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Commit 1e44cf8b authored by Ben Woodcroft's avatar Ben Woodcroft Committed by Ricardo Wurmus
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gnu: Add OrfM.


* gnu/packages/bioinformatics.scm (orfm): New variable.

Signed-off-by: default avatarRicardo Wurmus <ricardo.wurmus@mdc-berlin.de>
parent 47da6268
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......@@ -1101,6 +1101,27 @@ (define-public miso
that a read originated from a particular isoform.")
(license license:gpl2)))
(define-public orfm
(package
(name "orfm")
(version "0.3.2")
(source (origin
(method url-fetch)
(uri (string-append
"https://github.com/wwood/OrfM/releases/download/v"
version "/orfm-" version ".tar.gz"))
(sha256
(base32
"00jqvlspj9662ni9r4n1snxfnwkzc02i46g5nk1kwjshi6v3vgg3"))))
(build-system gnu-build-system)
(inputs `(("zlib" ,zlib)))
(synopsis "Simple and not slow open reading frame (ORF) caller")
(description
"An ORF caller finds stretches of DNA that when translated are not
interrupted by stop codons. OrfM finds and prints these ORFs.")
(home-page "https://github.com/wwood/OrfM")
(license license:lgpl3+)))
(define-public python2-pbcore
(package
(name "python2-pbcore")
......
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