jupyter.yml

# Built for Sandy Bridge (envinf1) and newer
build jupyter:
  stage: build
  tags: [envinf2-shell]
  needs: [meta]
  extends:
    - .container-maker-setup
  script:
    - docker login -u $CI_REGISTRY_USER -p $CI_REGISTRY_PASSWORD $CI_REGISTRY
    - >
      if [[ "$CI_COMMIT_BRANCH" == "master" ]] ; then
        export DOCKER_TAG_JUPYTER="$CI_REGISTRY/ogs/$CI_PROJECT_NAME/ogs-serial-jupyter:latest"
        export ON_MASTER_ARGS="--upload -C"
      else
        export DOCKER_TAG_JUPYTER="ci-$CI_PROJECT_NAME-$CI_COMMIT_BRANCH-jupyter"
      fi
    # Jupyter container
    - >
      poetry run ogscm compiler.py ogs.py ogs_jupyter.py -B -R --ogs ../..
      --build_args ' --progress=plain'
      --cvode --ccache --mfront
      --cpu-target sandybridge
      --cmake_args ' -DOGS_CPU_ARCHITECTURE=OFF -DOGS_BUILD_TESTING=OFF'
      --runtime_base_image 'jupyter/base-notebook'
      --tag $DOCKER_TAG_JUPYTER
      $ON_MASTER_ARGS
    - cd $CI_PROJECT_DIR
    # execute notebooks in container
    - >
      docker run --rm -v $PWD:/home/jovyan/work --user `id -u $USER` --group-add users
      --workdir /home/jovyan/work $DOCKER_TAG_JUPYTER
      bash -c "find Tests/Notebooks -type f -iname '*.ipynb' -not -path \"*.ipynb_checkpoints*\" | xargs -n1 jupyter nbconvert --execute --inplace"
    - >
      docker run --rm -v $PWD:/home/jovyan/work --user `id -u $USER` --group-add users
      --workdir /home/jovyan/work $DOCKER_TAG_JUPYTER
      bash -c "find Tests/Notebooks -type f -iname '*.ipynb' -not -path \"*.ipynb_checkpoints*\" | xargs -n1 nb2hugo --site-dir web --section docs/benchmarks/notebooks --template Tests/Notebooks/nbconvert_templates/collapsed.md.j2"
  artifacts:
    name: container
    paths:
      - web/content/docs/benchmarks/notebooks
      - web/static/docs/benchmarks/notebooks
      - Tests/Notebooks/**/*.ipynb