again
      fixed some warnings
      - removed methods X(), Y() and Z() from class CNode - please use instead method getData() to get a const access to the 	coordinates - many changes due to removing methods from class CNode

commit 3b278f554df4e9d52c6ffb5e509cdecb74d5757c
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Mon Sep 26 17:13:11 2011 +0200

    Adapted path.

commit bd3a4fe7892f8dee9aaabf76e5754bcec1e4ff5d
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Mon Sep 26 17:06:03 2011 +0200

    Moved all files belonging to process benchmark job to subdirectory.

commit 196c62f91a2792a9c632b2fe6235d3738933ac0b
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Mon Sep 26 17:47:28 2011 +0200

    Database migration scripts added.

commit 2a47b329fa4114909d41b45d22578a80282d5fe6
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Mon Sep 26 17:46:37 2011 +0200

    Process benchmarks script seems to work.

commit 3acf0ffb5916755b422c5b30a070d24d103c65f5
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Mon Sep 26 15:06:34 2011 +0200

    - removed method X(), Y() and Z() from class CNode

commit 0c95c996371613af1b5ccc730e8e25f21ce9b65b
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Mon Sep 26 12:16:33 2011 +0200

    Refactored ruby scripts which process the benchmark outputs.

    Added Git support.

commit 6de00330c3026cdcb43e76937695d45bdb3793ac
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Mon Sep 26 10:00:21 2011 +0200

    substituted fastpow(x,2) by x*x

commit b35ccc1d4c7a38716f95cbc5a7898f2db7fdc8a8
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Fri Sep 23 10:41:53 2011 +0200

    - made CNode::X(), CNode::Y() and CNode::Z() avaiable again

commit 84d1cddd19f194965a01ed7a67d90a0cbf81110b
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Fri Sep 23 09:35:16 2011 +0200

    fixed some warnings

commit 9208e164c12dd111b05aee535a91e185e4113395
Merge: 9d54ef7 506f0a8
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Fri Sep 23 08:29:24 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 9d54ef74c0032ce7d65c63d4a4423928d5031ccc
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Fri Sep 23 08:23:15 2011 +0200

    - removed methods X(), Y() and Z() from class CNode - please use instead method getData() to get a const access to the
    	coordinates
    - many changes due to removing methods from class CNode

commit 506f0a849505ef0a009081899a6c324df885e226
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Sep 21 15:30:08 2011 +0200

    CMake options created with OptionsRequires() are OFF by default.

commit 2799c0dc4d42c3a108703384d12b7e7cecf15ada
Merge: f671241 cbb652d
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Sep 21 15:01:46 2011 +0200

    Merge branch 'refactor/cmake-modules' into ff

    * refactor/cmake-modules:
      Refactored the OpenSG conversion.
      Release build configurations in scripts.
      Reset build configurations.
      Set default build type to Debug.
      Removed unnecessary #include "Configure.h".
      Delete CMake module because it exists already in CMake.
      Moved some CMake modules to cmake/.
      Moved some CMake modules to cmake/.
      Removed many entries in Base/Configure.h.in.
      Removed some CMake find scripts because they are in the new cmake-modules or are part of CMake itself (FindVTK.cmake).
      Getting rid of downloading FindGit.cmake because it is now part of CMake.
      Getting rid of unnecessary Visual Studio Solution extension.
      Getting rid of unnecessary Visual Studio Solution extension.
      Simplifying ADD_DEFINITIONS CMake calls.
      Using option_requires for dependent CMake options.
      Updated README for pushing.
      Added missing cmake module.
      Squashed 'cmake/' content from commit 6773a13f

commit f6712416399eca0b69c9d0b9f089e8209cbc9595
Merge: 7cad473 c370afb
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Wed Sep 21 14:57:17 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 7cad473248368e71f2bd9a76673519afce06e5c8
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Wed Sep 21 14:57:07 2011 +0200

    just some small changes

commit c370afbfa0848c7b145c1fa77cf1353dafec0281
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Wed Sep 21 12:50:19 2011 +0200

    fixed some include issues

commit 97a05059212017d38ffa30fe828ba01b8fa247b0
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Wed Sep 21 12:34:32 2011 +0200

    changes due to substitution of pow(x,some-integer) with MathLib::fastpow(x,some-integer) and pow(x,0.5) with sqrt(x)

commit 121c686726f3bb10b31b4131d8acb324190445c7
Merge: 79a149f 4d1133d
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Sep 20 18:20:25 2011 +0200

    resolved conflicts

commit 79a149fcff439b1a62e8e8234751f5a62a3b4cd7
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Sep 20 18:15:48 2011 +0200

    removed bug from gmsh-interface where meshing of stations within polygons located in other polygons would not work correctly. added creation auf quad tree and generation of steiner points to gmsh-interface, resulting in much more suitable meshes.

commit 4d1133dcb332c3673a303b2b4aef16beb71aaa5a
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Sep 20 16:52:35 2011 +0200

    - moved functionality from GMSH2MSH into GMSHInterface
    - changed signature of function FEMRead in order to make WW multi mesh read avaiable

commit f420e25b01ade7f76062b24f7543069b631e878a
Merge: 9513a38 0c64023
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Sep 20 12:11:51 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 9513a383f4d5a0a8479603878f3171b9308ec34c
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Sep 20 12:10:09 2011 +0200

    - substituted pow(x,some_integer) by MathLib::fastpow(x, some_integer) in FEM/rf_REACT_GEM.cpp
    - removed some useless warning message

commit 0c64023842963ae6a91dcf0c0f6326ecfeb08f1c
Merge: 02f1e34 567b603
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Sep 20 11:11:43 2011 +0200

    resolved conflict

commit 02f1e3471d8843c48ad8999dd2cae7f19a1f4a46
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Sep 20 11:09:04 2011 +0200

    included tranlation option into GUI; removed multi-mesh from FEM Read and re-inserted adding the mesh into global mesh vector into files0.cpp

commit 567b6038d544494b4e1540fc78155964f1ab3b0a
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Sep 20 07:30:01 2011 +0200

    - substituted pow(x,0.5) by sqrt(x) and pow(x,some_integer) by MathLib::fastpow(x, some_integer) in FEM/rf_msp_new.cpp and FEM/rf_pcs.cpp
    - changed warning message in FileIO/OGSIOVer4.cpp

commit d9de158fa2ade5a4718814e4eecebd8e9cc03c0f
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Mon Sep 19 13:22:23 2011 +0200

    - substituted pow(x,0.5) by sqrt(x) and pow(x,some_integer) by MathLib::fastpow(x, some_integer) in FEM/rf_mmp_new.cpp
    - fixed a small bug in VtkCompositeSelectionFilter.cpp

commit 0c60857040744e68a1427d823f8df2d046e8c933
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Mon Sep 19 12:12:38 2011 +0200

    substituted pow(x,0.5) by sqrt(x) and pow(x,some_integer) by MathLib::fastpow(x, some_integer) in the changed files

commit b013faa485ae7f4f92a7fba108a3d6f2ae03676b
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Fri Sep 16 13:46:30 2011 +0200

    - removed a bug from MathLib::fastpow
    - substituted pow(x,some-integer) by MathLib::fastpow(x,some-integer) and pow(x,0.5) by sqrt(x)

commit 2f186b65840e8951793bcea8ba9eb161672af49c
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Fri Sep 16 11:00:36 2011 +0200

    - substituted some pow(x,2) with x*x wich should be faster

commit 7c4ce896317d801a23311bdf1623c9c7a38f47a3
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Fri Sep 16 10:27:51 2011 +0200

    - removed method CNode::Coordinates() that made always a copy of the data
      - use instead CNode::getData() wich returns a constant double pointer
      -> that gives you a faster (read only) access to the data - in most cases
      you only need read only access
    - improved method that used previous CNode::Coordinates()
      [methods GetNodePoreVelocity, GetPhaseVolumeAtNode in class CKinReadt;
      method ReactDeactPlotFlagsToTec in class CKinReactData and
      method IncorporateBoundaryConditions in class CRFProcess]
    - made method CElem::GetGravityCenter const - users from outside are not able to
      make changes to the gravity center

    - the remaining changes are consequences of the previous changes

commit 7441b688bb60592c283c6b328a867f775c23d806
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Thu Sep 15 12:37:02 2011 +0200

    - fixed a warning in rfmat_cp.cpp (unused variable)
    - fixed a bug concerning parsing the path of the data under MS windows

commit 5ff58c7f9b05dee8df3d1b215c4463bebbe58867
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Thu Sep 15 10:36:34 2011 +0200

    fixed a bug in TetGenInterface detected by Ms compiler - I wonder why gcc does not detect it

commit 174950cbfbe832d8443c4f71d5b1a6b8631cf36a
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Wed Sep 14 16:20:16 2011 +0200

    added some comments to TetGenInterface.h

commit 7ff97240617aa591fb7191491c0602b6b97e9b1a
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Wed Sep 14 15:53:44 2011 +0200

    add tetgen mesh input class TetGenInterface - now we can read tetgen-node and tetgen-ele files

commit 0015947371df17bdbe7fb0fce325ea9d790a110a
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Sep 13 14:59:19 2011 +0200

    removed two warning from files0.cpp

commit 55593206e9509a131867c2484520305754dc9b5e
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Sep 13 14:55:37 2011 +0200

    - removed two warnings concerning return value in class Quadtree
    - the distance vector in class MeshNodesAlongPolyline now contains also the distances to the higer order nodes

commit b378a2c3b5544298355e5b8008e40aa1dfa08b9f
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Mon Sep 12 17:27:47 2011 +0200

    fixed a bug in function readNonBlankLineFromInputStream

commit 682bc1a0760dc65fa92b172e33133652becd5347
Merge: 77ede5e 0292a84
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Mon Sep 12 17:22:36 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 77ede5e0a14bf494d0daf5ad4d705924a1e502b1
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Mon Sep 12 17:21:19 2011 +0200

    mesh generation improvements
    class GEOLIB::Raster creates a Raster file from a surface description

commit cbb652d66a7e17c0d4b92186c04974088d2a63a1
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Fri Sep 9 11:52:55 2011 +0200

    Refactored the OpenSG conversion.

    Replace vtkOsgActor by vtkOsgConverter from https://github.com/bilke/pv_opensg_plugin.
    Removed many OpenSG-related #ifdefs. Removed OsgWidget because it was
    not used anymore.

commit fd82fb778a180354d5baea0e41f1e57de22e91b0
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Sep 8 15:40:51 2011 +0200

    Release build configurations in scripts.

commit 148b6985f119dcc258ac4126168d3acef7c3185d
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Sep 8 15:38:15 2011 +0200

    Reset build configurations.

commit 018d9b28c957831720b5ce8d64d7d0ca0761eda9
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Sep 8 15:36:27 2011 +0200

    Set default build type to Debug.

commit 5536a5d6812c7419df625d4c284122c96fa7771b
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Sep 8 15:11:10 2011 +0200

    Removed unnecessary #include "Configure.h".

commit c4e293696701b14356219db354ecd6170c2da68f
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Sep 8 14:09:10 2011 +0200

    Delete CMake module because it exists already in CMake.

commit 7f83656e23dc7d3518438f0d77b0ec4e197edcdd
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Sep 8 14:07:12 2011 +0200

    Moved some CMake modules to cmake/.

commit 1078abdde93422e3e75b0afcfc34237d631c27bb
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Sep 8 14:05:48 2011 +0200

    Moved some CMake modules to cmake/.

commit ff8f4b97ae874ad0b89e86798b5d0ef50bf966b0
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Sep 8 13:10:18 2011 +0200

    Removed many entries in Base/Configure.h.in.

    Replaced those entries with corresponding ADD_DEFINITIONS() calls. This
    will significantly reduce rebuilding when changing the configuration.

commit bfc8be191b709405046fbc23531c975583bb06fd
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Sep 8 11:52:05 2011 +0200

    Removed some CMake find scripts because they are in the new cmake-modules or are part of CMake itself (FindVTK.cmake).

commit 0f06908f6d06b0b4c88db291b998b4523ffc0f69
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Sep 8 11:23:12 2011 +0200

    Getting rid of downloading FindGit.cmake because it is now part of CMake.

commit 1f7e5971b8e515be78b5a4164d7d4313ae1dc0c9
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Sep 8 11:17:30 2011 +0200

    Getting rid of unnecessary Visual Studio Solution extension.

commit 6e00e67a52902b0163cb5dcadf90a0f557206111
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Sep 8 10:11:21 2011 +0200

    Getting rid of unnecessary Visual Studio Solution extension.

