This also allows to remove the _geoObjects member from the ProjectData.

Similar functions used by DE are in the DataHolderLib/Project.

New versions of logog do not have an implicit ; after the macros.

Now at the top level of the project's config.

Find a boundary mesh in the list of meshes instead of using GeoObjects
and pass it to the boundary condition creation.

Dmitri Naumov authored 6 years ago and Dmitri Naumov committed 6 years ago

All named geometries are converted to meshes (with
same names).

These meshes will be used by the boundary conditions
and source term constructors.

xingyuanmiao authored 6 years ago and Dmitri Naumov committed 6 years ago

* added thermomechanicalphasefield process.

* added tests.

* fixed process name.

* deactivated monolithic scheme.

* modified name of Kdd component.

* added ctest.

* modified temperature condition for beam3d model.

* added data for ctest.

* minor correction of process name.

* added thermo-mechanical phase-field process description in doxygen.

* changed test name.

* added documentation for website.

* added slab3d test.

* added process description.

* updated secondary variables output.

* added analytical solution comparison.

* updated sceondary variables output in two large tests.

* updated test.

* reference corrections for doxygen.

* added tags for phasefield and thermal parameters.

* separated different types of parameters in tests.

* [TMPh] Fixed a bug and ran clang-format to the changed file

* renamed the representation of the trace of mechanical strain.

* use resize for eps_prev instead of initialisation.

* removed unused parameters.

* removed commented code.

* removed unnecessary includes.

* renamed sigma_real to sigma.

* updated history_variable using std::max.

* removed unnecessary update for sigma and heatflux.

* added missed temperature variable.

* removed two INFOs for history_variable.

* replaced block with segment.

* removed unused typedef of invariants.

* rearranged the order of includes.

* fixed calculation of density.

* fixed doxygen warnings.

* minor correction on the definition of residual thermal conductivity.

* removed monolithic scheme.

* supplemented correction of density calculation.

* added a mechanical phasefield test to compare with a homogeneous temperature test.

* updated iglu testing to check the heat_flux.

* added thermal shock testing to ctest.

* corrected reference citation.

* minor corrections of the process description.

* updated the process after latest rebasing.

* removed unused parameter history_field.

* added missing .vtu term in thermal shock testing case.

* removed coupling_scheme option --WIP.

* [TMPh] Changed the parsing of variables in order to keep the variable documentations

* adjusted total running time and refined the tolerance of convergence.

* changed format of image display.

* format line 221-248.

* fixed equation display issue.

* changed ctest name.

* changed format.

* [T] TMP: Remove executable flag from test files.

* [T] TMP: Format project files.

* clang-format all source code changes.

Define the cpp definitions for the ProjectData.cpp.
Use a list of processes in the main cmake file.

Clang format run on near-the-header lines.

Happy New Year

- Copied ComponentTransport folder
- Renamed ComponentTransport to RichardsComponentTransport

xingyuanmiao authored 7 years ago and Dmitri Naumov committed 7 years ago

* added phasefield process and test.

* apply clang-format.

* added missing integralMeasure for axisymmetric problem.

* fixed compilation errors after rebasing.

* added unconfined compression ctest.

* added missing reference.

* renamed specialFunction as calculateDegradedStress.

* changed order of stress and strain components.

* deleted unused file.

* changed IntegrationPointData.

* added local results to highlight the deviation.

* returned DeltaXCheck true.

* modified dimension in ProjectData.

* removed second order mesh.

* moved history_variable to pushBackState.

* added absolute error of displacement for beam3d test.

* removed eval() calls in calculation of stress components.

* added description for the calculateDegradedStress function.

* added types available.

* rephrased description.

* removed unused C variable.

* added model description.

* modified types of constitutive relation.

* removed CreateLinearElasticPhaseField.h.

* added a tag for phasefield_parameters.

* added missing phasefield_parameters after PHASE_FIELD.

* removed eval() calls in calculation of tensile stress component.

* moved process description to PhaseFieldProcess.h.

* added description to the undocumented function.

* created missing file in documentation.

* removed two duplicated files in phasefield process.

* removed unused file in documentation.

* removed the call to material_model.integrateStress.

* removed unused variables.

* fixed expression of length scale parameter in documentation.

The DisplacementDim is actually equal to the GlobalDim.
We never have used non-equal mesh dimensions and process
dimensions (e.g. 2d deformations in 3d space)

From llvm documentation https://clang.llvm.org/extra/clang-tidy/checks/misc-string-compare.html
"A common mistake is to use the string’s compare method instead of using the equality or inequality operators. The compare method is intended for sorting functions and thus returns a negative number, a positive number or zero depending on the lexicographical relationship between the strings compared. If an equality or inequality check can suffice, that is recommended. This is recommended to avoid the risk of incorrect interpretation of the return value and to simplify the code. The string equality and inequality operators can also be faster than the compare method due to early termination."

Especially on iterator types and 'new' allocations.

Automatically with sed
sed -i 's/ogs_file_param_attr{process/ogs_file_param_attr{prj__processes__process/g'
and similar to the ogs_file_param_special and the ogs_file_param
doxygen commands.