diff --git a/Tests/Data/TH2M/HM/Confined_Compression/HM_confined_compression_gas.prj b/Tests/Data/TH2M/HM/Confined_Compression/HM_confined_compression_gas.prj new file mode 100644 index 0000000000000000000000000000000000000000..201b048ee2c8ef6e718d3ae7ff909f0cee945d5a --- /dev/null +++ b/Tests/Data/TH2M/HM/Confined_Compression/HM_confined_compression_gas.prj @@ -0,0 +1,526 @@ +<?xml version="1.0" encoding="ISO-8859-1"?> +<OpenGeoSysProject> + <meshes> + <mesh axially_symmetric="false">square_1x1_quad4_1e2.vtu</mesh> + <mesh axially_symmetric="false">geometry_left.vtu</mesh> + <mesh axially_symmetric="false">geometry_right.vtu</mesh> + <mesh axially_symmetric="false">geometry_top.vtu</mesh> + <mesh axially_symmetric="false">geometry_bottom.vtu</mesh> + </meshes> + <processes> + <process> + <name>TH2M</name> + <type>TH2M</type> + <integration_order>2</integration_order> + <constitutive_relation> + <type>LinearElasticIsotropic</type> + <youngs_modulus>E</youngs_modulus> + <poissons_ratio>nu</poissons_ratio> + </constitutive_relation> + + <jacobian_assembler> + <type>CentralDifferences</type> + <component_magnitudes> + 1.0 1.0 1.0 1.0 + 1.0 1.0 1.0 1.0 + 1.0 1.0 1.0 1.0 + 1.0 1.0 1.0 1.0 + 1.0 1.0 1.0 1.0 + </component_magnitudes> + <relative_epsilons> + 1e-03 1e-03 1e-03 1e-03 + 1e-03 1e-03 1e-03 1e-03 + 1e-06 1e-06 1e-06 1e-06 + 1e-08 1e-08 1e-08 1e-08 + 1e-08 1e-08 1e-08 1e-08 + </relative_epsilons> + </jacobian_assembler> + + <reference_temperature>temperature_ic</reference_temperature> + <process_variables> + <gas_pressure>gas_pressure</gas_pressure> + <capillary_pressure>capillary_pressure</capillary_pressure> + <temperature>temperature</temperature> + <displacement>displacement</displacement> + </process_variables> + <secondary_variables> + <secondary_variable internal_name="velocity_gas" output_name="velocity_gas"/> + <secondary_variable internal_name="velocity_liquid" output_name="velocity_liquid"/> + <secondary_variable internal_name="sigma" output_name="sigma"/> + <secondary_variable internal_name="epsilon" output_name="epsilon"/> + <secondary_variable internal_name="liquid_density" output_name="liquid_density"/> + <secondary_variable internal_name="gas_density" output_name="gas_density"/> + <secondary_variable internal_name="porosity" output_name="porosity"/> + <secondary_variable internal_name="saturation" output_name="saturation"/> + </secondary_variables> + <specific_body_force>0 0</specific_body_force> + </process> + </processes> + <media> + <medium id="0"> + <phases> + <phase> + <type>AqueousLiquid</type> + <properties> + <property> + <name>specific_heat_capacity</name> + <type>Constant</type> + <value>0.0</value> + </property> + <property> + <name>thermal_conductivity</name> + <type>Constant</type> + <value>0</value> + </property> + <property> + <name>density</name> + <type>Constant</type> + <value>10</value> + </property> + <property> + <name>thermal_expansivity</name> + <type>Constant</type> + <value>0</value> + </property> + <property> + <name>viscosity</name> + <type>Constant</type> + <value>1</value> + </property> + </properties> + </phase> + <phase> + <type>Gas</type> + <properties> + <property> + <name>specific_heat_capacity</name> + <type>Constant</type> + <value>4280.0</value> + </property> + <property> + <name>molar_mass</name> + <type>Constant</type> + <value>.028949</value> + </property> + <property> + <name>thermal_conductivity</name> + <type>Constant</type> + <value>0.6</value> + </property> + + <property> + <name>density</name> + <type>Linear</type> + <reference_value>1.e-6</reference_value> + <independent_variable> + <variable_name>temperature</variable_name> + <reference_condition>293.15</reference_condition> + <slope>-4.e-6</slope> + </independent_variable> + </property> + + <property> + <name>viscosity</name> + <type>Constant</type> + <value>1.e-9</value> + </property> + + </properties> + </phase> + <phase> + <type>Solid</type> + <properties> + <property> + <name>density</name> + <type>Constant</type> + <value>1.2e-6</value> + </property> + <property> + <name>thermal_conductivity</name> + <