wip some ideas and snippets

xml/createMediaTree.py

+#!/bin/python
+
+import sys
+import subprocess
+
+def addMedia(input, out):
+    xml_path = "//OpenGeoSysProject/time_loop"
+    ex = "xmlstarlet ed --insert " + xml_path + " --type elem -n media " + input
+    process = subprocess.Popen(ex.split(), stdout=subprocess.PIPE)
+    output_stream, errors = process.communicate()
+    output = output_stream.decode()
+    outfile = open(out, 'w')
+    outfile.write(output)
+
+def addMedium(input, out, medium_id):
+    xml_path = "//OpenGeoSysProject/media"
+    xml_medium_node = "medium_" + str(medium_id)
+    ex = "xmlstarlet ed --subnode " + xml_path + " --type elem -n " + xml_medium_node + " " + input
+    process = subprocess.Popen(ex.split(), stdout=subprocess.PIPE)
+    output_stream, errors = process.communicate()
+    output = output_stream.decode()
+    outfile = open('/tmp/' + xml_medium_node + '_t1.prj', 'w')
+    outfile.write(output)
+
+    xml_medium = xml_path + "/" + xml_medium_node
+    ex = "xmlstarlet ed --subnode " + xml_medium + " --type attr -n id -v " + str(medium_id) + " /tmp/" + xml_medium_node + "_t1.prj"
+    process = subprocess.Popen(ex.split(), stdout=subprocess.PIPE)
+    output_stream, errors = process.communicate()
+    output = output_stream.decode()
+    outfile = open('/tmp/' + xml_medium_node + '_t2.prj', 'w')
+    outfile.write(output)
+
+    addPhases('/tmp/' + xml_medium_node + '_t2.prj', '/tmp/' + xml_medium_node + '_t2_phases.prj', xml_medium)
+
+    rename_cmd = "xmlstarlet ed --rename " + xml_medium + " -v medium /tmp/" + xml_medium_node + "_t2_phases.prj"
+    process = subprocess.Popen(rename_cmd.split(), stdout=subprocess.PIPE)
+    output_stream, errors = process.communicate()
+    output = output_stream.decode()
+    outfile = open(out, 'w')
+    outfile.write(output)
+
+def addPhases(input, out, xml_path):
+    ex = "xmlstarlet ed --subnode " + xml_path + " --type elem -n phases " + input
+    process = subprocess.Popen(ex.split(), stdout=subprocess.PIPE)
+    output_stream, errors = process.communicate()
+    output = output_stream.decode()
+    file_name = '/tmp/media_medium_phases.prj'
+    outfile = open(file_name, 'w')
+    outfile.write(output)
+
+    addPhase(file_name, out, 'AqueousLiquid', "//OpenGeoSysProject/media/medium/phases")
+
+def addPhase(input, out, phase, xml_path):
+    ex = "xmlstarlet ed --subnode " + xml_path + " --type elem -n phase " + input
+    process = subprocess.Popen(ex.split(), stdout=subprocess.PIPE)
+    output_stream, errors = process.communicate()
+    output = output_stream.decode()
+    outfile = open(out, 'w')
+    outfile.write(output)
+
+    # phase
+    xml_path = "//OpenGeoSysProject/media/medium/phases/phase"
+    ex = "xmlstarlet ed --subnode " + xml_path + " --type elem -n type -v " + phase + " " + out
+    process = subprocess.Popen(ex.split(), stdout=subprocess.PIPE)
+    output_stream, errors = process.communicate()
+    output = output_stream.decode()
+    outfile = open(out, 'w')
+    outfile.write(output)
+
+def addProperties(input, out, phase):
+    xml_path = "//OpenGeoSysProject/media/medium/phases/phase"
+    ex = "xmlstarlet ed --subnode " + xml_path + " --type elem -n properties " + input
+    process = subprocess.Popen(ex.split(), stdout=subprocess.PIPE)
+    output_stream, errors = process.communicate()
+    output = output_stream.decode()
+    outfile = open(out, 'w')
+    outfile.write(output)
+
+def addMediumProperties(input, out):
+    xml_path = "//OpenGeoSysProject/media/medium"
+    ex = "xmlstarlet ed --subnode " + xml_path + " --type elem -n properties " + input
+    process = subprocess.Popen(ex.split(), stdout=subprocess.PIPE)
+    output_stream, errors = process.communicate()
+    output = output_stream.decode()
+    outfile = open(out, 'w')
+    outfile.write(output)
+
+### create media xml tree
+addMedia(sys.argv[1], '/tmp/media.prj')
+addMedium('/tmp/media.prj', '/tmp/medium_0.prj', 0)
+addMedium('/tmp/medium_0.prj', '/tmp/medium_1.prj', 1)
+exit()
+addPhase('/tmp/phases.prj', '/tmp/phase.prj', 'AqueousLiquid')
+addProperties('/tmp/phase.prj', '/tmp/aqueous_properties.prj', 'AqueousLiquid')
+addMediumProperties('/tmp/aqueous_properties.prj', '/tmp/medium_properties.prj')
+