    Note: When merging this into the trunk also modify the build scripts.

commit 11aa61480026ea0b1c76c64d99206fe664512393
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Sep 8 10:05:24 2011 +0200

    Simplifying ADD_DEFINITIONS CMake calls.

commit 243b92c79dbc8ad02af836198922ea635e365076
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Sep 8 09:43:48 2011 +0200

    Using option_requires for dependent CMake options.

commit 9764011e35c9c1e783dd088dbbfbba0194604db3
Merge: 71eb281 b9c779c
Author: git@dev2 <lars.bilke@ufz.de>
Date:   Wed Sep 7 19:07:52 2011 +0200

    Merge branch 'master' of /home/git/ogs_sources_svn

    Conflicts:
    	CMakeLists.txt
    	FEM/files0.cpp
    	FEM/files0.h
    	FEM/rf_react.cpp
    	FileIO/readNonBlankLineFromInputStream.cpp

commit 48f854159fc985c86098635fd527e4c7227a846d
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Sep 7 18:37:46 2011 +0200

    Updated README for pushing.

commit 4b3d3072a1423433f5b35596a5e7791d97c676d8
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Sep 7 18:34:33 2011 +0200

    Added missing cmake module.

commit cd3e82475e5d36b16b2c77d10f9829574fabc989
Merge: 0292a84 7a1df8f
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Sep 7 18:29:09 2011 +0200

    Merge commit '7a1df8f6347b769b04c27555a040d1a08edb7d13' as 'cmake'

commit 7a1df8f6347b769b04c27555a040d1a08edb7d13
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Sep 7 18:29:09 2011 +0200

    Squashed 'cmake/' content from commit 6773a13f

    git-subtree-dir: cmake
    git-subtree-split: 6773a13f

commit 0292a842bdfdbcdf8deb395c798f6a0534f70528
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Sep 7 18:22:16 2011 +0200

    Fixing bad merge.

commit 71eb28125a952a31e1f20dc3e3ba2a0f8a1f0171
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Thu Sep 1 16:22:00 2011 +0200

    removed some dummy functions from files0.[h,cpp] and applied some changes to function signature
    fixed a bug in readNonBlankLineFromInputStream

commit 5f4c62a537e07c253046ae8f27900ab22f1c2b3e
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Thu Sep 1 14:51:39 2011 +0200

    fixed some file reading bug
    commented some test functions out

commit 9b676dfa569b258f0b8eb90185e9df987ff616ca
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Thu Sep 1 13:49:28 2011 +0200

    fixing a bug while fixing a bug ...

commit dc882128f07aded07c507bf20a21a9801a6cbb4b
Merge: 10e64f3 fa9fa3c
Author: git@dev2 <lars.bilke@ufz.de>
Date:   Thu Sep 1 13:39:00 2011 +0200

    Merge branch 'master' into ff

commit fa9fa3c051323824e69af3843ee4901f9450e1c8
Merge: 3a4e1ad 4c1d45a
Author: git@dev2 <lars.bilke@ufz.de>
Date:   Thu Sep 1 13:38:50 2011 +0200

    Merge branch 'master' of /home/git/ogs_sources_svn

commit 10e64f3591fd65d4f123e5730698a1f50bdfb806
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Thu Sep 1 13:36:21 2011 +0200

    fixed a bug while fixing a bug

commit 4047912cffab5f52f4125d0ab425f3a719068747
Merge: 3c6c639 4e32d30
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Thu Sep 1 13:19:36 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 3c6c63969f680b1d65951650c6a924c5190c465c
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Thu Sep 1 13:19:20 2011 +0200

    fixed some warnings

commit 4e32d302b2b691340b090aea3b0edb97e38f5f37
Merge: 2e4df70 3a4e1ad
Author: git@dev2 <lars.bilke@ufz.de>
Date:   Thu Sep 1 13:11:51 2011 +0200

    Merge branch 'master' into ff

commit 3a4e1ad9ceea86f3b2a293f70df5d0b025ebfd11
Merge: 7e6c4f1 38cd244
Author: git@dev2 <lars.bilke@ufz.de>
Date:   Thu Sep 1 13:11:31 2011 +0200

    Merge branch 'master' of /home/git/ogs_sources_svn

commit 2e4df70b172f3a92904fdc1a57b7f4ad9648f790
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Thu Sep 1 11:48:06 2011 +0200

    solved conflict

commit 5c8cd0bc0712a0ebfcc3719132892c318f614d01
Merge: 62b059f 49d5e57
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Thu Sep 1 11:44:51 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 62b059fccdf056fba828139bc3c4957575f0155b
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Thu Sep 1 11:44:08 2011 +0200

    removed a global variable from OGSIOVer4.cpp that was not introduced by me

commit f9b15d8466cd321f1e3e8d6985f17f8d8e8c5814
Merge: 9ed9c95 7367f72
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Thu Sep 1 11:26:52 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 9ed9c956860a20873c86fdc21a054afe1b6bc5b6
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Thu Sep 1 11:24:31 2011 +0200

    split files DistributionInfo.[h,cpp] into files DistributionInfo.[h,cpp] and
    LinearFunctionData.[h,cpp] - do not implement more than one class per file!

    fixed a warning in FileIO/GeoIO/Gmsh2GeoIO.cpp

commit 7e6c4f1cc316569a39e39fb5d60c3e43c2a2a6b1
Merge: aeabcf6 56d89e6
Author: git@dev2 <lars.bilke@ufz.de>
Date:   Thu Sep 1 10:51:36 2011 +0200

    Merge branch 'master' of /home/git/ogs_sources_svn

commit 49d5e57d7dc0f93dd25da7b5b3fde247d04c54f7
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu Sep 1 10:40:48 2011 +0200

    fixed a final warning

commit 7367f7238166622b7e9fd6db6a45a7a26a7b18ab
Merge: 27a0b09 3fabec6
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu Sep 1 10:23:28 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 27a0b09665c373b3506e4f2647c7e7bfb5c2af44
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu Sep 1 10:23:20 2011 +0200

    fixed some warnings

commit 3fabec69defe5157db95568b5a0d942a529fd671
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Sep 1 09:58:32 2011 +0200

    Fixed merge mistake.

commit 4c37b1c7c2fb0782083991ca84a5e34891ccfa28
Merge: a460d36 7e6c4f1
Author: git@dev2 <lars.bilke@ufz.de>
Date:   Thu Sep 1 10:53:45 2011 +0200

    Merge branch 'master' into ff

    Conflicts:
    	FEM/rf_bc_new.cpp

commit 1cf2ee23e178ebc0d0afcf28af9aa52c3cc17d83
Merge: 08ff693 aeabcf6
Author: git@dev2 <lars.bilke@ufz.de>
Date:   Thu Sep 1 09:55:41 2011 +0200

    Merge branch 'master' into ff

    Conflicts:
    	FEM/Eclipse.cpp
    	FEM/FEMEnums.h
    	FEM/fem_ele_std.cpp
    	FEM/matrix_class.cpp
    	FEM/matrix_class.h
    	FEM/pcs_dm.cpp
    	FEM/problem.cpp
    	FEM/rf_bc_new.cpp
    	FEM/rf_bc_new.h
    	FEM/rf_ic_new.h
    	FEM/rf_pcs.cpp
    	FEM/rf_react.cpp
    	FEM/rf_st_new.cpp
    	FileIO/FEMIO/GeoIO.cpp
    	MSH/msh_elem.cpp
    	MSH/msh_mesh.cpp
    	MSH/msh_mesh.h
    	MSH/msh_node.h
    	OGS/rf.cpp
    	Qt/DataView/MshTabWidget.cpp
    	Qt/Gui/mainwindow.cpp

commit a460d3652bdbe18fb39fead158eff98c225b5b8c
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Sep 1 09:17:54 2011 +0200

    Fixed merge conflict.

commit 4acadccb5297b334363b694ae9d1c9eaa1e71b81
Merge: 2cf53df 1cf2ee2
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Sep 1 09:16:14 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    * 'ff' of 141.65.6.106:ogs_sources: (65 commits)
      fixed linker problem
      fixed warnings in mshlayermapper
      * OGSMeshIO::loadMeshFromFile() - changed parameter from call by value to call by (const) reference - changed parameter name according to style guide
      fixed error concerning vtk texture filter
      Fixed some typos.
      added error message
      Reverting Wenqings changes from rev 9121. To configure with mpi run cmake like this: cmake -DOGS_FEM_MPI=ON -DCMAKE_C_COMPILER=/opt/openmpi-1.4.1/bin/mpicc -DCMAKE_CXX_COMPILER=/opt/openmpi-1.4.1/bin/mpic++ ..
      Another patch to 5.2 with a linear function input for IC, BC and ST
      Merge branch 'trunk'
      fixed a compilation error in Linux GUI. I cannot understand why it makes an error..
      Giving size_t type argument an initial value causes problem.
      fixed compilation errors
      Merge branch 'trunk'
      fixed compilation error in MSVC2010
      fixed a bug for a case that Qt is not used
      moved the FEFLOW interface in the old GUI to the new GUI. and some improvement such as importing geometry.
      Fixing lis config.
      Doing linking right (hopefully).
      Simplifying.
      Fix typo.
      ...

commit 2cf53df440062619e6c9cae171bb7d233926ce32
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Sep 1 09:16:10 2011 +0200

    should work on dev2

commit 08ff69384f6db44268d66573902a42d08a357b67
Merge: 9419d73 4cc5ea0
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Wed Aug 31 15:18:44 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 9419d73f58e561a7f4269ae5049931c064103294
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Wed Aug 31 15:18:25 2011 +0200

    fixed linker problem

commit 4cc5ea02786b9aa2e9724e9d1de3f840401322e3
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Wed Aug 31 11:52:23 2011 +0200

    fixed warnings in mshlayermapper

commit c14e15c0b8c75cd1e3df1bc8b21440ef412d2d07
Merge: 840879c 5e907ef
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Wed Aug 31 10:31:09 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 840879cd450532da4a722a06ba5e8235de5ac241
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Wed Aug 31 10:29:43 2011 +0200

    * OGSMeshIO::loadMeshFromFile()
    - changed parameter from call by value to call by (const) reference
    - changed parameter name according to style guide

    FileIO/OGSIOVer4.cpp
    * writeGLIFileV4()
    - fixed bug writing surface

    GEO/GEOObjects.cpp
    * GEOObjects::mergeGeometries()
    - added functionalities for merging surfaces

    MSHGEOTOOLS/ExtractMeshNodes.cpp
    * ExtractMeshNodes::getTopMeshNodesAlongPolylineAsPoints()
    - removed some debug output

commit 07f53beffdca9ce909f6fd54cea2621e39b776de
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Wed Aug 31 09:52:17 2011 +0200

    fixed error concerning vtk texture filter

commit aeabcf6a337b7729467e373a6ff74feecbababee
Merge: 86a39b9 cce436e
Author: git@dev2 <lars.bilke@ufz.de>
Date:   Tue Aug 30 18:07:53 2011 +0200

    Merged from svn

commit 5e907ef3aa1be0b4bbc458302a90b4a71989d932
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Aug 30 16:53:08 2011 +0200

    Fixed a crash which happened when a filter removed point and/or cell data.

commit 64baacd6d750db69245cd6b029ac874113255d51
Merge: a0a0317 0a95df1
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Aug 30 11:30:17 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit a0a03179ebacd721dddd3771bfa3731c39cb460f
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Aug 30 11:29:53 2011 +0200

    split up femcondition and derived classes

commit 0a95df1ea19365db27e4de71885ff262f11b4850
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Mon Aug 29 16:04:03 2011 +0200

    Disable process_benchmark_job.rb on non-svn checkouts.