type>Constant</type> + <value>1.838</value> + </property> + <property> + <name>specific_heat_capacity</name> + <type>Constant</type> + <value>917.654</value> + </property> + + <property> + <name>thermal_expansivity</name> + <type>Constant</type> + <value>1.5e-5</value> + </property> + </properties> + </phase> + </phases> + <properties> + + <property> + <name>permeability</name> + <type>Constant</type> + <value>1.e-12</value> + </property> + + <property> + <name>biot_coefficient</name> + <type>Constant</type> + <value>1.0</value> + </property> + + <property> + <name>saturation</name> + <type>Constant</type> + <value>0</value> + </property> + + <property> + <name>relative_permeability</name> + <type>Constant</type> + <value>0</value> + </property> + + <property> + <name>relative_permeability_nonwetting_phase</name> + <type>Constant</type> + <value>1</value> + </property> + + <property> + <name>porosity</name> + <type>Constant</type> + <value>0.8</value> + </property> + + </properties> + </medium> + </media> + <time_loop> + <processes> + <process ref="TH2M"> + <nonlinear_solver>basic_newton</nonlinear_solver> + <compensate_non_equilibrium_initial_residuum>false</compensate_non_equilibrium_initial_residuum> + <convergence_criterion> + <type>PerComponentDeltaX</type> + <norm_type>NORM2</norm_type> + <abstols>1e-3 1e-3 1e-5 1e-6 1.e-6</abstols> + </convergence_criterion> + <time_discretization> + <type>BackwardEuler</type> + </time_discretization> + <time_stepping> + <type>FixedTimeStepping</type> + <t_initial>0</t_initial> + <t_end>4000</t_end> + <timesteps> + <pair> + <repeat>40</repeat> + <delta_t>5</delta_t> + </pair> + <pair> + <repeat>1</repeat> + <delta_t>10</delta_t> + </pair> + </timesteps> + </time_stepping> + </process> + </processes> + <output> + <type>VTK</type> + <prefix>HM_confined_compression_gas</prefix> + <timesteps> + <pair> + <repeat>1</repeat> + <each_steps>1</each_steps> + </pair> + <pair> + <repeat>1</repeat> + <each_steps>19</each_steps> + </pair> + <pair> + <repeat>1</repeat> + <each_steps>100</each_steps> + </pair> + <pair> + <repeat>1</repeat> + <each_steps>300</each_steps> + </pair> + </timesteps> + + <variables> + <variable>gas_pressure</variable> + <variable>gas_pressure_interpolated</variable> + <variable>capillary_pressure</variable> + <variable>capillary_pressure_interpolated</variable> + <variable>liquid_pressure_interpolated</variable> + <variable>temperature</variable> + <variable>temperature_interpolated</variable> + <variable>displacement</variable> + <variable>sigma</variable> + <variable>epsilon</variable> + <variable>velocity_gas</variable> + <variable>velocity_liquid</variable> + <variable>liquid_density</variable> + <variable>gas_density</variable> + <variable>porosity</variable> + <variable>saturation</variable> + </variables> + </output> + </time_loop> + <parameters> + <!-- Mechanics --> + <parameter> + <name>E</name> + <type>Constant</type> + <value>1</value> + </parameter> + <parameter> + <name>nu</name> + <type>Constant</type> + <value>.1</value> + </parameter> + <!-- Model parameters --> + <parameter> + <name>displacement0</name> + <type>Constant</type> + <values>0 0</values> + </parameter> + <parameter> + <name>zero</name> + <type>Constant</type> + <value>0</value> + </parameter> + <parameter> + <name>temperature_ic</name> + <type>Constant</type> + <value>293.15</value> + </parameter> + <parameter> + <name>displacementTop</name> + <type>Constant</type> + <value>-0.05</value> + </parameter> + <parameter> + <name>displacementRamp</name> + <type>CurveScaled</type> + <curve>timeRamp</curve> + <parameter>displacementTop</parameter> + </parameter> + </parameters> + + <curves> + <curve> + <name>timeRamp</name> + <coords>0 100 10000</coords> + <values>0 1 1</values> + </curve> + </curves> + + <!