[cmake] Simplify PETSc finding

See merge request !4839

[cmake] Use VTK 9.3 on gcc 13.2.

See merge request !4840

Fixes compile errors in VTK.

This is now recommended. See

https://lists.mcs.anl.gov/pipermail/petsc-users/2019-December/039937.html

FindPETSc.cmake was used.

[cmake] Refactor netCDF library finding

See merge request !4814

Code cleanup: Move code from NumLib to MathLib

See merge request !4833

BHE 1P Benchmark fixes

See merge request ogs/ogs!4834

Also remove scaling of the right error axis
to see the full scale.

Fixing the xpath and the end time with time increments

add the numerical stabilization type "FCT" and apply it to ComponentTransport process

See merge request ogs/ogs!4825

HBShaoUFZ authored 1 year ago and Dmitri Naumov committed 1 year ago

change output prefix

update results

remove LIS and PETSc config

switch on vtkdiff in OgsTest

Dmitri Naumov authored 1 year ago and Dmitri Naumov committed 1 year ago

Directly allocate matrix w/o using the matrix-vector-provider.

HBShaoUFZ authored 1 year ago and Dmitri Naumov committed 1 year ago

fix spelling errors

trim trailing whitespace

fix markdownlint

fix markdownlint

avoid vale false error

fix vale

add limitation

fix vale

fix language issues

break into separate lines

improve benchmark doc

HBShaoUFZ authored 1 year ago and Dmitri Naumov committed 1 year ago

change output prefix

update results

remove LIS and PETSc config

switch on vtkdiff in OgsTest

HBShaoUFZ authored 1 year ago and Dmitri Naumov committed 1 year ago

fixup! calculate D and F in ComponentTransport

remove the pass of D and F matrix

declare and reclaim D and F locally

move FCT feature to a separate function

activate the switch

use the switch built in stabilizer

move to stabilizer

add include

clean not needed lib

clang-format

clang-format

switch off when OGS_USE_PETSC

USE_PETSC

move ifdef to FluxCorrectedTransport class

HBShaoUFZ authored 1 year ago and Dmitri Naumov committed 1 year ago

add FCT function

pass address

add function

bugfix

clang-format

trim trailing whitespace

trim trailing whitespace

switch off when OGS_USE_PETSC defined

switch off when OGS_USE_PETSC

switch off when OGS_USE_PETSC

USE_PETSC

USE_PETSC

USE_PETSC

USE_PETSC

clang-format

move ifdef

fix error msg

clang-format

clang-format

clang-format

fix error

fix error in no_unity setting

fix error in no-unity setting

set maybe_unused

clang-format

[ci] Fixed guix job output directory.

See merge request !4832

Output was missing somehow.

Was part of !4831
and is a partial revert of commit
c5bb42e7

[web] Fix BHE 1P Benchmark

See merge request ogs/ogs!4831