* gnu/services/base.scm (%do-not-kill-file): Rename to
  "/etc/shepherd/do-not-kill".
* gnu/build/linux-boot.scm (mount-root-file-system): Rename
  "/root/etc/dmd" to "/root/etc/shepherd".

* gnu/services/dmd.scm (dmd-boot-gexp): Use binary from 'shepherd' package.
  (dmd-root-service-type): Use 'shepherd' package.
  (%default-modules): Use (shepherd service) module.
* gnu/services/base.scm (%root-file-system-dmd-service): Use
  'stop-logging' procedure to close shepherd log.

* gnu/packages/freedesktop.scm (elogind)[inputs]: Replace 'dmd' with
  'shepherd'.

* doc/guix.texi (Application Setup)[Emacs Packages]: New subsection.

* gnu/packages/emacs.scm (emacs)[inputs]: Add 'guix-src' input.
  [arguments]: Add 'install-site-start' phase.

Co-authored-by: Alex Kost <alezost@gmail.com>

* gnu/packages/package-management.scm (guix-devel): Update to c3f29bc9.

* gnu/packages/gnome.scm (gtk-vnc): New variable.

Co-authored-by: 宋文武 <iyzsong@gmail.com>

* gnu/packages/video.scm (ffmpeg)[inputs]: Add libvdpau, libx11, mesa.
[arguments]: Add configure-flags '--enable-opengl' '--enable-x11grab'.

* .gitignore: Sort lines.  Use globbing for "*.{eps,pdf,png,tar.xz}"
files.

* daemon.am (nix/libstore/schema.sql.hh, etc/guix-daemon.service)
(etc/guix-daemon.conf): Use $(AM_V_GEN).
* doc.am (doc/os-config-%.texi, .png.eps): Likewise.
* Makefile.am (guix-binary.%.tar.xz, gen-ChangeLog, gen-AUTHORS):
Likewise.
(assert-binaries-available, assert-final-inputs-self-contained)
(assert-no-store-file-names, sync-descriptions): Use $(AM_V_at).

* emacs.am [HAVE_EMACS] (dist_lisp_DATA): Move $(AUTOLOADS) to ...
[HAVE_EMACS] (nodist_lisp_DATA): ... here.
(CLEANFILES) [HAVE_EMACS]: Add $(AUTOLOADS).

* Makefile.am (AM_V_HELP2MAN, AM_V_HELP2MAN_, AM_V_HELP2MAN_0): New
variables.
* doc.am (subcommand-manual-target, doc/guix.1, doc/guix-daemon.1): Use
$(AM_V_HELP2MAN).

* Makefile.am (AM_V_EMACS, AM_V_EMACS_, AM_V_EMACS_0): New variables.
* emacs.am [HAVE_EMACS] ($(AUTOLOADS)): Use $(AM_V_EMACS).

* Makefile.am (AM_V_DOT, AM_V_DOT_, AM_V_DOT_0): New variables.
* doc.am (.dot.png, .dot.pdf, .dot.eps): Use $(AM_V_DOT).

* Makefile.am (AM_V_DL, AM_V_DL_, AM_V_DL_0): New variables.
* gnu-system.am (gnu/packages/bootstrap/x86_64-linux/guile-2.0.9.tar.xz)
(gnu/packages/bootstrap/i686-linux/guile-2.0.9.tar.xz)
(gnu/packages/bootstrap/armhf-linux/guile-2.0.11.tar.xz)
(gnu/packages/bootstrap/mips64el-linux/guile-2.0.9.tar.xz): Use $(AM_V_DL).
* build-aux/download.scm: Print a line break between target and origin.

* guix/packages.scm <package>: Use '@' in record printer.
* guix/import/cabal.scm <cabal-package>: Likewise
* guix/import/elpa.scm <elpa-package>: Likewise.
* tests/packages.scm: Adapt to it.

* guix/scripts/lint.scm (check-patch-file-names): Improve clarity by
reversing the logic.