-- ## Displacement equation #########################################--> + <process_variables> + <process_variable> + <name>displacement</name> + <components>2</components> + <order>1</order> + <initial_condition>displacement0</initial_condition> + <boundary_conditions> + + <boundary_condition> + <mesh>geometry_top</mesh> + <type>Dirichlet</type> + <component>1</component> + <parameter>displacementRamp</parameter> + </boundary_condition> + + <boundary_condition> + <mesh>geometry_bottom</mesh> + <type>Dirichlet</type> + <component>1</component> + <parameter>zero</parameter> + </boundary_condition> + + <boundary_condition> + <mesh>geometry_right</mesh> + <type>Dirichlet</type> + <component>0</component> + <parameter>zero</parameter> + </boundary_condition> + + <boundary_condition> + <mesh>geometry_left</mesh> + <type>Dirichlet</type> + <component>0</component> + <parameter>zero</parameter> + </boundary_condition> + + </boundary_conditions> + </process_variable> + + <!-- ## Gas pressure equation #############################################--> + <process_variable> + <name>gas_pressure</name> + <components>1</components> + <order>1</order> + <initial_condition>zero</initial_condition> + <boundary_conditions> + + <boundary_condition> + <mesh>geometry_top</mesh> + <type>Dirichlet</type> + <component>0</component> + <parameter>zero</parameter> + </boundary_condition> + + </boundary_conditions> + </process_variable> + + <!-- ## Capillary pressure equation #######################################--> + <process_variable> + <name>capillary_pressure</name> + <components>1</components> + <order>1</order> + <initial_condition>zero</initial_condition> + <boundary_conditions> + + <boundary_condition> + <mesh>square_1x1_quad4_1e2</mesh> + <type>Dirichlet</type> + <component>0</component> + <parameter>zero</parameter> + </boundary_condition> + + </boundary_conditions> + + </process_variable> + + <!-- ## Temperature equation ##############################################--> + <process_variable> + <name>temperature</name> + <components>1</components> + <order>1</order> + <initial_condition>temperature_ic</initial_condition> + <boundary_conditions> + + <boundary_condition> + <mesh>square_1x1_quad4_1e2</mesh> + <type>Dirichlet</type> + <component>0</component> + <parameter>temperature_ic</parameter> + </boundary_condition> + + </boundary_conditions> + <source_terms> + + </source_terms> + </process_variable> + </process_variables> + + <nonlinear_solvers> + <nonlinear_solver> + <name>basic_newton</name> + <type>Newton</type> + <max_iter>20</max_iter> + <linear_solver>general_linear_solver</linear_solver> + </nonlinear_solver> + </nonlinear_solvers> + <linear_solvers> + <linear_solver> + <name>general_linear_solver</name> + <lis>-i bicgstab -p ilu -tol 1e-16 -maxiter 10000</lis> + <eigen> + <solver_type>SparseLU</solver_type> + <scaling>true</scaling> + </eigen> + <petsc> + <prefix>sd</prefix> + <parameters>-sd_ksp_type cg -sd_pc_type bjacobi -sd_ksp_rtol 1e-16 -sd_ksp_max_it 10000</parameters> + </petsc> + </linear_solver> + </linear_solvers> + <test_definition> + <vtkdiff> + <regex>HM_confined_compression_gas_ts_.*.vtu</regex> + <field>gas_pressure_interpolated</field> + <absolute_tolerance>1e-15</absolute_tolerance> + <relative_tolerance>1e-15</relative_tolerance> + </vtkdiff> + <vtkdiff> + <regex>HM_confined_compression_gas_ts_.*.vtu</regex> + <field>capillary_pressure_interpolated</field> + <absolute_tolerance>1e-15</absolute_tolerance> + <relative_tolerance>1e-15</relative_tolerance> + </vtkdiff> + <vtkdiff> + <regex>HM_confined_compression_gas_ts_.*.vtu</regex> + <field>temperature</field> + <absolute_tolerance>1e-15</absolute_tolerance> + <relative_tolerance>1e-15</relative_tolerance> + </vtkdiff> + <vtkdiff> + <regex>HM_confined_compression_gas_ts_.*.vtu</regex> + <field>displacement</field> + <absolute_tolerance>1e-15</absolute_tolerance> + <relative_tolerance>1e-15</relative_tolerance> + </vtkdiff> + <vtkdiff> + <regex>HM_confined_compression_gas_ts_.*.vtu</regex> + <field>sigma</field> + <absolute_tolerance>1e-15</absolute_tolerance> + <relative_tolerance>1e-15</relative_tolerance> + </vtkdiff> + <vtkdiff> + <regex>HM_confined_compression_gas_ts_.*.vtu</regex> + <field>epsilon</field> + <absolute_tolerance>1e-15</absolute_tolerance> + <relative_tolerance>1e-15</relative_tolerance> + </vtkdiff> + <vtkdiff> + <regex>HM_confined_compression_gas_ts_.