commit f9ce297036f704e08478b4d301a1889092cec10d
Merge: 41011cc 9cd55b1
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Aug 24 14:08:48 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    * 'ff' of 141.65.6.106:ogs_sources:
      fixed all ff-related warnings
      modified visualisation of direct source terms; split up gridadapter and vtk-mesh-converter

commit 41011cc9f964210cd4f2c0ea1d99785d7cb4014d
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Aug 24 14:08:41 2011 +0200

    Maybe fixing packaging?

commit 9cd55b1e3bd1262b436d1ffc4718bc7608265892
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Wed Aug 24 08:37:14 2011 +0200

    fixed all ff-related warnings

commit 93fb7ccf177ba4494ed24134413dad7f91ae7e48
Merge: 06bc322 86bd0f4
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Aug 23 17:48:49 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 06bc3226958100a9df63be0d3d33ac187491df78
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Aug 23 17:48:19 2011 +0200

    modified visualisation of direct source terms; split up gridadapter and vtk-mesh-converter

commit 86bd0f48cd8faa105c3f5f4284bb8f726ab450d0
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Aug 23 10:49:50 2011 +0200

    ProcessorCount warning when not detectable.

commit 4b931b7ec2f53509b3cf7911bfb01d058263f66b
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Aug 23 10:42:31 2011 +0200

    ProcessorCount script from CMake 2.8.5 added.

commit 4f3529d1ef8946efbdca0b33fae000985cc437d9
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Aug 23 09:38:15 2011 +0200

    Deselecting a cell in 3d view when selecting (picking) outside of that object.

commit 745259666430af3a8b0c4350eb363572af9d2a8f
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Mon Aug 22 17:48:55 2011 +0200

    vtk contour filter is more or less working now

commit fb4623acb526082d450e39670a741080f04a3275
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Mon Aug 22 15:39:05 2011 +0200

    fixed linux casting problem

commit 6ff9ff5fed7f913ae8975e7ed8e8231788d1a5ff
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri Aug 19 16:37:04 2011 +0200

    fixed linux casting error

commit 166571148ebc6ff651eb8b8f26c17028708d3623
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri Aug 19 16:15:44 2011 +0200

    fixed small error

commit b575ca1721b0b90a62a1af6c47bd38cce82ce60e
Merge: 80efe5d 0f81578
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri Aug 19 16:06:28 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 80efe5d4ed8a17ec244b20182809f3d89350967b
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri Aug 19 16:06:03 2011 +0200

    added support for DIRECT source terms

commit 0f81578f89c9651590f8ba723af883f7382be65f
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Aug 16 12:53:58 2011 +0200

    small fix concerning the remove of source terms and initial conditions

commit d9cd16f60822f8ba09f5fec6c13d209b543f8599
Merge: fe18dfb 7e376ff
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Fri Aug 12 10:34:52 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit fe18dfb6eb5903fce580d377271ed7ca48817143
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Fri Aug 12 10:34:32 2011 +0200

    fixed an include issue

commit 7e376ffe0732642dac09a4d01378397755989d10
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Mon Aug 8 16:59:33 2011 +0200

    stations can now be integrated into geometry when exported into gmsh-geo-files

commit 4a941431a94fcd4a412fbf2dbf06cbada2edf567
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Mon Aug 8 12:30:25 2011 +0200

    implemented merge functionality into class GEOObjects

commit dffd81be4c0c564ec9499e2006e599d261636b98
Merge: c345601 4a94143
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Mon Aug 8 11:48:36 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit c3456017953dd096caa0c5e40a8ab98f4ca4d4d8
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Mon Aug 8 11:48:20 2011 +0200

    added contour filter

commit 37551b1a3afd7358d3d93cf4f2ff485ce40d6162
Merge: cc11ad2 ad4322a
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Aug 2 13:59:49 2011 +0200

    resolved conflict

commit cc11ad226322c1a1148649a9bbc80fd5fad641af
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Aug 2 13:53:00 2011 +0200

    flipped image on loadImage()

commit eb7f5423949189b79ea86e74c1e731310a57384f
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Mon Aug 1 11:46:02 2011 +0200

    changes in test function - should not have consequences to the GUI

commit ad4322a279611a6ca4d750aa3b7762241c7547d5
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Jul 7 16:56:46 2011 +0200

    Enable mirroring when loading raster files as poydata.

commit 219ced6b374c7e93de5a4b2f9ca2931fb8c24226
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Jul 7 14:16:47 2011 +0200

    OpenSG build scripts

commit 00365b940c30884be1f2ee23d801dbe28e13efe1
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Jul 7 13:50:04 2011 +0200

    OpenSG build scripts

commit 7457e7b3dd5f17c98917f051ed3268604af43a8f
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri Jul 1 15:26:25 2011 +0200

    material ids are now displayed in element view

commit 231e1d61701a1434b12b9cecade89eb5e7eee832
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu Jun 30 16:32:58 2011 +0200

    fixed error concerning normals in surface triangulation, fixed error concerning correct initialisation of station/borehole objects, geometry save routine to gmsh-geo-files is changed, allows now for holes in polygons, maybe there are some other minor changes...

commit c237f2cc2ea829f3e87091fe9b769767019d73e0
Merge: 0a31a3f 28f7fa1
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Jun 28 11:30:18 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 28f7fa133d723337486c44f4379a57697d7bc33e
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Jun 28 12:20:38 2011 +0200

    fixed bug in QuadTree::addPoint()

commit 0a31a3f14b32745a317db7155d0345eb0a768618
Merge: b50bab8 f1f882f
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Jun 28 10:32:07 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit b50bab84f6ea98ec1eece8c380629cf029a74cfc
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Jun 28 10:31:49 2011 +0200

    fixed issue with reading and writing borehole-dates in xml files

commit f1f882f2e78471a574aa60a3cbba29d7c8ebe0da
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Jun 28 10:24:48 2011 +0200

    forget to return the result from fastpow - fixed

commit 2f8cc02be807d74456f48ffb855083ef153a2ee9
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Jun 28 09:49:19 2011 +0200

    implemented a fastpow function and used it in QuadTree::addPoint

commit 0cc056e199b60b6a355f619e2fc7b97d0178511c
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Jun 28 09:18:13 2011 +0200

    Quadtree::addPoint: add test if quadtree contains the given point already

commit 66e160b664d1666a8dc56e88a1cb27e7260c20b7
Merge: 7c11a3b 2175706
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri Jun 24 14:22:21 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 7c11a3bddcb0f467af9615311dc38dfebb7cfbae
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri Jun 24 14:21:30 2011 +0200

    fixed a few warnings

commit 21757060626b15b181f21d8003f3ede3805d934b
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Fri Jun 24 12:59:26 2011 +0200

    Jetzt aber.

commit fcc5430c8f2a8bd2591f01b421092538520e1220
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Fri Jun 24 12:48:18 2011 +0200

    Ich weiss gar nicht was du hast, Karsten. Geht doch alles.

commit e180355442531b4cccc91496f2bd7bddb26e69c1
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri Jun 24 11:29:58 2011 +0200

    small change in cmakelists

commit 1c76b6c3b2f3dd863573974c90dc65af686c2410
Merge: 96ebcae ed7102d
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri Jun 24 11:03:34 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 96ebcaef08b3d368b62fa16d94eba997818fd533
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri Jun 24 11:03:08 2011 +0200

    moved diagram prefs to solve linux compile problem

commit ed7102d04f8e6ecffcc869b0502caae86d8816bc
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Jun 23 16:58:22 2011 +0200

    Added uic generated header file caused build time dependency

commit e591f7c86b39fed7386b2cc3b65d39c76010b324
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu Jun 23 16:28:03 2011 +0200

    fixed error in cmakelists

commit 1091fb970dfcf8ed560e01ca7d7c53d03f69c473
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu Jun 23 16:15:01 2011 +0200

    adjusted copy constructor for mesh class to be a correct copy-constructor in the c++ sense; fixed various memory issues with diagram view; added option that allows to add data to diagram view

commit 32ae88d25fa2bc7887b2fca1c33169e1d62d4afd
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Wed Jun 22 17:13:11 2011 +0200

    fixed errors in node removal during layer meshing, removed computation of minimum edge length in ConstructGrid

commit 4dc35a676d273ae2dbad127e129bdf302a4487b1
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Jun 21 17:03:55 2011 +0200

    added some documentation

commit b0dc3a16148b7a7b5890152979abd60bffb915db
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Jun 21 16:46:23 2011 +0200

    fixed some warnings

commit 600b51b11d7a2035b2c78d37f907ddffcac48875
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Jun 21 16:42:00 2011 +0200

    diagram view now allows selection which curves should be visualised, diagram view can be called from tools-menu

commit 6d961a181b3e115fa1e787cf90f2c91c00a54799
Merge: 1a0b737 8d264ae
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Jun 21 13:59:47 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 1a0b737fc100ba9eda739c508d5ea9f03fb6be7e
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Jun 21 12:47:46 2011 +0200

    adapted diagram view so files generated by logger db can be read (at least in principle)

commit 8d264aebc72d2188a0ce82b4a18db491bc40cb07
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Jun 21 08:48:15 2011 +0200

    fixed an include issue under windows

commit f71919eb614a11dd39826a6ae3793d036b424bb7
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Mon Jun 20 17:24:56 2011 +0200

    fixed include issue

commit 56169e54e3256caf45541af50dd6b1996cd156ba
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Mon Jun 20 15:53:27 2011 +0200

    fixed an include error

commit 086277ce6f45683b61e6da9d55d73e38563da64c
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Mon Jun 20 16:32:15 2011 +0200

    fixed error in class Polyline

commit ddd08d30011bc19d5e2e310cea259a601f82db74
Merge: 9987cc6 1a61e95
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Mon Jun 20 16:22:11 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    Conflicts:
    	FileIO/SHPInterface.cpp
    	GEO/PointVec.cpp

commit 9987cc6a39c270f29ef0f664d0b396ee795cebd5
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Mon Jun 20 14:53:58 2011 +0200

    - CBoundaryConditionsGroup::Set substituted GetNODOnSFC
    - SHPInterface: improved reading polylines
    - AxisAlignedBoundingBox: added parameter epsilon to method containsPoint
    - PointVec: corrected bug in id mapping
    - Polygon: using other constructor in method splitPolygonAtIntersection()
    - Surface and Triangle: changed attributes according to the style guide
    - CEdge: changed method name Length() -> getLength()
    - CFEMesh: added method computeMinEdgeLength()

commit 1a61e95be235ec3adfded42cd3350bebf5f9e1d2
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Fri Jun 17 16:51:39 2011 +0200

    Jenkins documentation builds with diagrams.

commit 33c1198f56237b687dc06331e3e6f5f36a4052a9
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Fri Jun 17 16:10:21 2011 +0200

    Fixed doxygen output path

commit a510996fa97629241832f6b4f4c3095e676d1495
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Fri Jun 17 15:48:43 2011 +0200

    Undo last commit. Fix potential latex-doxygen error

commit 71a564dc8520d14bc74448ea9c243abd868bd204
Merge: a348fe6 17f3b35
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Fri Jun 17 15:22:13 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    * 'ff' of 141.65.6.106:ogs_sources:
      fixed small error
      added missing files
      option added where in mesh layer mapping nodes located at NoData values will be removed from the mesh
      thresholding works for all scalar arrays now, order of nodes for meshsource has been changes in order to avoid inverted normals

commit a348fe635ddcd81f64eb17780d2379b770722b47
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Fri Jun 17 15:20:35 2011 +0200

    Enable doc generation on build_gui.sh

commit 038f602ee998a98c085103396a4ce3134b1eb5bd
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Fri Jun 17 15:15:27 2011 +0200

    New CMake option: DOCS_GENERATE_COLLABORATION_GRAPHS "Generate collaboration graphs.".

commit 9263a2cd6015de1229e89424b03dace108f3884a
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Fri Jun 17 14:51:50 2011 +0200

    Documentation is now a build target (doc).

    Moved doxygen configuration file and made it CMake-configurable.
    Two new CMake options are introduced:
     - DOCS_GENERATE_DIAGRAMS "Use the DOT tool to generate class diagrams."
     - DOCS_GENERATE_CALL_GRAPHS "Generate call dependency graphs."