* guix/scripts/lint.scm (check-patch-file-names): Don't check if patches
start with the package full name since matching the package name (which
is a prefix of the full name) is sufficient.

* guix/tests/lint.scm ("patches: file names", "patches: not found"): Use
'dummy-origin'.  'sha256' field was wrongly set to a string instead of a
bytevector.

Fixes CVE-2015-{7575, 8126, 8472} and CVE-2016-{0402, 0448, 0466, 0483,
0494}.

* gnu/packages/java.scm (icedtea-7): Update to 2.6.4.

Fixes CVE-2015-{8126, 8472} and CVE-2016-{0402, 0448, 0466, 0483, 0494}.

* gnu/packages/java.scm (icedtea-6): Update to 1.13.10.

* gnu/packages/admin.scm (shepherd): Update to 0.3.

* gnu/packages/patches/icecat-CVE-2016-1930-pt01.patch,
  gnu/packages/patches/icecat-CVE-2016-1930-pt02.patch,
  gnu/packages/patches/icecat-CVE-2016-1930-pt03.patch,
  gnu/packages/patches/icecat-CVE-2016-1930-pt04.patch,
  gnu/packages/patches/icecat-CVE-2016-1930-pt05.patch,
  gnu/packages/patches/icecat-CVE-2016-1930-pt06.patch,
  gnu/packages/patches/icecat-CVE-2016-1930-pt07.patch,
  gnu/packages/patches/icecat-CVE-2016-1930-pt08.patch,
  gnu/packages/patches/icecat-CVE-2016-1930-pt09.patch,
  gnu/packages/patches/icecat-CVE-2016-1930-pt10.patch,
  gnu/packages/patches/icecat-CVE-2016-1930-pt11.patch,
  gnu/packages/patches/icecat-CVE-2016-1930-pt12.patch,
  gnu/packages/patches/icecat-CVE-2016-1930-pt13.patch,
  gnu/packages/patches/icecat-CVE-2016-1930-pt14.patch,
  gnu/packages/patches/icecat-CVE-2016-1930-pt15.patch,
  gnu/packages/patches/icecat-CVE-2016-1935.patch,
  gnu/packages/patches/icecat-bug-1146335-pt1.patch,
  gnu/packages/patches/icecat-bug-1146335-pt2.patch,
  gnu/packages/patches/icecat-limit-max-buffers-size-for-ANGLE.patch: New
  files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/gnuzilla.scm (icecat)[source]: Add patches.

* gnu/services/base.scm (guix-service-type): Extend
PROFILE-SERVICE-TYPE.
* gnu/system.scm (%base-packages): Remove GUIX.

* gnu/services/dmd.scm (dmd-root-service-type): Extend
PROFILE-SERVICE-TYPE.
* gnu/system.scm (%base-packages): Remove dmd.

* gnu/packages/admin.scm (shepherd): New variable.

* gnu/packages/ruby.scm (ruby-http-cookie): New variable.

* gnu/packages/ruby.scm (ruby-domain-name): New variable.

* gnu/packages/ruby.scm (ruby-unf): New variable.

* gnu/packages/ruby.scm (ruby-shoulda): New variable.

* gnu/packages/ruby.scm (ruby-shoulda-matchers-2): New variable.

* gnu/packages/ruby.scm (ruby-shoulda-matchers): New variable.

* gnu/packages/ruby.scm (ruby-shoulda-context): New variable.

* gnu/packages/ruby.scm (ruby-sqlite3): New variable.

* gnu/packages/ruby.scm (ruby-mime-types): New variable.

* gnu/packages/ruby.scm (ruby-fivemat): New variable.

* gnu/packages/ruby.scm (ruby-mime-types-data): New variable.

* gnu/packages/ruby.scm (ruby-minitest-rg): New variable.

* gnu/packages/ruby.scm (ruby-minitest-bonus-assertions): New variable.