*.vtu</regex> + <field>velocity_gas</field> + <absolute_tolerance>1e-15</absolute_tolerance> + <relative_tolerance>1e-15</relative_tolerance> + </vtkdiff> + <vtkdiff> + <regex>HM_confined_compression_gas_ts_.*.vtu</regex> + <field>velocity_liquid</field> + <absolute_tolerance>1e-15</absolute_tolerance> + <relative_tolerance>1e-15</relative_tolerance> + </vtkdiff> + <vtkdiff> + <regex>HM_confined_compression_gas_ts_.*.vtu</regex> + <field>gas_density</field> + <absolute_tolerance>5e-14</absolute_tolerance> + <relative_tolerance>1e-15</relative_tolerance> + </vtkdiff> + <vtkdiff> + <regex>HM_confined_compression_gas_ts_.*.vtu</regex> + <field>liquid_density</field> + <absolute_tolerance>2e-14</absolute_tolerance> + <relative_tolerance>1e-15</relative_tolerance> + </vtkdiff> + <vtkdiff> + <regex>HM_confined_compression_gas_ts_.*.vtu</regex> + <field>porosity</field> + <absolute_tolerance>1e-15</absolute_tolerance> + <relative_tolerance>1e-15</relative_tolerance> + </vtkdiff> + <vtkdiff> + <regex>HM_confined_compression_gas_ts_.*.vtu</regex> + <field>saturation</field> + <absolute_tolerance>2e-15</absolute_tolerance> + <relative_tolerance>1e-15</relative_tolerance> + </vtkdiff> + <vtkdiff> + <regex>HM_confined_compression_gas_ts_.*.vtu</regex> + <field>HydraulicFlow</field> + <absolute_tolerance>1e-15</absolute_tolerance> + <relative_tolerance>1e-15</relative_tolerance> + </vtkdiff> + <vtkdiff> + <regex>HM_confined_compression_gas_ts_.*.vtu</regex> + <field>NodalForces</field> + <absolute_tolerance>1e-15</absolute_tolerance> + <relative_tolerance>1e-15</relative_tolerance> + </vtkdiff> + </test_definition> +</OpenGeoSysProject> diff --git a/Tests/Data/TH2M/HM/Confined_Compression/HM_confined_compression_gas_ts_0_t_0.000000.vtu b/Tests/Data/TH2M/HM/Confined_Compression/HM_confined_compression_gas_ts_0_t_0.000000.vtu new file mode 100644 index 0000000000000000000000000000000000000000..e510545b711a5d5e1741c2940e4c46a7e815099c --- /dev/null +++ b/Tests/Data/TH2M/HM/Confined_Compression/HM_confined_compression_gas_ts_0_t_0.000000.vtu @@ -0,0 +1,46 @@ +<?xml version="1.0"?> +<VTKFile type="UnstructuredGrid" version="1.0" byte_order="LittleEndian" header_type="UInt64" compressor="vtkZLibDataCompressor"> + <UnstructuredGrid> + <FieldData> + <DataArray type="Int8" Name="OGS_VERSION" NumberOfTuples="20" format="appended" RangeMin="45" RangeMax="103" offset="0" /> + </FieldData> + <Piece NumberOfPoints="121" NumberOfCells="100" > + <PointData> + <DataArray type="Float64" Name="HydraulicFlow" format="appended" RangeMin="0" RangeMax="0" offset="84" /> + <DataArray type="Float64" Name="NodalForces" NumberOfComponents="2" format="appended" RangeMin="0" RangeMax="0" offset="152" /> + <DataArray type="UInt64" Name="bulk_node_ids" format="appended" RangeMin="0" RangeMax="120" offset="228" /> + <DataArray type="Float64" Name="capillary_pressure" format="appended" RangeMin="0" RangeMax="0" offset="540" /> + <DataArray type="Float64" Name="capillary_pressure_interpolated" format="appended" RangeMin="0" RangeMax="0" offset="608" /> + <DataArray type="Float64" Name="displacement" NumberOfComponents="2" format="appended" RangeMin="0" RangeMax="0" offset="676" /> + <DataArray type="Float64" Name="epsilon" NumberOfComponents="4" format="appended" RangeMin="0" RangeMax="0" offset="752" /> + <DataArray type="Float64" Name="gas_density" format="appended" RangeMin="1e-06" RangeMax="1e-06" offset="828" /> + <DataArray type="Float64" Name="gas_pressure" format="appended" RangeMin="0" RangeMax="0" offset="928" /> + <DataArray type="Float64" Name="gas_pressure_interpolated" format="appended" RangeMin="0" RangeMax="0" offset="996" /> + <DataArray type="Float64" Name="liquid_density" format="appended" RangeMin="10" RangeMax="10" offset="1064" /> + <DataArray type="Float64" Name="liquid_pressure_interpolated" format="appended" RangeMin="0" RangeMax="0" offset="1156" /> + <DataArray type="Float64" Name="porosity" format="appended" RangeMin="0.8" RangeMax="0.8" offset="1224" /> + <DataArray type="Float64" Name="saturation" format="appended" RangeMin="0" RangeMax="0" offset="1320" /> + <DataArray