    To generate the documentation build the doc target.

commit a795981dd65d4f24005f287198427f58725f171f
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Fri Jun 17 12:51:52 2011 +0200

    Doxygen mainpage. Brief set to first sentence.

commit fafb21a0a64d70ae6ee0e5949c25dec398f620d8
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Jun 16 14:59:20 2011 +0200

    Fixed some doxygen warnings

commit 86f6b9131791f2ae542b1b68c1da4b6ee117d117
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Jun 16 13:52:03 2011 +0200

    Documentation enhancements

commit 17f3b3521648d590b9f4b74076e2422a08a3b0a2
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu Jun 16 11:06:35 2011 +0200

    fixed small error

commit 4b31077126100c63a9725bd2537a88271ce15ceb
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu Jun 16 11:00:54 2011 +0200

    added missing files

commit ae75130d1b1418facb8d88e5653a50c6e7a79fd0
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu Jun 16 10:46:39 2011 +0200

    option added where in mesh layer mapping nodes located at NoData values will be removed from the mesh

commit 8e82fc6b6a61ef4c659fced47076151d581e617a
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Jun 14 17:48:46 2011 +0200

    thresholding works for all scalar arrays now, order of nodes for meshsource has been changes in order to avoid inverted normals

commit 39d967ab78013f9f0416710024a2b7caabae0de0
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Wed Jun 8 16:25:40 2011 +0200

    cleaned up changes

commit 9c15764e83f51ff5a540e0ec77ea5cb14f0e8f72
Merge: 3138103 eb3ac91
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Wed Jun 8 16:21:17 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 313810340eb591c784bba79be5469c3bfdedc834
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Wed Jun 8 16:20:58 2011 +0200

    fixed bug in index mapping of duplicate points, changed import of polylines in shp-interface so it is way faster now, fixed bug in gms-interface where ogs would crash when no valid object was found in file.

commit 86a39b9daa2b9c9368c90301a7d9299c92a5de3e
Merge: 4316df3 7081f35
Author: git@dev2 <lars.bilke@ufz.de>
Date:   Mon Jun 6 11:44:37 2011 +0200

    Merge branch 'master' of /home/git/ogs_sources_svn

commit eb3ac918bc1f2936492ed6cccafaa2edf82effd1
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Mon Jun 6 11:10:08 2011 +0200

    Fixed new warnings from svn trunk

commit 670990ac990a4a1cc883f41d5ddc9fdf733ac782
Merge: 91b3d7c 8109eff
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Mon Jun 6 10:45:39 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    * 'ff' of 141.65.6.106:ogs_sources:
      switch on the counting
      switch off the counting for now
      fixed compilation erros with gcc
      added Gauss point averaging method in extrapolation methods to support pyramid elements.
      supprot shape functions and integration rules of Pyramid elements in FEM assembler
      added shape functions and integration rules for Pyramid elements into mathlib
      added Pyramid elements to the mesh library and IO functions.
      renamed member variables of vec class for debugging purpose with MSVC2005. Some debug features are not available if variales and functions have the same name.
      never integer
      fixed a bug setting a linear solver type for FLUID_MOMENTUM.
      modified log messages about PARDISO
      don't create a file if no KinReaction data are loaded
      update version info
      for better visualization of RWPT
      fix
      fix
      Global PTC_FLOW and MASS_TRANSPORT COUPLING: a kind of new non-isothermal compositional gas flow which is far accurate that previous one
      Enabled FEM_LIS compilation on windows.
      Fix

commit 8109eff71d9348d54ffaf39f38b4c5431449ff53
Merge: d07abc8 86a39b9
Author: git@dev2 <lars.bilke@ufz.de>
Date:   Mon Jun 6 11:45:08 2011 +0200

    Merge branch 'master' into ff

commit 91b3d7c2078db825fe5c88f6a5c09195e5846601
Merge: 1c1fa5c d07abc8
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Mon Jun 6 09:11:14 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    * 'ff' of 141.65.6.106:ogs_sources:
      Fixed layer mapping bug

commit d07abc8dd6b510d0598050ba021aa064e8e3ed5e
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Wed Jun 1 11:23:10 2011 +0200

    Fixed layer mapping bug

commit 1c1fa5c820f2390480db67697a8b9f282f44548c
Merge: eafa677 87036b6
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Mon May 30 12:50:34 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    * 'ff' of 141.65.6.106:ogs_sources:
      fixed config error
      removed another bunch of using directives
      next batch of config errors
      added missing changes
      fixed some missed vars for various configurations
      removed using-directive from various header files

commit 87036b629a4e57bd104e65e0169d1e60cb12a95e
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri May 27 12:57:19 2011 +0200

    fixed config error

commit 39b25c42c3850f023405c469bfb041bf428391f3
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri May 27 12:51:43 2011 +0200

    removed another bunch of using directives

commit d33eb43832fa2d2e8e914707dcb9675b71a47131
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri May 27 12:07:23 2011 +0200

    next batch of config errors

commit 6ea63a7fe8c899c2c404af4cc42eb2fc80d55389
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri May 27 11:59:51 2011 +0200

    added missing changes

commit a02e22c8fa76ed74a69abba01e35ce0b8f0c5851
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri May 27 11:52:00 2011 +0200

    fixed some missed vars for various configurations

commit cc6ec34482fcfbd71168d09f3b1ecbb2cbc020ba
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri May 27 11:42:33 2011 +0200

    removed using-directive from various header files

commit eafa6777f6ca7aec1236b8bc8ae111462ecc8816
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu May 26 14:05:39 2011 +0200

    Added .gitattributes: enabled style hook for source files.

commit cc234c0662b9ffb230769e29d7ecfe1ccec33d41
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed May 25 15:59:17 2011 +0200

    Fixed warning.

commit eb9245fc9a9973dd49bc834e42678d72d816f454
Merge: b730586 1009d76
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed May 25 15:34:26 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    * 'ff' of 141.65.6.106:ogs_sources:
      - fixed memory leak in MathLib/AnalyticalGeometry.cpp - fixed memory leak in FileIO/OGSIOVer4.cpp - changes in triangulation of surfaces that are read by gli reading functions - changes in method Surfae::createSurface() - the given polygon is now split into simple polygons
      substituted class CPointData_DuMux with class PointDuMux PointDuMux is a well designed class that - is derived from GEOLIB::Point - has only private attributes - has const get methods for its attributes - has set methods for its attributes

commit b7305864909f11deae8dac06a29b26f53a54e92a
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed May 25 15:34:17 2011 +0200

    Added compiler warning -Woverloaded-virtual and fixed occuring warnings.

commit 1009d76a68cb36e6afdbdaad2c2a2fbf11a89d85
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Wed May 25 12:47:24 2011 +0200

    - fixed memory leak in MathLib/AnalyticalGeometry.cpp
    - fixed memory leak in FileIO/OGSIOVer4.cpp
    - changes in triangulation of surfaces that are read by gli reading functions
    - changes in method Surfae::createSurface() - the given polygon is now split into simple polygons

commit 61cfe464e38badd7ca8f2eb90e96b75942c56cd8
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue May 24 10:17:22 2011 +0200

    substituted class CPointData_DuMux with class PointDuMux
    PointDuMux is a well designed class that
    - is derived from GEOLIB::Point
    - has only private attributes
    - has const get methods for its attributes
    - has set methods for its attributes

commit b02ef20709f3299907edbd90c2e6d6822963dd11
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Mon May 23 15:12:55 2011 +0200

    file DUMUX.h / cpp
    - removed
       using namespace std;
      from DUMUX.h since this polutes the global name space
    - changes due to removing using name space std in DUMUX.cpp

commit 83f684265ffb9d89b5c44f912dd45df81355f70d
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Mon May 23 13:54:41 2011 +0200

    changed name of namespace Mesh_Group to MeshLib

commit 6c84618b5300ffe6133c79d905dc47fb0db6bbab
Merge: 9a2600a 2cf0294
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Mon May 23 13:25:39 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 9a2600af60c15764f0164189d823368cd2f36221
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Mon May 23 13:25:17 2011 +0200

    changed name of namespace MATHLIB to MathLib

commit 2cf029490bc7673122fc590098bb1886511406e8
Merge: 9cc6a2c 968cb83
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Mon May 23 11:33:42 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 9cc6a2c7aa8884369134f158c4e7ebceb4ecd236
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Mon May 23 11:33:22 2011 +0200

    changed output file format for particle files in random_walk

commit 968cb8388d3518c29b5452c24558f5c30a717b30
Merge: ea3fbf1 fbc9ecf
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Mon May 23 11:30:32 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit ea3fbf12d58989329a780f6492d95224760e7018
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Mon May 23 11:30:17 2011 +0200

    class CECLIPSEData
    - commented out method double CalculateDistanceBetween2Points(double Point1[3], double Point2[3])
      since we have already functions for computing distances between points (see function sqrDist ())
    - changed access to the coordinates from a mesh node (used existing and documented method
      CNode::getData() instead of the new introduced method CNode::GetCoordinates())

    class GEOObjects
    - changed signature of method appendPointVec()
    - changed implementation of method appendPointVec()

    class PointVec
    - changed signature of method push_back () that returns now a size_t
    - changed implementation of uniqueInsert

    class Polygon
    - added another constructor

    class CNode
    - removed method GetCoordinates() - use getData() instead

    class ExtractMeshNodes
    - added some documentation
    - changed signatur of getPolygonFromPolyline()
    - added some more methods

    class GEOModels
    - changes due to changes in class GEOObjects

commit fbc9ecf1eb333d66407bb4639beac82787bf21cc
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu May 19 13:56:48 2011 +0200

    removed some warnings

commit 8acc9da6440faef08fc3b2e26af3f97290c33c52
Merge: dee8111 23ae1a1
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu May 19 13:50:45 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit dee8111a081cbf9b617e863a69ad452bed004017
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu May 19 13:50:21 2011 +0200

    changes to msh-elem initialisation

commit 4316df309fbd4c93017952e182fceb8641856403
Merge: 10ae0b0 47bc2bb
Author: git@dev2 <lars.bilke@ufz.de>
Date:   Tue May 17 16:59:15 2011 +0200

    Merged with svn

commit 23ae1a12ea713353ef48e554883325939ac4930c
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue May 17 16:43:24 2011 +0200

    Fixed typo.

commit f0cf84ba212144bdeb092ffe9d7b31228f330bb6
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue May 17 16:26:58 2011 +0200

    Fixed some merge mistakes

commit f385e1a4f01f1994983178856f47a45b292b7f1d
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue May 17 16:12:58 2011 +0200

    Fixed some merge mistakes

commit 6492f86c2b7248e2bba9e3fbec4c4e6dd5a979e1
Merge: cc57158 4316df3
Author: git@dev2 <lars.bilke@ufz.de>
Date:   Tue May 17 17:03:04 2011 +0200

    Merged with svn

commit 0945059252553d7a5ea69c627bf36ed13cbc2abb
Merge: b7a9a18 cc57158
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue May 17 07:28:28 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit b7a9a1877ee3fe23e02478a092c824a955dcf53d
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue May 17 07:26:51 2011 +0200

    small change in ConvertGliToVTK

commit cc57158fdd327ef56361bf638fb6c50315527fb2
Merge: f4d00e0 fe6d367
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Mon May 16 10:13:00 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit f4d00e022b215c199df77a7fa5acdfb9367eb6a5
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Mon May 16 10:12:29 2011 +0200

    fixed a few bugs (element model, global super elevation, grid construction on vtkmesh conversion, etc.)

commit fe6d36734d13d181e0bc0dd7aaf77c7768e93ac7
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Mon May 16 09:36:17 2011 +0200

    included the header algorithm in ExtractMeshNodes

commit b7152209d45a0c1f18fc859b2a798c42dc8027b1
Merge: 83643b4 f532b12
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Mon May 16 09:14:32 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 83643b4008ed069d6e6fdfeee96ab53f93e41942
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Mon May 16 09:12:51 2011 +0200