xml/xmlstarlet_examples.txt

+xmlstarlet sel -t -m "//*[parameter]"  th_decovalex.prj
+xmlstarlet sel -t -c "//*[parameter]"  th_decovalex.prj
+xmlstarlet sel -t -v "//*[parameter]"  th_decovalex.prj
+xmlstarlet sel -t -c "//*[parameter]"  th_decovalex.prj
+xmlstarlet sel -t -c "//*/parameter"  th_decovalex.prj
+xmlstarlet sel -t -c "//*/parameter/name"  th_decovalex.prj
+xmlstarlet sel -t -c "//*/parameter/name[]"  th_decovalex.prj
+xmlstarlet sel -t -c "//*/parameter/name[1]"  th_decovalex.prj
+xmlstarlet sel -t -c "//*/parameter/name[2]"  th_decovalex.prj
+xmlstarlet sel -t -c "//*/parameter/name[text()==mu1]"  th_decovalex.prj
+xmlstarlet sel -t -c "//*/parameter/name[text()=mu1]"  th_decovalex.prj
+xmlstarlet sel -t -c "//*/parameter/name[text()='mu1']"  th_decovalex.prj
+xmlstarlet sel -t -c "//*/parameter/name[text()='mu1'].."  th_decovalex.prj
+xmlstarlet sel -t -c "//*/parameter/name[text()='mu1']/.."  th_decovalex.prj
+xmlstarlet sel -t -c "//*/parameter/name[text()='mu1']/.." -m "*" th_decovalex.prj
+xmlstarlet sel -t -c "//*/parameter/name[text()='mu1']/.." -c "/.." th_decovalex.prj
+xmlstarlet sel -t -m "//*/parameter/name[text()='mu1']/.." -c "/.." th_decovalex.prj
+xmlstarlet sel -t -m "//*/parameter/name[text()='mu1']/.." -c "./.." th_decovalex.prj
+xmlstarlet sel -t -m "//*/parameter/name[text()='mu1']/.." -c "./.." th_decovalex.prj | less
+xmlstarlet sel -t -m "//*/parameter/name[text()='mu1']" -c "./.." th_decovalex.prj | less
+xmlstarlet sel -t -m "//*/parameter/name[text()='mu1']/.." -c "./name" th_decovalex.prj | less
+xmlstarlet sel -t -m "//*/parameter/name[text()='mu1']/.." -v "./name" th_decovalex.prj | less
+xmlstarlet sel -t -m "//*/parameter/name[text()='mu1']/.." -v "./type" th_decovalex.prj | less
+xmlstarlet sel -t -m "//*/parameter/name[text()='mu1']/.." -c "./value" th_decovalex.prj | less
+xmlstarlet sel -t -m "//*/parameter/name[text()='mu1']/.." -c "./value|values" th_decovalex.prj | less
+xmlstarlet sel -t -m "//*/parameter/name[text()='mu1']/.." -m "./type[text()='Constant']" -c "." th_decovalex.prj | less
+xmlstarlet sel -t -m "//*/parameter/name[text()='mu1']/.." -m "./type[text()='Constant']" -c "./.." th_decovalex.prj | less
+xmlstarlet sel -t -m "//*/parameter/name/.." -m "./type[text()='Constant']" -c "./.." th_decovalex.prj | less
+xmlstarlet sel -t -m "//*/parameter/name/.." -m "./type[text()!='Constant']" -c "./.." th_decovalex.prj | less
+xmlstarlet sel -t -m "//*/parameter/name/.." -m "./[type!='Constant']" -c "./.." th_decovalex.prj | less
+xmlstarlet sel -t -m "//*/parameter/name/.." -m "./[value>0]" -c "./.." th_decovalex.prj | less
+xmlstarlet sel -t -m "//*/parameter/name/.." -m ".[value>0]" -c "./.." th_decovalex.prj | less
+xmlstarlet sel -t -m "//*/parameter[value>0]" -c "./.." th_decovalex.prj | less
+xmlstarlet sel -t -m "//*/parameter[value>0]" -c "./" th_decovalex.prj | less
+xmlstarlet sel -t -m "//*/parameter[value>0]" -c "." th_decovalex.prj | less
+xmlstarlet sel -t -m "//*/parameter[name=='mu1']" -c "." th_decovalex.prj | less
+xmlstarlet sel -t -m "//*/parameter[name='mu1']" -c "." th_decovalex.prj | less
+xmlstarlet sel -t -m "//*/parameter[name='mu1' and type='Constant']" -c "." th_decovalex.prj | less
+xmlstarlet sel -t -m "//*/parameter[name='mu1' and type='Constant']" -v "./value" th_decovalex.prj | less
+xmlstarlet sel -t -m "//*/parameter[name='mu1' and type='Constant']" -v "./value|values" th_decovalex.prj | less
+man xmlstarlen
+man xmlstarlet
+xmlstarlet sel -t -m "//*/parameter[name='mu1' and type='Constant']" -v "./value|values" th_decovalex.prj -C| less
+xmlstarlet -C sel -t -m "//*/parameter[name='mu1' and type='Constant']" -v "./value|values" th_decovalex.prj| less
+xmlstarlet sel -C -t -m "//*/parameter[name='mu1' and type='Constant']" -v "./value|values" th_decovalex.prj| less