type="Float64" Name="sigma" NumberOfComponents="4" format="appended" RangeMin="0" RangeMax="0" offset="1388" /> + <DataArray type="Float64" Name="temperature" format="appended" RangeMin="293.15" RangeMax="293.15" offset="1464" /> + <DataArray type="Float64" Name="temperature_interpolated" format="appended" RangeMin="293.15" RangeMax="293.15" offset="1540" /> + <DataArray type="Float64" Name="velocity_gas" NumberOfComponents="2" format="appended" RangeMin="0" RangeMax="0" offset="1616" /> + <DataArray type="Float64" Name="velocity_liquid" NumberOfComponents="2" format="appended" RangeMin="0" RangeMax="0" offset="1692" /> + </PointData> + <CellData> + <DataArray type="UInt64" Name="bulk_element_ids" format="appended" RangeMin="0" RangeMax="99" offset="1768" /> + <DataArray type="Float64" Name="saturation_avg" format="appended" RangeMin="0" RangeMax="0" offset="2048" /> + </CellData> + <Points> + <DataArray type="Float64" Name="Points" NumberOfComponents="3" format="appended" RangeMin="0" RangeMax="1.4142135624" offset="2116" /> + </Points> + <Cells> + <DataArray type="Int64" Name="connectivity" format="appended" RangeMin="" RangeMax="" offset="2652" /> + <DataArray type="Int64" Name="offsets" format="appended" RangeMin="" RangeMax="" offset="3376" /> + <DataArray type="UInt8" Name="types" format="appended" RangeMin="" RangeMax="" offset="3684" /> + </Cells> + </Piece> + </UnstructuredGrid> + <AppendedData encoding="base64"> + 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+ </AppendedData> +</VTKFile> diff --git a/Tests/Data/TH2M/HM/Confined_Compression/HM_confined_compression_liquid.prj b/Tests/Data/TH2M/HM/Confined_Compression/HM_confined_compression_liquid.prj new file mode 100644 index 0000000000000000000000000000000000000000..4ee3208182415882134173140786508161d65125 --- /dev/null +++ b/Tests/Data/TH2M/HM/Confined_Compression/HM_confined_compression_liquid.prj @@ -0,0 +1,533 @@ +<?xml version="1.0" encoding="ISO-8859-1"?> +<OpenGeoSysProject> + <meshes> + <mesh axially_symmetric="false">square_1x1_quad4_1e2.vtu</mesh> + <mesh axially_symmetric="false">geometry_left.vtu</mesh> + <mesh axially_symmetric="false">geometry_right.vtu</mesh> + <mesh axially_symmetric="false">geometry_top.vtu</mesh> + <mesh axially_symmetric="false">geometry_bottom.vtu</mesh> + </meshes> + <processes> + <process> + <name>TH2M</name> + <type>TH2M</type> + <integration_order>2</integration_order> + <constitutive_relation> + <type>LinearElasticIsotropic</type> + <youngs_modulus>E</youngs_modulus> + <poissons_ratio>nu</poissons_ratio> + </constitutive_relation> + + <jacobian_assembler> + <type>CentralDifferences</type> + <component_magnitudes> + 1.0 1.0 1.0 1.0 + 1.0 1.0 1.0 1.0 + 1.0 1.0 1.0 1.0 + 1.0 1.0 1.0 1.0 + 1.0 1.0 1.0 1.0 + </component_magnitudes> + <relative_epsilons> + 1e-03 1e-03 1e-03 1e-03 + 1e-03 1e-03 1e-03 1e-03 + 1e-06 1e-06 1e-06 1e-06 + 1e-08 1e-08 1e-08 1e-08 + 1e-08 1e-08 1e-08 1e-08 + </relative_epsilons> + </jacobian_assembler> + + <reference_temperature>temperature_ic</reference_temperature> + <process_variables> + <gas_pressure>gas_pressure</gas_pressure> + <capillary_pressure>capillary_pressure</capillary_pressure> + <temperature>temperature</temperature> + <displacement>displacement</displacement> + </process_variables> + <secondary_variables> + <secondary_variable internal_name="velocity_gas" output_name="velocity_gas"/> + <secondary_variable internal_name="velocity_liquid" output_name="velocity_liquid"/> + <secondary_variable internal_name="sigma" output_name="sigma"/> + <secondary_variable internal_name="epsilon" output_name="epsilon"/> + <secondary_variable internal_name="liquid_density" output_name="liquid_density"/> + <secondary_variable internal_name="gas_density" output_name="gas_density"/> + <secondary_variable internal_name="porosity" output_name="porosity"/> + <secondary_variable internal_name="saturation" output_name="saturation"/> + </secondary_variables> + <specific_body_force>0 0</specific_body_force> + </process> + </processes> + <media> + <medium