    - moved class ExtractMeshNodes from UTL/MSHGEOTOOLS to MSHGEOTOOLS
    - some very small changes in OGSMeshIO and Polyline

commit f532b12d0117ecd8e80955be5450bbcb71c61b36
Merge: 7d057a2 7f0050d
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu May 12 14:38:45 2011 +0200

    Merged with origin ff

commit 7d057a21a29c1e92b8362943a2a20db0de24c875
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu May 12 14:36:02 2011 +0200

    Fixed wrong return type.

commit bb1a49ba9ed716419ff471492b0e1e5536fca28b
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu May 12 14:05:07 2011 +0200

    Fixed errors and warnings when using the clang compiler on mac.

commit 44b6184b8a985f24263a0372d08a709467e4d1ba
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu May 12 13:04:20 2011 +0200

    Fixed errors and warnings when using the clang compiler on mac.

commit 7f0050d2449b5dda66caa9ba5fa7bf53cff064db
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu May 12 09:50:15 2011 +0200

    small changes to mesh lib

commit 5142c60387e01912aa8bb5de7f05f96aaed6ccef
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Wed May 11 17:45:43 2011 +0200

    reversed some changes from last commit

commit 19ad0a62497862a458c09b2f2440c149732dd4b3
Merge: 101c86f d0a9007
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Wed May 11 16:17:51 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 101c86fa9ef9bdb4b5dafcb47449385bb0026b1b
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Wed May 11 16:17:34 2011 +0200

    element information is displayed upon picking, mesh view has been cleaned up

commit d0a9007e8fc27f6b885d83811cd51070b6ea3410
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed May 11 12:57:38 2011 +0200

    Automatic image generation of profiling results with gprof2dot.py script. Added timeout on benchmarks (30 minutes or 1 day->exceeding).

commit af497c8c02fb340416ac11bc15fb09079c872e6d
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Fri May 6 14:29:43 2011 +0200

    Added converter from gli to vtk (atm only points).

commit dfcb0e18222dd18a258af4ba6d056036064d650b
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Mon May 2 12:16:52 2011 +0200

    cleaned up code

commit 4666d2a8aa7efc705c9c650a138972a361e241e5
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Mon May 2 11:16:23 2011 +0200

    removed -selected- keyword in msh_node and all uses

commit a1fc60979878e260bfdad22ebc8250b8cf123a77
Merge: bb97a0f accbb62
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Fri Apr 29 09:43:12 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit bb97a0f3735740c1b4d754bcc8aa1e7defe04fcf
Merge: eb6defb 8ff3839
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Fri Apr 29 08:57:02 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit eb6defb532d66dbe146ba0796e392c0996553a6d
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Fri Apr 29 08:55:47 2011 +0200

    first step to exchange GetNODOnSFC using class GEOLIB::Surface

commit accbb62a80cd7faa9b11ea6ca0920a9efe598e93
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu Apr 28 15:47:10 2011 +0200

    Fixed a few warnings

commit 8ff3839f48f5bb012238b218b148f559427d9675
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu Apr 28 12:12:07 2011 +0200

    Cleaned up code for FEMCondition and derived classes

commit 3cdb429aab53210b1d225c69bbfaa9658c07d365
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Wed Apr 20 15:34:05 2011 +0200

    made OGSMeshIO::write() a static method
    removed CFEMesh::write method
    classes XMLInterface, MshTabWidget and function MSHWrite use now method FileIO::OGSMeshIO::write
    instead of method CFEMesh::write

commit 145996b150c1ff970aaada3eac447d6e6cf4fb5f
Merge: 5beccf4 10ae0b0
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Wed Apr 20 11:53:48 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 5beccf452d2b4fceb5a418e82fe680edb0e07f11
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Wed Apr 20 11:52:53 2011 +0200

    - rewrote the function for reading a non blank line from given input stream
      (GetLineFromFile1 -> readNonBlankLineFromInputStream)
    - substituted occurences of GetLineFromFile1 in read methods of CBoundaryCondition and
      CSourceTerm
    - wrote class ProcessIO that reads process info from files (used in read methods of
      CBoundaryCondition and CSourceTerm)
    - substituted part of read method of CBoundaryCondition (employing class GeoIO)

commit 10ae0b0258c489abe6c65df0db9ec3b619326c70
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Apr 19 12:37:21 2011 +0200

    Removed ogs de manual submodule

commit 38fe3e16209f86d4b7a090a0c5406653bbb3895d
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Apr 19 12:07:03 2011 +0200

    Bumped version number to 5.1.02

commit c5b5b9985e9491cf13a6ccd5a139e98d984d3055
Merge: b6cb31b ace3de9
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Apr 19 11:18:05 2011 +0200

    merge

commit b6cb31b4f4f6a0a3fe03d0c9b21398f4fb6bb441
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Apr 19 11:10:45 2011 +0200

    changes to conditionsource

commit 8bbbf52b70fcc81033eece5c7300f6823d0f7b1a
Merge: 742a549 ace3de9
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Apr 19 10:00:15 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit ace3de9357961c90099320f05a7f9b62f6025442
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Apr 19 08:58:23 2011 +0200

    fixed warnings

commit 742a5493b4d869a56030fcde122e71ce51330043
Merge: e5de11a f9ec710
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Apr 19 08:31:47 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit f9ec71034abed725beac6ab1c7a354a836149b3a
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Mon Apr 18 14:57:01 2011 +0200

    Removed vtk prefix when exporting to vtk because the right file ending is already appended.

commit ae43b4789e3ebe78485a3c075d962aa0044d4fe1
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Mon Apr 18 12:14:46 2011 +0200

    Fixed deadlock when clicking cancel on loading raster files

commit 614c031c1c262b69b2a4ed414935222cda56c722
Merge: bc2c74e b655e07
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Mon Apr 18 12:08:38 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    * 'ff' of 141.65.6.106:ogs_sources:
      fixed some warnings
      fixed some warnings
      fixed linux error
      scalar values for FEM conditions can now be displayed
      fixed some warnings
      Some refactoring
      Fixed find xyz arrays in LegacyVtkInterface
      Removed COutput dependency from LegacyVtkInterface
      Almost done with removing COutput dependency on LegacyVtkInterface. Only method COutput::GetPCS_ELE() needs to be replaced.
      Tidying up
      Compile fix for gems configuration
      Moved COutput class to its own file. Extracted legacy VTK output from COutput to FileIO/MeshIO/LegacyVtkInterface
      Legacy vtk output more conforming to the standard (http://www.vtk.org/VTK/img/file-formats.pdf). Output x,y,z point data as a vector.

commit e5de11ad5f716758060c4f7b0ca16c27c58357bc
Merge: 5676dd0 b655e07
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Mon Apr 18 07:38:32 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit b655e078b8aad4cd937289be46ac2a63154c58e1
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri Apr 15 17:09:07 2011 +0200

    fixed some warnings

commit 8001d89d424ff2afdc5491b47a1a2becd21559fd
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri Apr 15 17:04:10 2011 +0200

    fixed some warnings

commit 7c32933fe2c20f907f10b7433ec504fc2b0efcb3
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri Apr 15 16:49:08 2011 +0200

    fixed linux error

commit 5ec12d45f1ed3385f296b5c4b819e1b71305113d
Merge: fac61b1 1abb8dd
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri Apr 15 16:34:32 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit fac61b105cdab525d478caacf8c2dcc2a4d1ef53
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri Apr 15 16:34:15 2011 +0200

    scalar values for FEM conditions can now be displayed

commit 5676dd0587b48f475d06f03775643a2ffbcc67bd
Merge: b439dc8 1abb8dd
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Fri Apr 15 12:37:43 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit b439dc843e6bc8030f585e662a235f8eac9003b1
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Fri Apr 15 12:34:53 2011 +0200

    added switch OGS_USE_QT to Configure.h.in
    rf_bc_new.cpp: exit only when simulation code is executed (i.e. if OGS_USE_QT is not set)

commit 1abb8ddb93ea7aa8862e8eb7ef8fef9f101c2557
Merge: 82761b2 657e321
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Apr 14 17:19:09 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    * 'ff' of 141.65.6.106:ogs_sources:
      fixed some warnings

commit 657e3214a42aab516c34608ac9ab3c36d6fc864a
Merge: 5f582dc 0d6bc11
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Thu Apr 14 16:39:18 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    Conflicts:
    	Qt/DataView/ConditionModel.h

commit 5f582dc98ffaa5e6f4388df6f9b1b985db27bf9c
Merge: bb710a1 993ade6
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Thu Apr 14 16:30:36 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    Conflicts:
    	Qt/DataView/ConditionModel.cpp

commit 82761b22312d6d1db3930fe30c435d19254b0b33
Merge: 0d6bc11 1961304
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Apr 14 16:23:35 2011 +0200

    Merge branch 'refactor/vtk_output' into ff

    * refactor/vtk_output:
      Some refactoring
      Fixed find xyz arrays in LegacyVtkInterface
      Removed COutput dependency from LegacyVtkInterface
      Almost done with removing COutput dependency on LegacyVtkInterface. Only method COutput::GetPCS_ELE() needs to be replaced.
      Tidying up
      Compile fix for gems configuration
      Moved COutput class to its own file. Extracted legacy VTK output from COutput to FileIO/MeshIO/LegacyVtkInterface
      Legacy vtk output more conforming to the standard (http://www.vtk.org/VTK/img/file-formats.pdf). Output x,y,z point data as a vector.

commit bc2c74e5bb5d933a62a16fff80984c2457393c8f
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Apr 14 14:53:00 2011 +0200

    Global superelevation is preserved between application runs. Every new vtk source object automatically gets the factor set.

commit f8e8f50f312a0c8e5b00afb4373c2aad9ac04306
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Apr 14 14:18:01 2011 +0200

    Merged with origin ff

commit 0d6bc11df14c018ef8db6cd27d82a1137f671fac
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu Apr 14 12:52:32 2011 +0200

    fixed linux error

commit b125ac8a6f9341ad87ddffc01d065e399c7ae3b3
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu Apr 14 12:40:49 2011 +0200

    meshes can now be read and written from/to project files

commit e62101c0c52f2a9aec735683ca51b217faf19412
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Wed Apr 13 16:21:25 2011 +0200

    fixed linux error

commit 86755c1d08f3f72112730d33f28ba9f383a36131
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Wed Apr 13 15:58:06 2011 +0200

    linear conditions can be handled + various minor changes

commit da1cc01aee89112b95c7ab04d7a409a2fbd1dcd0
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Mon Apr 11 15:25:33 2011 +0200

    FEMConditions: constant and domain conditions work correct now for old and new files

commit 561939cd6b891b11b4af0f4b2e1d6f5d8bcb4794
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Mon Apr 11 11:31:33 2011 +0200

    some changes to IC class, and compatibility for reading old condition-files

commit 4a1e393a08758d46fed47aa3877f66f4dd0a3b47
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri Apr 8 14:40:02 2011 +0200

    corrected gms mesh import method

commit 78f095eced87a3c160b489676f6735171824757e
Merge: 9b91473 5f9ce93
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri Apr 8 14:24:05 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 9b914735e9e0d49c52f6126cb6d4ab873f30ea89
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri Apr 8 14:23:44 2011 +0200

    documentation and tweaking of condition model

commit 5f9ce93fee760cf5e8d077910a18a5f2cbc46e1f
Author: git@dev2 <lars.bilke@ufz.de>
Date:   Fri Apr 8 13:48:52 2011 +0200

    Fixed merge mistake

commit 9d59323eae1bdf3b15c2574164f1571fb2cca6cd
Merge: ad2e387 89b9630
Author: git@dev2 <lars.bilke@ufz.de>
Date:   Fri Apr 8 13:26:16 2011 +0200

    Merge branch 'master' into ff

commit 89b963096691084978b29d633f5d4a8aaa0a69c1
Merge: e2fde5d 1234010
Author: git@dev2 <lars.bilke@ufz.de>
Date:   Fri Apr 8 13:25:40 2011 +0200

    Merge branch 'master' of /home/git/ogs_sources_svn

commit 1234010836fab3ca72322a476d0a23b12821e94d
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Mar 17 13:07:59 2011 +0000

