* guix/inferior.scm (<inferior>)[close]: New field.
(port->inferior): New procedure.
(open-inferior): Rewrite in terms of 'port->inferior'.
(close-inferior): Honor INFERIOR's 'close' field.
(inferior-eval-with-store): Add FIXME comment.
* guix/ssh.scm (remote-inferior): New procedure.

* gnu/packages/parallel.scm (parallel): Update to 20181222.

* gnu/packages/wine.scm (wine-staging-patchset-data): Update to 4.0-rc3.
* gnu/packages/wine.scm (wine-staging): Update to 4.0-rc3.

This is a follow-up to c3949182

* doc/guix.texi (Invoking guix refresh): Fix texinfo markup

* guix/scripts/refresh.scm (refresh-recursive, list-transitive): New
procedures.
(show-help): Document it.
(guix-refresh): Add flags and checks for new options.
* doc/guix.texi (Invoking guix refresh): Document new options.

* gnu/packages/audio.scm (ardour)[inputs]: Sort alphabetically.
[native-inputs]: Same.

* gnu/packages/audio.scm (ardour): [inputs]: add libusb.

* gnu/packages/audio.scm (ardour): [arguments]:
 - Correct comment about --freedesktop flag.
 - Adjust pretty printing for consistency.
 - Add 'install-free-desktop-files phase to actually install the files that
   were build. Fixes bug#33585 reported by baconicsynergy.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>

* gnu/services/messaging.scm (<quassel-configuration>): New record type.
(%quassel-account, %quassel-activation): New procedures.
(quassel-service-type): New variable.
* gnu/tests/messaging.scm (%test-quassel): New variable.
(run-quassel-test): New procedure.
* doc/guix.texi (Messaging): Document quassel service.

* gnu/system/examples/vm-image.tmpl (firmware): New field, explicitly
empty list.

* gnu/packages/patches/file-CVE-2018-10360.patch: New file.
* gnu/packages/file.scm (file)[replacement]: New field.
(file/fixed): New variable.
* gnu/packages/commencement.scm (file-boot0): Use 'package/inherit' to
receive security fixes.
* gnu/local.mk (dist_patch_DATA): Register it.

* guix/scripts/lint.scm (check-github-uri): New procedure.
(%checkers): Add it.
* doc/guix.texi (Invoking guix lint): Document it.
* tests/lint.scm ("github-url", "github-url: one suggestion"): New tests.

The substitute for removing a failing test did no longer work since
the way the test is included changed in v5.45.0: Formerly the test
has listed, now there is a separate statement for this test.

* gnu/package/kde-frameworks.scm((baloo)[arguments]<#phases>: Change
  substitute in phase 'remove-failing-test'.

* gnu/packages/mail.scm (libetpan): Update to 1.9.2.

* gnu/packages/image-processing.scm (vips)[synopsis]: Remove leading article.
[description]: Add punctuation.

* gnu/packages/mail.scm (offlineimap)[home-page]: Use HTTPS.

* gnu/packages/mail.scm (offlineimap): Update to 7.2.2.

* gnu/packages/mail.scm (offlineimap)[source]: Use GIT-FETCH.

* gnu/packages/games.scm (pingus)[home-page]: Use HTTPS and no file name.

* gnu/packages/maths.scm (z3): Update to 4.8.3.
[build-system]: Switch from cmake to make, and use the current
scripts/mk_make.py build script instead of the now-deprecated
contrib/cmake/bootstrap.py.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>

* gnu/packages/conkeror.scm: Remove.
* gnu/local.mk (GNU_SYSTEM_MODULES): Remove it.
* gnu/packages/gnuzilla.scm (conkeror): New variable.

Fixes a regression introduced in
bbe66a53 whereby the actual
load (non-normalized) would be displayed.

* guix/scripts/offload.scm (check-machine-status): Add call to
'normalized-load'.

* gnu/packages/emacs.scm (emacs-guix): Update to 0.5.1.

* gnu/packages/serialization.scm (yaml-cpp)[arguments]: Add a custom
phase to remove installed googletest shared libraries and headers.

* gnu/packages/textutils.scm (opencc)[source]: Add snippet to remove
rapidjson.
[arguments]: Add custom phase to substitute rapidjson.
[native-inputs]: Add rapidjson.

* gnu/packages/textutils.scm (opencc)[source]: Use 'git-fetch'.

* gnu/packages/mail.scm (claws-mail): Update to 3.17.3.

* gnu/packages/mail.scm (claws-mail)[source]: Hard-code name.

* doc/guix.texi (Web Services): Fix typos.

* gnu/services/admin.scm: Fix typo in licence header.

* gnu/packages/datamash.scm (datamash): Update to 1.4.
[source]: Remove patch.
* gnu/packages/patches/datamash-arm-tests.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.

* gnu/packages/web-browsers.scm (sbcl-next)[inputs]: Update for 1.2.0.

* gnu/packages/web-browsers.scm (next-gtk-webkit): Update to 1.2.0.

* gnu/packages/linux.scm (%linux-libre-version): Update to 4.19.12.
(%linux-libre-hash): Update hash.

* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.90.
(%linux-libre-4.14-hash): Update hash.

* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.147.

* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.169.

* gnu/packages/entr.scm (entr)[description]: Fix typo.

* gnu/packages/package-management.scm (guix): Update to bdf860c2.

This should avoid "database is locked" errors when there's a lot of
concurrency, for instance when offloading simultaneously a lot of
builds.

* guix/store/database.scm (call-with-database): Add two 'sqlite-exec'
calls to set 'journal_mode' and 'busy_timeout'.