id="0"> + <phases> + <phase> + <type>Gas</type> + <properties> + <property> + <name>specific_heat_capacity</name> + <type>Constant</type> + <value>0.0</value> + </property> + <property> + <name>thermal_conductivity</name> + <type>Constant</type> + <value>0</value> + </property> + <property> + <name>density</name> + <type>Constant</type> + <value>10</value> + </property> + <property> + <name>molar_mass</name> + <type>Constant</type> + <value>1</value> + </property> + + <property> + <name>thermal_expansivity</name> + <type>Constant</type> + <value>0</value> + </property> + <property> + <name>viscosity</name> + <type>Constant</type> + <value>1</value> + </property> + </properties> + </phase> + <phase> + <type>AqueousLiquid</type> + <properties> + <property> + <name>specific_heat_capacity</name> + <type>Constant</type> + <value>4280.0</value> + </property> + <property> + <name>molar_mass</name> + <type>Constant</type> + <value>.028949</value> + </property> + <property> + <name>thermal_conductivity</name> + <type>Constant</type> + <value>0.6</value> + </property> + + <property> + <name>density</name> + <type>Linear</type> + <reference_value>1.e-6</reference_value> + <independent_variable> + <variable_name>temperature</variable_name> + <reference_condition>293.15</reference_condition> + <slope>-4.e-6</slope> + </independent_variable> + </property> + + <property> + <name>viscosity</name> + <type>Constant</type> + <value>1.e-9</value> + </property> + + </properties> + </phase> + <phase> + <type>Solid</type> + <properties> + <property> + <name>density</name> + <type>Constant</type> + <value>1.2e-6</value> + </property> + <property> + <name>thermal_conductivity</name> + <type>Constant</type> + <value>1.838</value> + </property> + <property> + <name>specific_heat_capacity</name> + <type>Constant</type> + <value>917.654</value> + </property> + + <property> + <name>thermal_expansivity</name> + <type>Constant</type> + <value>1.5e-5</value> + </property> + </properties> + </phase> + </phases> + <properties> + + <property> + <name>permeability</name> + <type>Constant</type> + <value>1.e-12</value> + </property> + + <property> + <name>biot_coefficient</name> + <type>Constant</type> + <value>1.0</value> + </property> + + <property> + <name>saturation</name> + <type>Constant</type> + <value>1</value> + </property> + + <property> + <name>relative_permeability</name> + <type>Constant</type> + <value>1</value> + </property> + + <property> + <name>relative_permeability_nonwetting_phase</name> + <type>Constant</type> + <value>0</value> + </property> + + <property> + <name>porosity</name> + <type>Constant</type> + <value>0.8</value> + </property> + + </properties> + </medium> + </media> + <time_loop> + <processes> + <process ref="TH2M"> + <nonlinear_solver>basic_newton</nonlinear_solver> + <compensate_non_equilibrium_initial_residuum>false</compensate_non_equilibrium_initial_residuum> + <convergence_criterion> + <type>PerComponentDeltaX</type> + <norm_type>NORM2</norm_type> + <abstols>1e-3 1e-3 1e-5 1e-6 1.e-6</abstols> + </convergence_criterion> + <time_discretization> + <type>BackwardEuler</type> + </time_discretization> + <time_stepping> + <type>FixedTimeStepping</type> + <t_initial>0</t_initial> + <t_end>4000</t_end> + <timesteps> + <pair> + <repeat>40</repeat> + <delta_t>5</delta_t> + </pair> + <pair> + <repeat>1</repeat> + <delta_t>10</delta_t> + </pair> + </timesteps> + </time_stepping> + </process> + </processes> + <output> + <type>VTK</type> + + <prefix>HM_confined_compression_liquid</prefix> + <timesteps> + <pair> + <repeat>1</repeat> + <each_steps>1</each_steps> + </pair> + <pair> + <repeat>1</repeat> + <each_steps>19</each_steps> + </pair> + <pair> + <repeat>1</repeat> + <each_steps>100</each_steps> + </pair> + <pair> + <repeat>1</repeat> + <each_steps>300</each_steps> + </pair> + </timesteps> + + <variables> + <variable>gas_pressure</variable> + <variable>gas_pressure_interpolated</variable> + <variable>capillary_pressure</variable> + <variable>capillary_pressure_interpolated</variable> + <variable>liquid_pressure_interpolated</variable> + <variable>temperature</variable> + <variable>temperature_interpolated</variable> + <variable>displacement</variable> + <variable>sigma</variable> + <variable>epsilon</variable> + <variable>velocity_gas</variable> + <variable>velocity_liquid</variable> + <variable>liquid_density</variable> + <variable>gas_density</variable> + <variable>porosity</variable> + <variable>saturation</variable> + </variables> + </output> + </time_loop> + <parameters> + <!