    Version 5.1.01 by Bastian Graupner

    git-svn-id: https://svn.ufz.de/svn/ogs/trunk/sources@8073 3895a583-e809-0410-9bb6-aa9463026377

commit ad2e3879d86246e33681c8bb0aee2b191ee481f6
Merge: 383054f 02797d9
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Fri Apr 8 10:38:13 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 383054f2a620f97b25db0c9559dfbedec18eddf0
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Fri Apr 8 10:37:55 2011 +0200

    Added a second cmake run to the windows build scripts. This fixes a Hudson link error

commit 02797d9f994e43406094285b57937c683b86a9d8
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri Apr 8 10:12:52 2011 +0200

    fixed a few warnings

commit fe72789245caf52c4a3362e11b2803ce97485065
Merge: fc3ec3c d07d28d
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri Apr 8 09:51:24 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit fc3ec3c5c397d2acf0321e6d8343f614a61c6754
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri Apr 8 09:51:09 2011 +0200

    fixed linux issue

commit d07d28d219ea7f10247d137ab4573635213ba522
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Fri Apr 8 09:48:30 2011 +0200

    Removed unneeded qualifier

commit 081dc9480f71518cc4ebb4bd5026d3d965cdd7a9
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Fri Apr 8 09:33:56 2011 +0200

    VtkVisPrefsDialog is now a member of the main window due to random crashes on linux and win when using deleteLater() or DeleteOnClose flag.

commit bb710a1a3bc4634d4e4580f2a2ed63116bc7e906
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Fri Apr 8 08:03:47 2011 +0200

    fixed some warnings

commit 993ade6eedc21fa0d4ea56aa313f287a71c14124
Merge: c44182d 6a2bffa
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Apr 7 16:29:33 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    * 'ff' of 141.65.6.106:ogs_sources:
      added missing file
      FEM Conditions are now correctly displayed in data views and render window

commit c44182d841e2da5f0d96e2c8d0480e43fbb9d330
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Apr 7 16:29:30 2011 +0200

    A hopefully working delete on close

commit 6a2bffa88028c785a6d63bda833295983cfa668e
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu Apr 7 16:13:54 2011 +0200

    added missing file

commit 1600ed146edfcd06964fd5d81f709625a1e8bf32
Merge: f98dc3e b069ff6
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu Apr 7 15:34:23 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit f98dc3eeaa8e43a4ed2ea22df1e03abab56b4e96
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu Apr 7 15:34:04 2011 +0200

    FEM Conditions are now correctly displayed in data views and render window

commit b069ff6537af1b5ff5cdf3612a682991a5ee108c
Merge: 9e0fe8d f45690b
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Apr 7 15:06:50 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    * 'ff' of 141.65.6.106:ogs_sources:
      removed serveral warnings (reported by cppcheck), reduced scope of variables, made some methods const-correct, removed unused variables in files - rf_kireact.cpp - rf_kinreact.h - msh_mesh.cpp - msh_mesh.h - mesh_edge.cpp (possible memory leak: velocity) - mesh_elem.cpp (possible memory leak: angle)

commit 9e0fe8dd0250fbdb8a68e4cfffb8b5d0b1fa7c3f
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Apr 7 15:05:03 2011 +0200

    Introduced an alternative mouse mode which is activated on holding the spacebar.

    When activated left clicks picks a cell on the actual selected vtk object and on right click it sets the cameras focal point (center of rotation) to tghe picked position.

commit f45690bdc465f740024a0398ca01bc72ee5e6e2b
Merge: 1997522 9795e5e
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Thu Apr 7 12:58:42 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 1997522f143520833d03b500e2316f3166ce9dfe
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Thu Apr 7 12:58:25 2011 +0200

    removed serveral warnings (reported by cppcheck), reduced scope of variables, made some methods const-correct, removed unused variables in files
    - rf_kireact.cpp
    - rf_kinreact.h
    - msh_mesh.cpp
    - msh_mesh.h
    - mesh_edge.cpp (possible memory leak: velocity)
    - mesh_elem.cpp (possible memory leak: angle)

commit 9795e5e1ea67c954e24c5879a6fb6329b773235b
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Apr 7 10:52:33 2011 +0200

    Close button VisPrefsDialog

commit 1e01d66ea3099342ccb69e0766752299c2f40c11
Merge: 9783d9e 80a9b5e
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Apr 7 10:31:42 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    * 'ff' of 141.65.6.106:ogs_sources:
      substituted GetNODOnPLY() with a new version (using the class GEOLIB::Polyline instead of CGLPolyline) in method CSourceTermGroup::SetPLY()

commit 1961304287e743533797cdce2361f74209ef49a1
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Apr 6 15:35:39 2011 +0200

    Some refactoring

commit d729af1b1334017bf19206d6fe33368b1e969a4c
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Apr 6 14:04:56 2011 +0200

    Fixed find xyz arrays in LegacyVtkInterface

commit 840202a68599b2da82f84d704af3f3bc22db787a
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Apr 6 10:14:51 2011 +0200

    Removed COutput dependency from LegacyVtkInterface

commit d51e1f297913fcd911a4a00825a73a5c51cfe3a2
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Apr 5 16:40:41 2011 +0200

    Almost done with removing COutput dependency on LegacyVtkInterface. Only method COutput::GetPCS_ELE() needs to be replaced.

commit 0585239702fd958512a5c378aff8a914e5beec8d
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Apr 5 15:30:56 2011 +0200

    Tidying up

commit ba3f9f5fb4c64c0897fcf41b68457b7348ff8576
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Apr 5 14:48:18 2011 +0200

    Compile fix for gems configuration

commit 80a9b5efeebbc1cac0ca475dc5ae749bd2ba616e
Merge: fd05f0e c8d50a0
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Apr 5 13:05:38 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    Conflicts:
    	Qt/DataView/CMakeLists.txt

commit fd05f0e555d65a2315706196100406eec7e18e59
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Apr 5 13:01:21 2011 +0200

    substituted GetNODOnPLY() with a new version (using the class GEOLIB::Polyline instead of CGLPolyline) in method
    CSourceTermGroup::SetPLY()

commit 2218af95f94ab547e8041c18fb76ba27792373b4
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Apr 5 12:58:21 2011 +0200

    Moved COutput class to its own file. Extracted legacy VTK output from COutput to FileIO/MeshIO/LegacyVtkInterface

commit e3e263f633afbd780fe9e8d073f23289db34ab63
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Mon Apr 4 15:43:42 2011 +0200

    Legacy vtk output more conforming to the standard (http://www.vtk.org/VTK/img/file-formats.pdf). Output x,y,z point data as a vector.

commit 9783d9ee168ad39e993159a288eb22b9c000aa0b
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Mon Apr 4 15:40:41 2011 +0200

    Force USE_NET_CDF when OGS_USE_QT is ON

commit c8d50a06db26456b720f05b4d8e28dfd27b0c755
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Mon Apr 4 11:55:24 2011 +0200

    Some fixed for the shapelib cmake inclusion

commit 64fe93b32eb7a0cf00cfeab4fab36363d703fb60
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Mon Apr 4 09:12:04 2011 +0200

    fixed syntax error

commit fad5c477d9aba314b305ef28f1423d3375f0f9e4
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri Apr 1 16:19:08 2011 +0200

    modified Conditionmodel to fit GeoTreeModel

commit 47f5767c863156a29254bb103e24e47c0ce313bf
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri Apr 1 12:40:36 2011 +0200

    a little more cleanup

commit 3ed384fd5c86d7e099c74545b49c3f28838d4176
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu Mar 31 15:56:03 2011 +0200

    cleaned up msh read some more

commit 62f2f25313a1a3e105d2bbd093dad87c4c5867d5
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu Mar 31 15:29:16 2011 +0200

    fixing TDiff benchmark

commit 100cf381682440386a4587070e5906dc54749732
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu Mar 31 14:58:24 2011 +0200

    trying to fix neverending benchmarks...

commit bef9521f19ad9e5fd3f74b27e88de5f5ed2b77cd
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu Mar 31 14:08:57 2011 +0200

    cleaned up code

commit 3a75334643dd30645a2691c9e1e4600d5a1a4742
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu Mar 31 10:10:01 2011 +0200

    fixed a few warnings

commit e7d9affd690a12c216d0e38edf426f5e578e0482
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Wed Mar 30 16:06:16 2011 +0200

    modified test such that test results match the computed results

commit d9150f4e5b0bb78b20bb58828a96e0686a68f2d6
Merge: d0b673b bcae3aa
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Wed Mar 30 15:44:52 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit d0b673beca5d972cdfe3babf4edbe64d5455a894
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Wed Mar 30 15:44:23 2011 +0200

    fixed some compile issues with GEMS and BRNS configuration

commit cfcd65c7ca021a7e828b1d0b5b38342048e07620
Merge: b5e1500 62e3334
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Wed Mar 30 14:17:44 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit b5e150066673e79dff4f37c05dea5caf06ac173a
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Wed Mar 30 14:17:25 2011 +0200

    added some functionality for searching mesh nodes and computing the corresponding area in 2D Meshes

    serveral changes concerning the classes MeshQuality*

    class CNode
    - changed data type of connected_elements from std::vector<long> to std::vector<size_t>
    - made the attribute connected_element private
    - changed name schema for attribute (connected_element -> _connected_element)

    GMSHInterface
    - stations outside of the bounding polygon will not be integrated into the mesh

commit bcae3aad459df50cd1d67b567602afacd3d16556
Merge: e301426 cfcd65c
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Mar 30 13:47:13 2011 +0200

    Merge branch 'ff' of 141.65.6.106:~/ogs_sources into ff

    * 'ff' of 141.65.6.106:~/ogs_sources:
      added some functionality for searching mesh nodes and computing the corresponding area in 2D Meshes
      substituted in COutput::NODWritePLYDataTEC the method call CFEMesh::GetNODOnPLY which used a CGLPolyline with CFEMesh::GetNODOnPLY that is using the new GEOLIB::Polyline
      added an implementation for the equi angle skew criterion for the prism case
      completed implementation of mesh quality criterion equi angle skew (for hexahedrons), improved the implementation of equi angle criterion for other element types

commit e3014266d6ee17a22721e218034350c54594f590
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Mar 30 13:45:22 2011 +0200

    Made shapelib, libtiff and libgeotiff optional for the Data Explorer. Now it only depends on Qt and VTK.

commit 62e3334b35b10d3406d7987cab07774bf44194e2
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Mar 29 12:39:21 2011 +0200

    When adding a filter the active scalar array is set to that of the parent or the desired scalar array which is set in VtkAlgorithmProperties.

commit 867b7836942513c373255d83b905542f4f591321
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Mar 29 11:07:28 2011 +0200

    Moved VisPrefsDialog to VtkVis

commit ab74747097a9bbce1b80d4b139ce146c4e01afa7
Merge: b8d24a3 18a4a5f
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Mar 29 10:17:14 2011 +0200

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit b8d24a36220ba721840379382dd40d3a5b7113f9
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Mar 29 10:16:56 2011 +0200

    fixed but in tubefilter

commit 18a4a5f4b78953d76595c80419a335f690c7015c
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Mon Mar 28 16:38:44 2011 +0200

    Global superelevation to visualisation settings dialog added.

commit 98445f7c9f44593ce59d74ec605bb85e09c326e9
Merge: 19c7c7d e2fde5d
Author: git@dev2 <lars.bilke@ufz.de>
Date:   Fri Mar 25 15:09:30 2011 +0100

    Merge branch 'master' into ff

commit e2fde5d51b59e509137ee1466b895ff52a6f11b3
Author: git@dev2 <lars.bilke@ufz.de>
Date:   Fri Mar 25 15:05:58 2011 +0100

    Added Gui manual as a git submodule under Qt/Gui/manual

commit 19c7c7de87b139dcf70d90a3f0af116ba677a655
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Mar 24 10:30:52 2011 +0100

    Removed some debug output

commit 3fd99941b3e1a76447bfed0fdf73dc2e6532856a
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Mar 23 16:33:00 2011 +0100

    Fix build

commit 06476deaf3180b1778ec05b0c8c7cae8b9737fbb
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Mar 23 14:32:56 2011 +0100

