* gnu/packages/wm.scm (xmonad): Update to 0.12.
[source](snippet, modules): Remove.
[inputs]: Add GHC-SETLOCALE and GHC-QUICKCHECK.
(ghc-xmonad-contrib): Update to 0.12.

* gnu/packages/haskell.scm (ghc-setlocale): New variable.

* gnu/packages/gcal.scm (gcal): Update to 4.1.
[home-page]: Use https.

* gnu/packages/patches/libtiff-CVE-2017-5225.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image.scm (libtiff/fixed)[source]: Use it.

* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.7-5.

* gnu/services/cuirass.scm (<cuirass-configuration>): Add port field.
(cuirass-shepherd-service): Honor it.
* doc/guix.texi (Continuous Integration): Document it.

Signed-off-by: Mathieu Lirzin <mthl@gnu.org>

* gnu/packages/freedesktop.scm (libinput): Update to 1.6.0.

* gnu/packages/qemu.scm (qemu)[source]: Add patches.
* gnu/packages/patches/qemu-CVE-2016-10155.patch,
gnu/packages/patches/qemu-CVE-2017-5552.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.

Fixes <https://bugs.gnu.org/25467>.

* gnu/packages/shells.scm (fish)[arguments]: Rename phase "patch-bc" to
"embed-store-paths"; embed full path to Python.

* gnu/packages/sdl.scm (guile-sdl2): New variable.

* gnu/packages/python.scm (python2-slowaes): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>

* gnu/packages/python.scm (python-qrcode, python2-qrcode): New variables.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>

* gnu/packages/python.scm (python-pbkdf2, python2-pbkdf2): New variables.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>

The previous version, 2.32, is not available for download anymore.

* gnu/packages/perl.scm (perl-term-readkey): Update to 2.37.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>

* gnu/packages/games.scm (red-eclipse): Update to 1.5.8.

* gnu/packages/games.scm (tintin++): Update to 2.01.2.

* guix/scripts/lint.scm (run-checkers): Remove 'name' variable.  Display
PACKAGE@VERSION instead of PACKAGE-VERSION.

* gnu/packages/compton.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add compton.scm

Signed-off-by: Ludovic Courtès <ludo@gnu.org>

* gnu/packages/geo.scm (geos): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>

* gnu/packages/popt.scm (gflags): Update to 2.2.0.
[source]: Use tarball release.

* gnu/packages/bioinformatics.scm (r-vegan): Update to 2.4-2.

* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.34.

* gnu/packages/linux.scm (%linux-libre-version, %linux-libre-hash)
(linux-libre): Update to 4.9.5.

* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.44.

* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.38.

Suggested by Chris Webber.

* gnu/packages/tls.scm (gnutls/guile-2.2): New variable.

This fixes indentation of 'match' forms.

* gnu/services/vpn.scm: Pass through 'indent-code.el'.

* etc/indent-code.el.in (guix-syntax--scheme-indent): New macro.
Use it.

* gnu/packages/fcitx.scm (fcitx-configtool): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>

* gnu/packages/datamash.scm (datamash): Update to 1.1.1.

This is a followup to 3f0603ea.

* gnu/packages/gd.scm (gd-2.2.4)[source]: Fix URL.

'CHANGELOG.md' in the development repository lists several fixed bugs with
potential security implications:

https://github.com/libgd/libgd/blob/gd-2.2.4/CHANGELOG.md

* gnu/packages/gd.scm (gd)[replacement]: New field.
(gd-2.2.4): New variable.

* gnu/packages/bioinformatics.scm (r-msnid)[description]: Expand "MS/MS"
to "tandem mass spectrometry".

* gnu/packages/bioinformatics.scm (r-msnbase)[description]: Expand "MS"
to "mass spectrometry".

* gnu/packages/statistics.scm (r-fastica): New variable.

* gnu/packages/statistics.scm (r-lars): New variable.

* gnu/packages/statistics.scm (r-mixtools): New variable.

* gnu/packages/statistics.scm (r-cowplot): New variable.

* gnu/services/network-manager.scm (<network-manager-configuration>): New
record type.
(network-manager-shpeherd-service): Change to use the
network-manager-configuration record, rather than a package.  Generate a
simple configuration file from the network-manager-configuration record.
(network-manager-service-type): Update extensions to take the
network-manager-configuration rather than a package.
(network-manager-service): Remove function, the network-manager-service-type
can be used instead, and this avoids keeping the function signature and value
coresponding to the service type in sync.
* doc/guix.texi (Networking Services): Remove documentation for the removed
network-manager-service procedure, and add documentation of the
network-manager-service-type variable and network-manager-configuration
record.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>

* gnu/packages/video.scm (obs): Update to 17.0.2.
[inputs]: Add alsa-lib, fontconfig, speex.