-- Mechanics --> + <parameter> + <name>E</name> + <type>Constant</type> + <value>1</value> + </parameter> + <parameter> + <name>nu</name> + <type>Constant</type> + <value>.1</value> + </parameter> + <!-- Model parameters --> + <parameter> + <name>displacement0</name> + <type>Constant</type> + <values>0 0</values> + </parameter> + <parameter> + <name>zero</name> + <type>Constant</type> + <value>0</value> + </parameter> + <parameter> + <name>temperature_ic</name> + <type>Constant</type> + <value>293.15</value> + </parameter> + <parameter> + <name>displacementTop</name> + <type>Constant</type> + <value>-0.05</value> + </parameter> + <parameter> + <name>displacementRamp</name> + <type>CurveScaled</type> + <curve>timeRamp</curve> + <parameter>displacementTop</parameter> + </parameter> + </parameters> + + <curves> + <curve> + <name>timeRamp</name> + <coords>0 100 10000</coords> + <values>0 1 1</values> + </curve> + </curves> + + <!-- ## Displacement equation #########################################--> + <process_variables> + <process_variable> + <name>displacement</name> + <components>2</components> + <order>1</order> + <initial_condition>displacement0</initial_condition> + <boundary_conditions> + + <boundary_condition> + <mesh>geometry_top</mesh> + <type>Dirichlet</type> + <component>1</component> + <parameter>displacementRamp</parameter> + </boundary_condition> + + <boundary_condition> + <mesh>geometry_bottom</mesh> + <type>Dirichlet</type> + <component>1</component> + <parameter>zero</parameter> + </boundary_condition> + + <boundary_condition> + <mesh>geometry_right</mesh> + <type>Dirichlet</type> + <component>0</component> + <parameter>zero</parameter> + </boundary_condition> + + <boundary_condition> + <mesh>geometry_left</mesh> + <type>Dirichlet</type> + <component>0</component> + <parameter>zero</parameter> + </boundary_condition> + + </boundary_conditions> + </process_variable> + + <!-- ## Gas pressure equation #############################################--> + <process_variable> + <name>gas_pressure</name> + <components>1</components> + <order>1</order> + <initial_condition>zero</initial_condition> + <boundary_conditions> + + <boundary_condition> + <mesh>square_1x1_quad4_1e2</mesh> + <type>Dirichlet</type> + <component>0</component> + <parameter>zero</parameter> + </boundary_condition> + + </boundary_conditions> + </process_variable> + + <!-- ## Capillary pressure equation #######################################--> + <process_variable> + <name>capillary_pressure</name> + <components>1</components> + <order>1</order> + <initial_condition>zero</initial_condition> + <boundary_conditions> + + <boundary_condition> + <mesh>geometry_top</mesh> + <type>Dirichlet</type> + <component>0</component> + <parameter>zero</parameter> + </boundary_condition> + + </boundary_conditions> + + </process_variable> + + <!-- ## Temperature equation ##############################################--> + <process_variable> + <name>temperature</name> + <components>1</components> + <order>1</order> + <initial_condition>temperature_ic</initial_condition> + <boundary_conditions> + + <boundary_condition> + <mesh>square_1x1_quad4_1e2</mesh> + <type>Dirichlet</type> + <component>0</component> + <parameter>temperature_ic</parameter> + </boundary_condition> + + </boundary_conditions> + <source_terms> + + </source_terms> + </process_variable> + </process_variables> + + <nonlinear_solvers> + <nonlinear_solver> + <name>basic_newton</name> + <type>Newton</type> + <max_iter>20</max_iter> + <linear_solver>general_linear_solver</linear_solver> + </nonlinear_solver> + </nonlinear_solvers> + <linear_solvers> + <linear_solver> + <name>general_linear_solver</name> + <lis>-i bicgstab -p ilu -tol 1e-16 -maxiter 10000</lis> + <eigen> + <solver_type>SparseLU</solver_type> + <scaling>true</scaling> + </eigen> + <petsc> + <prefix>sd</prefix> + <parameters>-sd_ksp_type cg -sd_pc_type bjacobi -sd_ksp_rtol 1e-16 -sd_ksp_max_it 10000</parameters> + </petsc> + </linear_solver> + </linear_solvers> + <test_definition> + <vtkdiff> + <regex>HM_confined_compression_liquid_ts_.