    Resetting the camera on loading / unloading can be switched off in the visualization settings. Subclassed QSlider to show the value as a tooltip

commit daec089fcbf01541c1fca4f87127c6857710cb4f
Merge: 5b96c9d 9bc942a
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Mar 22 07:33:43 2011 +0100

    Merge branch 'ff' of git@141.65.6.106:ogs_sources into ff

commit 5b96c9dd6d0c25225452ae850e989796f0a463a0
Merge: 0eda28e fe4a922
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Mon Mar 21 18:06:47 2011 +0100

    Merge branch 'ff' of git@141.65.6.106:ogs_sources into ff

commit 0eda28e1185ebb71c21afb3f9264162f854d1da6
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Mon Mar 21 18:06:38 2011 +0100

    substituted in COutput::NODWritePLYDataTEC the method call CFEMesh::GetNODOnPLY which used a
    CGLPolyline with CFEMesh::GetNODOnPLY that is using the new GEOLIB::Polyline

commit 9bc942ad9530d60fb287c577a20f7fa83e426eb7
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Mon Mar 21 17:43:46 2011 +0100

    Fixed linux gui build. Some configurations now need at least two cmake runs.

commit fe4a922230c19d13c38149e94fa7d304274c6992
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Mon Mar 21 16:58:31 2011 +0100

    OpenMP executable flag correctly set

commit e4036548246018a77961b033cc9c0c5088ba8f1f
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Mon Mar 21 16:14:22 2011 +0100

    Some CMake refactoring

commit 05c3160d559b8b3e5590c59758dad5e7962ae4fd
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Mon Mar 21 14:29:11 2011 +0100

    VtkToOsg converter can now batch convert

commit 8c4e94edee4d3867f1a644821cc72ffd2bbf7d27
Merge: da590ab 0e363eb
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Mon Mar 21 07:53:35 2011 +0100

    Merge branch 'ff' of git@141.65.6.106:ogs_sources into ff

commit da590ab095f72195b18e882b78ebd7ec98d32cdb
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Mon Mar 21 07:53:31 2011 +0100

    added an implementation for the equi angle skew criterion for the prism case

commit 2e594daaf027be39f8754fa076be6f75079a2763
Merge: 15552bd 693ab17
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Fri Mar 18 12:33:47 2011 +0100

    Merge branch 'ff' of git@141.65.6.106:ogs_sources into ff

commit 15552bd0657b361a1ae8175aed858caa39418ddd
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Fri Mar 18 12:33:33 2011 +0100

    completed implementation of mesh quality criterion equi angle skew (for hexahedrons),
    improved the implementation of equi angle criterion for other element types

commit 0e363ebac67ca48cd7a618ef1dd9a4eeff3221a0
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Fri Mar 18 12:09:59 2011 +0100

    Add filter dialog accepts double-clicks

commit aa870293bf8f4ad2f74eac7178caf1563a7b394f
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Fri Mar 18 11:55:08 2011 +0100

    Scalar arrays select box correctly saves the selected array

commit 693ab17aac103602fc4b787714e4069e14fbd2db
Merge: b144517 5b44c2b
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Fri Mar 18 11:18:46 2011 +0100

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    * 'ff' of 141.65.6.106:ogs_sources:
      threshold for mesh quality can be a random interval now

commit b144517aba68274dbeb5d5378645efebb4ae8ab3
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Fri Mar 18 11:18:37 2011 +0100

    Fixed more warnings

commit 5b44c2b90f2eb85c16576881388c4d0675bcbc01
Merge: f61eef4 6ccd308
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri Mar 18 11:09:30 2011 +0100

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit f61eef4362866e0b977fa06748818f9a92836e36
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri Mar 18 11:09:10 2011 +0100

    threshold for mesh quality can be a random interval now

commit 6ccd30868525c41d3ebf2632ca1199c677f45b30
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Fri Mar 18 10:45:19 2011 +0100

    Fixed many warnings

commit 7e45e6c4fcafceb06d687f73d177a5b1319d24b5
Merge: ebdeac6 0caeeb9
Author: git@dev2 <lars.bilke@ufz.de>
Date:   Fri Mar 18 10:43:34 2011 +0100

    Merged with master (tag 5.1.01 from svn trunk)

commit ebdeac6cb6cdbabf583d28eb80b3f94c35468832
Merge: 3843402 9636641
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Fri Mar 18 07:53:05 2011 +0100

    Merge branch 'ff' of git@141.65.6.106:ogs_sources into ff

commit 3843402bcea632064589056a6581efc4c99d9543
Merge: 1e6203c 27261bc
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Fri Mar 18 07:52:32 2011 +0100

    Merge branch 'ff' of git@141.65.6.106:ogs_sources into ff

    Conflicts:

    	MSH/MeshQualityNormalisedVolumes.cpp
    	MSH/MeshQualityNormalisedVolumes.h
    	Qt/VtkVis/VtkVisPipeline.cpp

commit 9636641360db295605c93d6766e40e85ee0cc918
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu Mar 17 17:29:26 2011 +0100

    fixed a few warnings

commit 1e6203cdbc67d001fa9547dcb88e7d1adbd9bc56
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Thu Mar 17 15:36:46 2011 +0100

    implemented new mesh quality criterion equi angle skew
    added a funcion to compute the angle between two edges

commit 0caeeb9e16414c99aaf43bb0fa68463128a6ffb7
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Mar 17 14:29:12 2011 +0000

    Moved libraries files to Libs folder

    git-svn-id: https://svn.ufz.de/svn/ogs/trunk/sources@8074 3895a583-e809-0410-9bb6-aa9463026377

commit 0df9bbda11ee27fd16859a1056a26a639ca85fc5
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu Mar 17 14:48:37 2011 +0100

    fixed bloody stupid bug with damn vs not recognising stupid upper case letters in dumb include commands

commit 27261bcba376b98ec5a3b3990158ab3411ee1af9
Merge: f08f4fa 7334c1b
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu Mar 17 14:31:04 2011 +0100

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit f08f4fafceaa1bd5a8d9a019fe02639ad7f6a05f
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu Mar 17 14:30:52 2011 +0100

    added mesh quality criterium based on area

commit e2feb299580c9defd168db7ce0cf67aeaaa18d96
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Mar 17 13:07:59 2011 +0000

    Version 5.1.01 by Bastian Graupner

    git-svn-id: https://svn.ufz.de/svn/ogs/trunk/sources@8073 3895a583-e809-0410-9bb6-aa9463026377

commit 7334c1bbaba5cdf2e7ff80cfe18df738a40e4c45
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Thu Mar 17 11:21:38 2011 +0100

    His excellency dev2, please build mpi configuration now

commit c5c2a9183e35d18cb84a9e1a6f927057da73d205
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Thu Mar 17 09:40:11 2011 +0100

    fix a compile issue under linux

commit ea492faa12c5a6e1b3179c0f64bd09cc8babd3d1
Merge: 1047ffd e83aa6f
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Thu Mar 17 09:33:20 2011 +0100

    Merge branch 'ff' of git@141.65.6.106:ogs_sources into ff

commit 1047ffd2f70d26a85d2e587813cc0b56bf9db845
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Thu Mar 17 09:33:16 2011 +0100

    fixed some compile issues under linux
    fixed a bug in method MeshQualityChecker::getHistogramm()

commit 344223045a9e92795cac1ec80c4f8c7756cbba93
Merge: d19c4e7 0c432ed
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Thu Mar 17 08:48:21 2011 +0100

    Merge branch 'ff' of git@141.65.6.106:ogs_sources into ff

commit d19c4e7ff94d0970191607a2d8be683b6f205381
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Thu Mar 17 08:48:14 2011 +0100

    modified class MeshQualityNormalisedVolumes - 1D and 2D elements are associated with values greater than 1

commit e83aa6f16918b1df190156baaee43eb687aee773
Merge: 2648bc4 0c432ed
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu Mar 17 08:27:45 2011 +0100

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 2648bc406c083d3132ff14bcba18b036e78d75ca
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu Mar 17 08:27:27 2011 +0100

    fixed error concerning M_PI under MSVS

commit 0c432ed8f53be03281ef76bf5d5e52510e67f506
Merge: e7c3b6a 097792c
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Mar 16 19:21:29 2011 +0100

    Merge branch 'ff' of git@141.65.6.106:ogs_sources into ff

    * 'ff' of git@141.65.6.106:ogs_sources:
      added mesh quality selection dialog

commit e7c3b6a104c8a5f39f16c8885e6ab5976592e496
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Mar 16 18:47:15 2011 +0100

    Finish build script fixes

commit ac0cfbee46620849265804e2028f7e8c1b4da7e5
Merge: cab9b1c 65306cb
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Mar 16 18:13:20 2011 +0100

    Merge branch 'ff' of git@141.65.6.106:ogs_sources into ff

    * 'ff' of git@141.65.6.106:ogs_sources:
      added #include <cmath> to Polygon.cpp
      fixed a bug in class EarClippingTriangulation
      fixed bugs in image-to-barchart-filter, apply-color-table-filter and MeshQualityNormalisedVolumes

commit cab9b1cf9171e6236ac579d5ffcf7b7521b51756
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Mar 16 18:13:11 2011 +0100

    Fixed lis, mkl and mpi build configuration

commit 097792cdf2b590ec3c769d44fb043b1c1e0e7735
Merge: 92afaa9 ac0cfbe
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Wed Mar 16 17:23:07 2011 +0100

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 92afaa9752190116a5643f642d5f4feec41cb27c
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Wed Mar 16 17:22:51 2011 +0100

    added mesh quality selection dialog

commit 65306cb414b4c512a8185fd912b22357bda4bd71
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Wed Mar 16 16:46:48 2011 +0100

    added #include <cmath> to Polygon.cpp

commit cb7fd18c8448dfe9f98e08d9cb6a042680ae9b15
Merge: a464fcc 00376a8
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Wed Mar 16 16:09:59 2011 +0100

    Merge branch 'ff' of git@141.65.6.106:ogs_sources into ff

commit a464fccae87bd0c625f3b10ee0836b37a3cf3515
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Wed Mar 16 16:09:46 2011 +0100

    fixed a bug in class EarClippingTriangulation
    fixed a bug in class LinearInterpolation (removed wrong boundary check)
    added function createPolygonFromCircle (see Polygon.h)
    eliminated CFEMesh::GetNODOnPLY() calls at serveral places

commit 51df8fb390858949e4d3a9711b7590d8fa05a01c
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Mar 16 12:34:51 2011 +0100

    Fixed MKL build. Added a second CMake run to build_configs.sh because this is required at least for MKL configuration

commit 00376a8281a41820c551ec356c822d0a4163a979
Merge: ea98bc9 51df8fb
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Wed Mar 16 12:20:06 2011 +0100

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit ea98bc9c599c5612ff3cfd840b6c12da3b4d47a8
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Wed Mar 16 12:19:49 2011 +0100

    fixed bugs in image-to-barchart-filter, apply-color-table-filter and MeshQualityNormalisedVolumes

commit db874250fbf6ec6d1098003f59d418607e7150e6
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Mar 15 16:41:31 2011 +0100

    Fix project name

commit 47dd64b3ad355f60fac4e22c646007e06a4d7af9
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Mar 15 16:25:29 2011 +0100

    Added CMake config files

commit b31e8202c48b0479b98a0276ded9155ddc222c69
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Mar 15 16:24:07 2011 +0100

    Deleted obsolete FEM.cmake

commit 33072028d11d25400584418d2f9d8f3067d7f355
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Mar 15 15:11:02 2011 +0100

    Deleted obsolete Options.cmake

commit 243cec1ea3da47419cfc00d4cb63b4762e0d662c
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Mar 15 13:54:18 2011 +0100

    Finished FindMKL

commit cf834ab090c792bbaa747f39e34d04d9c1c777ee
Merge: 1b38d32 664e0c9
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Mar 15 13:03:23 2011 +0100

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    * 'ff' of 141.65.6.106:ogs_sources:
      Fix FindMKL

commit 664e0c9dc993d3ef3071d03c3c9c770fce216170
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Mar 15 14:02:14 2011 +0100

