[ci] Download boost from sourceforge.

See merge request ogs/ogs!4860

- https://github.com/boostorg/boost/issues/849

[cmake] Install GKlib (metis helper library)

See merge request ogs/ogs!4859

[ci] Build container with netcdf.

See merge request ogs/ogs!4858

Vectorized tensor utilities

See merge request ogs/ogs!4856

The deformation gradient and alike quantities are second order tensors
stored as a vector. Convenience operations on these tensors are
collected in the namespace.

The conversion to a Eigen matrix and back are used so far in tests only
for comparisons with Eigen operations.

Disable FPE for reading vtu files

See merge request ogs/ogs!4855

Unsorted small improvements

See merge request ogs/ogs!4854

[cmake] Install mpmetis.

See merge request ogs/ogs!4857

Follow-up on !4773.

[eve] Use modules for petsc and hdf5.

See merge request ogs/ogs!4852

Reading the VTU files can trigger floating point exceptions. Because
we are not debugging VTK (or other libraries) at this point, the
floating point exceptions are temporarily disabled and are restored
at the end of the scope.

should be issued only if the variable is set.

Tom Fischer authored 1 year ago and Dmitry Yu. Naumov committed 1 year ago

It isn't necessary to make a copy of the entire vector.
Instead directly use the first value.

Upgraded PETSc minimum to 3.18.6.

See merge request ogs/ogs!4849

Workarounds for 3.16 can be reverted.
3.16 does not build on recent Arch, make 4.4.1, see

https://gitlab.com/petsc/petsc/-/merge_requests/6140

Update JUWELS module loading using Stage/2024

See merge request ogs/ogs!4838

[ci] Fixes

See merge request ogs/ogs!4845

[cff] Added author orcids

See merge request !4836

This reverts commit 3d057997 which broke
benchmark downloads.

[ci] PETSc pkg-config fixes

See merge request ogs/ogs!4844

[py] Import OpenGeoSys module properly

See merge request !4843

mtest / tfel python bindings are not available on the test machines
and are therefore skipped.

Affects ModCamClay_TestIsotrop.ipynb.

Needs to be imported with:

try:
    import ogs.callbacks as OpenGeoSys
except ModuleNotFoundError:
    import OpenGeoSys

`ogs.callbacks` is needed when imported via pip installed package.
`import OpenGeoSys` else.