*.vtu</regex> + <field>gas_pressure_interpolated</field> + <absolute_tolerance>1e-15</absolute_tolerance> + <relative_tolerance>1e-15</relative_tolerance> + </vtkdiff> + <vtkdiff> + <regex>HM_confined_compression_liquid_ts_.*.vtu</regex> + <field>capillary_pressure_interpolated</field> + <absolute_tolerance>1e-15</absolute_tolerance> + <relative_tolerance>1e-15</relative_tolerance> + </vtkdiff> + <vtkdiff> + <regex>HM_confined_compression_liquid_ts_.*.vtu</regex> + <field>temperature</field> + <absolute_tolerance>1e-15</absolute_tolerance> + <relative_tolerance>1e-15</relative_tolerance> + </vtkdiff> + <vtkdiff> + <regex>HM_confined_compression_liquid_ts_.*.vtu</regex> + <field>displacement</field> + <absolute_tolerance>1e-15</absolute_tolerance> + <relative_tolerance>1e-15</relative_tolerance> + </vtkdiff> + <vtkdiff> + <regex>HM_confined_compression_liquid_ts_.*.vtu</regex> + <field>sigma</field> + <absolute_tolerance>1e-15</absolute_tolerance> + <relative_tolerance>1e-15</relative_tolerance> + </vtkdiff> + <vtkdiff> + <regex>HM_confined_compression_liquid_ts_.*.vtu</regex> + <field>epsilon</field> + <absolute_tolerance>1e-15</absolute_tolerance> + <relative_tolerance>1e-15</relative_tolerance> + </vtkdiff> + <vtkdiff> + <regex>HM_confined_compression_liquid_ts_.*.vtu</regex> + <field>velocity_gas</field> + <absolute_tolerance>1e-15</absolute_tolerance> + <relative_tolerance>1e-15</relative_tolerance> + </vtkdiff> + <vtkdiff> + <regex>HM_confined_compression_liquid_ts_.*.vtu</regex> + <field>velocity_liquid</field> + <absolute_tolerance>1e-15</absolute_tolerance> + <relative_tolerance>1e-15</relative_tolerance> + </vtkdiff> + <vtkdiff> + <regex>HM_confined_compression_liquid_ts_.*.vtu</regex> + <field>gas_density</field> + <absolute_tolerance>5e-14</absolute_tolerance> + <relative_tolerance>1e-15</relative_tolerance> + </vtkdiff> + <vtkdiff> + <regex>HM_confined_compression_liquid_ts_.*.vtu</regex> + <field>liquid_density</field> + <absolute_tolerance>2e-14</absolute_tolerance> + <relative_tolerance>1e-15</relative_tolerance> + </vtkdiff> + <vtkdiff> + <regex>HM_confined_compression_liquid_ts_.*.vtu</regex> + <field>porosity</field> + <absolute_tolerance>1e-15</absolute_tolerance> + <relative_tolerance>1e-15</relative_tolerance> + </vtkdiff> + <vtkdiff> + <regex>HM_confined_compression_liquid_ts_.*.vtu</regex> + <field>saturation</field> + <absolute_tolerance>2e-15</absolute_tolerance> + <relative_tolerance>1e-15</relative_tolerance> + </vtkdiff> + <vtkdiff> + <regex>HM_confined_compression_liquid_ts_.*.vtu</regex> + <field>HydraulicFlow</field> + <absolute_tolerance>1e-15</absolute_tolerance> + <relative_tolerance>1e-15</relative_tolerance> + </vtkdiff> + <vtkdiff> + <regex>HM_confined_compression_liquid_ts_.*.vtu</regex> + <field>NodalForces</field> + <absolute_tolerance>1e-15</absolute_tolerance> + <relative_tolerance>1e-15</relative_tolerance> + </vtkdiff> + </test_definition> +</OpenGeoSysProject> diff --git a/Tests/Data/TH2M/HM/Confined_Compression/HM_confined_compression_liquid_ts_0_t_0.000000.vtu b/Tests/Data/TH2M/HM/Confined_Compression/HM_confined_compression_liquid_ts_0_t_0.000000.vtu new file mode 100644 index 0000000000000000000000000000000000000000..25ca868b6a7e65e21f8a074e3475839ee05bed1e --- /dev/null +++ b/Tests/Data/TH2M/HM/Confined_Compression/HM_confined_compression_liquid_ts_0_t_0.000000.vtu @@ -0,0 +1,46 @@ +<?xml version="1.0"?> +<VTKFile type="UnstructuredGrid" version="1.0" byte_order="LittleEndian" header_type="UInt64" compressor="vtkZLibDataCompressor"> + <UnstructuredGrid> + <FieldData> + <DataArray 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