    Fix FindMKL

commit 257c674dcc35346651373219fa1100b9eb98bfa6
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Mar 15 12:57:41 2011 +0100

    Cleanup of MKL CMake config

commit 1b38d32aa1bdde5a705a8055c2f57f7ced51990a
Merge: 397841c 257c674
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Mar 15 11:59:04 2011 +0100

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    * 'ff' of 141.65.6.106:ogs_sources:
      Cleanup of MKL CMake config

commit 397841c1b5bcd59809382de7b25cd6617b162580
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Mar 15 10:52:43 2011 +0100

    Removed CMake config files

commit 9215a466f7d5c18dbdc95c207ef2add05063aeb7
Merge: a5e9b22 7621049
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Mar 15 10:40:31 2011 +0100

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    * 'ff' of 141.65.6.106:ogs_sources:
      added #include <algorithm> to rf_bc_new .cpp
      substituted in method CBoundaryConditionsGroup::Set the method call CFEMesh::GetNODOnPLY (), that is using the old polyline data structure. The old polyline data structure was (mis)used for interpolation. For this reason the (linear) interpolation is also substituted. Therefore the classes MeshNodesAlongPolylines and LinearInterpolation are used.
      cleaned up code in msh_elem
      temp fix of memory issue at startup

commit a5e9b227c57816a92289de94e4ca4ac63d81145d
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Mar 15 10:40:28 2011 +0100

    Moving FEM config cmake commands to main CMakeLists.txt

commit 8c4409acae6b52076e536ff0824581c48ebff923
Merge: 6b4daea 1243037
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Thu Mar 10 10:47:53 2011 +0100

    Merge branch 'ff' of git@141.65.6.106:ogs_sources into ff

commit 6b4daeae07771d178883755e454f7905589a74a7
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Thu Mar 10 10:47:37 2011 +0100

    substituted in method CBoundaryConditionsGroup::Set the method call
    CFEMesh::GetNODOnPLY (), that is using the old polyline data structure. The old
    polyline data structure was (mis)used for interpolation. For this reason the
    (linear) interpolation is also substituted. Therefore the classes
    MeshNodesAlongPolylines and LinearInterpolation are used.

commit 762104959fa1a2f91c10bdfd7190f3780734a2c4
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Thu Mar 10 09:52:51 2011 +0100

    added #include <algorithm> to rf_bc_new .cpp

commit 1243037e83fb3a16c701cd28a969eb8fa3829e9f
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Thu Mar 10 08:45:04 2011 +0100

    cleaned up code in msh_elem

commit 352729a3aa4b628f29068e892cbd82ac3d74252e
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Wed Mar 9 17:23:54 2011 +0100

    temp fix of memory issue at startup

commit 353dc0c19107f3ecdbae8ae60868208a3d78feca
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Mar 9 09:46:07 2011 +0100

    Screenshot functionality.

    Screenshots are taken with a button on the VisualizationWidget. A magnification factor can be given to save the image in a higher resolution, e.g. for printing.

commit 2e5d603ded5f529fbdc80acb466e8c8c005d1060
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Mar 8 14:32:25 2011 +0100

    colour tables can now be loaded for each scalar array; removal of vtk-objects is fixed

commit 08b7fd63a601de285d0e28802f5dcc7febec16b5
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Mar 8 13:32:28 2011 +0100

    added #ifndef _WIN32 ... #endif

commit 8afef46640ce31b7b7745be83115efa4fddeafa2
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Mar 8 13:31:42 2011 +0100

    removed OS dependent code

commit ce64c1114ca00fcb0549c2c3b9d2c0b26a6d3197
Merge: 2251776 5185ade
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Mar 8 13:10:04 2011 +0100

    Merge branch 'ff' of git@141.65.6.106:ogs_sources into ff

commit 2251776a4cca5bddafba2a6d2a6a387970663a4c
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Mar 8 12:58:31 2011 +0100

    - set default GeoType in GeoInfo to INVALID
    - created command line tool to extract boundary conditions from polyline (setting head using the z-value of the polyline points)
    - enclosed debug info into #ifndef NDEBUG ... #endif

commit 5185adec1027c51c1ff6dcb314984375705f9021
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Tue Mar 8 09:47:20 2011 +0100

    Removed constructgrid from mesh loading in gui ...

commit 1a7add822932857fbc62b4acd9fd3c850ab537f1
Merge: 5e6374e 838167d
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Mar 8 09:37:14 2011 +0100

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    * 'ff' of 141.65.6.106:ogs_sources:
      Testing modifications on ConstructGrid
      Testing modifications on ComputeVolume

commit 5e6374e438107adc639a0cc682b5e55cff8f3fd4
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Tue Mar 8 09:37:10 2011 +0100

    Fixed cell selection on superelevated data objects

commit f39ae17b4abcf582dadf7b0a0cb3c28f3ebf07cd
Merge: 9b8365b 838167d
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Mar 8 07:45:50 2011 +0100

    Merge branch 'ff' of git@141.65.6.106:ogs_sources into ff

commit 9b8365b7a664aad0cf3ebfa9c2a4d4a7a14300fb
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Mar 8 07:45:29 2011 +0100

    - added the possibility to use posix threads in cmake (with the help of Lars)
    - implemented CFEMesh::GetNODOnPnt with threads to accelerate the setting of BCs
    - added class OGSMeshIO in order to write only mesh elements with non-zero volume to the file
    - implemented a base class MeshQualityChecker
    - added mesh quality criterion based on the volume of the elements (class MeshQualityNormalisedVolumes) that inherits from class MeshQualityChecker
    - added mesh quality criterion based on the ration shortest edge / longest edge of a element (class MeshQualityShortestLongestRatio) that inherits from class MeshQualityChecker

commit 838167d1f8bc4572b5fb00dc27b898765ec4c8f6
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Mon Mar 7 16:47:01 2011 +0100

    Testing modifications on ConstructGrid

commit 1b3612c238aadede81677f44bbeb3acbd36ec1e5
Merge: 363fff4 bae5c62
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Mon Mar 7 14:27:18 2011 +0100

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

commit 363fff45c08279f000d5572d1d54bd331776ce0f
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Mon Mar 7 14:26:46 2011 +0100

    Testing modifications on ComputeVolume

commit bae5c625528b8f5d25dcb51399158ab897f87d2a
Merge: 6ff4994 3ea70ae
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Mon Mar 7 14:07:03 2011 +0100

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    * 'ff' of 141.65.6.106:ogs_sources:
      Testing modifications on ConstructGrid
      Testing modifications on ConstructGrid

commit 6ff499493a21f9b1e7602cb132f8ec80986cfc36
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Mon Mar 7 12:28:04 2011 +0100

    Fixed Qt Creator compile issue

commit 9055ecf9fb110333e7d1b731934403fe1831959b
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Mon Mar 7 12:26:50 2011 +0100

    Fixed threshold filter bug.

    Do not call ClearOsg() from outside the vtkOsgActor-class.

commit 3ea70aef4ccf892f80cadb5c86ded8f963f5bccd
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Mon Mar 7 12:21:16 2011 +0100

    Testing modifications on ConstructGrid

commit 42f4f4a5bd8ae43eb8753ea501f1d9388d1bf50e
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Mon Mar 7 10:14:41 2011 +0100

    Testing modifications on ConstructGrid

commit 56e9372b5b892122a9499e5afe21abd9131c16ae
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Fri Mar 4 16:33:29 2011 +0100

    In OpenSG-mode append a vtkTriangleFilter to the vtkTubeFilter to convert triangle strips to ordinary triangles.

commit 714d21db8af0b25c573abec1b91a5d43f720f11b
Merge: 224333e afb212e
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Fri Mar 4 13:07:06 2011 +0100

    Merge branch 'ff' of 141.65.6.106:ogs_sources into ff

    * 'ff' of 141.65.6.106:ogs_sources:
      fixed some compiler warnings
      added missing files
      fixed bug concerning conversion of vtk-meshes to ogs-meshes

commit 224333e83783845c5cd6412901049862c0cd6b13
Merge: 90b5c0e f21205d
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Fri Mar 4 13:04:29 2011 +0100

    Merge commit 'f21205d' into ff

    * commit 'f21205d': (65 commits)
      Moved visualization widget from DataView/ to VtkVis/
      Fixed some cppcheck errors
      Some tooltips added
      Bump version number
      Missing changes
      Added missing files
      Missing git merges.
      Fixed XML-index-mapping issue as well as conditional connect for GeoTreeView
      made an ambiguous call to overloaded function log clear
      added "#include <cmath>" to MeshQualityChecker for log fixed warning in GeoObjectListItem
      Replaced separated geometry-dataviews by a treemodel/view containing all geometry information
      added loading of a matrix from GUI for testing purposes
      implemented criterion: shortest edge/ longest edge for all (currently know - see in MshElemType.h) mesh element types in class MeshQualityChecker
      converting FEM Conditions to new data structures
      added new constructor to TemplatePoint and renamed protected attribute x to _x changed implementation of opertor== from Vector3 some new checks in MeshQualityChecker
      cleaned up code
      some more work on the scalar visualisation of vtk objects + modularisation of code
      1 removed bugs from class ExtractMeshNodes and ExtractSurface 2 changed algorithm to test if a point is in a polygon 3 added test "point in polygon" to google test
      add documentation to GMSHInterface
      changed PointVec::makePntsUnique
      ...

commit f21205de636a748e246d00e26db85280663389fa
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Fri Mar 4 12:59:48 2011 +0100

    Moved visualization widget from DataView/ to VtkVis/

commit afb212e6d50144b2ee11fe120be1ffe2752f39fd
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri Mar 4 12:57:13 2011 +0100

    fixed some compiler warnings

commit 2f2263b376bbd4077ed3c98fd6a69f3b7b414aaa
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri Mar 4 12:28:41 2011 +0100

    added missing files

commit 3d2ed8ccf2be04623da2a7caab374efd5066f990
Author: Karsten Rink <karsten.rink@ufz.de>
Date:   Fri Mar 4 12:27:39 2011 +0100

    fixed bug concerning conversion of vtk-meshes to ogs-meshes

commit 09c273396bf8b67f66a03675fc78f76371bf8ee4
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Fri Mar 4 10:15:59 2011 +0100

    Fixed some cppcheck errors

commit ae49d98e608cca9e36702a9ec5c9bd59b0671e58
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Fri Mar 4 09:37:08 2011 +0100

    Some tooltips added

commit cef38feb9f72ebf70fb02b50a7b354a5b89eba81
Merge: bdee358 6f7e5fa
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Thu Mar 3 07:43:57 2011 +0100

    Merge branch 'ff' of git@141.65.6.106:ogs_sources into ff

commit bdee358d83cd9f3302fe1bad55c89275608143cb
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Thu Mar 3 07:43:51 2011 +0100

    implemented CFEMesh::GetNODOnPoint using pthreads

commit 90b5c0edf1a5003e1e4e88d13cbd56cad6e4eb82
Author: Lars Bilke <lars.bilke@ufz.de>
Date:   Wed Mar 2 17:06:10 2011 +0100

    Added simple cell picking in 3d view.

    Select an vtk object in the vis pipeline and then click on that object in the 3d view to highlight the picked cell.

commit c33860da3f4e1ad26795e9b0f823f7571ef9fb9c
Merge: 389d4ec 8a6959c
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Mar 1 14:07:54 2011 +0100

    Merge branch 'ff' of git@141.65.6.106:ogs_sources into ff

commit 389d4ecf0a01f6c80a30c510d3318fa88584d44e
Merge: 15f7c62 29a5ed6
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Mar 1 13:31:11 2011 +0100

    Merge branch 'ff' of git@141.65.6.106:ogs_sources into ff

commit 15f7c62d1afba2a7aaaccbe576d436ffbcbdaeaf
Author: Thomas Fischer <thomas.fischer@ufz.de>
Date:   Tue Mar 1 13:31:04 2011 +0100

    add a more useful error message to XMLInterface

git-svn-id: https://svn.ufz.de/svn/ogs/trunk/sources@9443 3895a583-e809-0410-9bb6-aa9463026377