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Commit a7517f93 authored by Tom Fischer's avatar Tom Fischer Committed by Dmitri Naumov
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[MeL/IO] Rename for better readability

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......@@ -163,7 +163,7 @@ MeshLib::NodePartitionedMesh* NodePartitionedMeshReader::readMesh(
//----------------------------------------------------------------------------------
// Read Nodes
std::vector<NodeData> nodes(_mesh_info.nodes);
std::vector<NodeData> nodes(_mesh_info.number_of_nodes);
if (!readDataFromFile(fname_header + "nod" + fname_num_p_ext,
static_cast<MPI_Offset>(_mesh_info.offset[2]),
......@@ -176,21 +176,22 @@ MeshLib::NodePartitionedMesh* NodePartitionedMeshReader::readMesh(
//----------------------------------------------------------------------------------
// Read non-ghost elements
std::vector<unsigned long> elem_data(_mesh_info.regular_elements +
std::vector<unsigned long> elem_data(_mesh_info.number_of_regular_elements +
_mesh_info.offset[0]);
if (!readDataFromFile(fname_header + "ele" + fname_num_p_ext,
static_cast<MPI_Offset>(_mesh_info.offset[3]),
MPI_LONG, elem_data))
return nullptr;
std::vector<MeshLib::Element*> mesh_elems(_mesh_info.regular_elements +
_mesh_info.ghost_elements);
std::vector<MeshLib::Element*> mesh_elems(
_mesh_info.number_of_regular_elements +
_mesh_info.number_of_ghost_elements);
setElements(mesh_nodes, elem_data, mesh_elems);
//----------------------------------------------------------------------------------
// Read ghost element
std::vector<unsigned long> ghost_elem_data(_mesh_info.ghost_elements +
_mesh_info.offset[1]);
std::vector<unsigned long> ghost_elem_data(
_mesh_info.number_of_ghost_elements + _mesh_info.offset[1]);
if (!readDataFromFile(fname_header + "ele_g" + fname_num_p_ext,
static_cast<MPI_Offset>(_mesh_info.offset[4]),
......@@ -410,7 +411,7 @@ MeshLib::NodePartitionedMesh* NodePartitionedMeshReader::newMesh(
{
std::vector<std::size_t> gathered_n_regular_base_nodes(_mpi_comm_size);
MPI_Allgather(&_mesh_info.regular_base_nodes,
MPI_Allgather(&_mesh_info.number_of_regular_base_nodes,
1,
MPI_UNSIGNED_LONG,
gathered_n_regular_base_nodes.data(),
......@@ -427,7 +428,8 @@ MeshLib::NodePartitionedMesh* NodePartitionedMeshReader::newMesh(
std::vector<std::size_t> gathered_n_regular_high_order_nodes(
_mpi_comm_size);
std::size_t const n_regular_high_order_nodes =
_mesh_info.regular_nodes - _mesh_info.regular_base_nodes;
_mesh_info.number_of_regular_nodes -
_mesh_info.number_of_regular_base_nodes;
MPI_Allgather(&n_regular_high_order_nodes,
1,
MPI_UNSIGNED_LONG,
......@@ -444,8 +446,9 @@ MeshLib::NodePartitionedMesh* NodePartitionedMeshReader::newMesh(
return new MeshLib::NodePartitionedMesh(
mesh_name, mesh_nodes, glb_node_ids, mesh_elems, properties,
_mesh_info.global_base_nodes, _mesh_info.global_nodes,
_mesh_info.regular_nodes, std::move(n_regular_base_nodes_at_rank),
_mesh_info.number_of_global_base_nodes,
_mesh_info.number_of_global_nodes, _mesh_info.number_of_regular_nodes,
std::move(n_regular_base_nodes_at_rank),
std::move(n_regular_high_order_nodes_at_rank));
}
......@@ -454,8 +457,8 @@ void NodePartitionedMeshReader::setNodes(
std::vector<MeshLib::Node*>& mesh_node,
std::vector<unsigned long>& glb_node_ids) const
{
mesh_node.resize(_mesh_info.nodes);
glb_node_ids.resize(_mesh_info.nodes);
mesh_node.resize(_mesh_info.number_of_nodes);
glb_node_ids.resize(_mesh_info.number_of_nodes);
for (std::size_t i = 0; i < mesh_node.size(); i++)
{
......@@ -471,10 +474,10 @@ void NodePartitionedMeshReader::setElements(
std::vector<MeshLib::Element*>& mesh_elems, const bool ghost) const
{
// Number of elements, either ghost or regular
unsigned long const ne =
ghost ? _mesh_info.ghost_elements : _mesh_info.regular_elements;
unsigned long const ne = ghost ? _mesh_info.number_of_ghost_elements
: _mesh_info.number_of_regular_elements;
unsigned long const id_offset_ghost =
ghost ? _mesh_info.regular_elements : 0;
ghost ? _mesh_info.number_of_regular_elements : 0;
for (unsigned long i = 0; i < ne; i++)
{
......
......@@ -71,27 +71,34 @@ private:
/// A collection of integers that configure the partitioned mesh data.
struct PartitionedMeshInfo
{
unsigned long nodes; ///< 0: Number of all nodes of a partition,
unsigned long base_nodes; ///< 1: Number of nodes for linear
/// elements of a partition,
unsigned long regular_elements; ///< 2: Number of non-ghost elements
/// of a partition,
unsigned long ghost_elements; ///< 3: Number of ghost element of
/// a partition,
unsigned long regular_base_nodes; ///< 4: Number of regular nodes for
unsigned long
number_of_nodes; ///< 0: Number of all nodes of a partition,
unsigned long number_of_base_nodes; ///< 1: Number of nodes for linear
/// elements of a partition,
unsigned long
number_of_regular_elements; ///< 2: Number of non-ghost elements
/// of a partition,
unsigned long
number_of_ghost_elements; ///< 3: Number of ghost element of
/// a partition,
unsigned long
number_of_regular_base_nodes; ///< 4: Number of regular nodes for
/// linear element of a partition,
unsigned long regular_nodes; ///< 5: Number of all regular nodes a
/// partition,
unsigned long global_base_nodes; ///< 6: unused, previously number of
unsigned long
number_of_regular_nodes; ///< 5: Number of all regular nodes a
/// partition,
unsigned long
number_of_global_base_nodes; ///< 6: unused, previously number of
/// nodes for linear element of global
/// mesh,
unsigned long global_nodes; ///< 7: Number of all nodes of global mesh,
unsigned long
number_of_global_nodes; ///< 7: Number of all nodes of global mesh,
unsigned long offset[5]; ///< 8~12: Offsets of positions of partitions
/// in the data arrays.
unsigned long extra_flag; ///< 13: Reserved for extra flag.
std::size_t size() const { return 14; }
unsigned long* data() { return &nodes; }
unsigned long* data() { return &number_of_nodes; }
} _mesh_info;
/*!
......
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