* gnu/packages/bioinformatics.scm (r-gkmsvm): New variable.

* gnu/packages/statistics.scm (r-rocr): New variable.

* gnu/packages/statistics.scm (r-gplots): New variable.

* gnu/packages/statistics.scm (r-gdata): New variable.

* gnu/packages/bioinformatics.scm (r-seqgl): New variable.

* gnu/packages/bioinformatics.scm (r-chipkernels): New variable.

* gnu/packages/statistics.scm (r-gtools): New variable.

* gnu/packages/machine-learning.scm (r-kernlab): New variable.

* gnu/packages/statistics.scm (r-sfsmisc): New variable.

* gnu/packages/bioinformatics.scm (r-wgcna): New variable.

* gnu/packages/statistics.scm (r-fastcluster): New variable.

* gnu/packages/statistics.scm (r-preprocesscore): New variable.

* gnu/packages/statistics.scm (r-dynamictreecut): New variable.

* gnu/packages/bioinformatics.scm (r-r4rna): New variable.

* gnu/packages/statistics.scm (r-spams): New variable.

* gnu/packages/statistics.scm (r-googlesheets): New variable.

* gnu/packages/statistics.scm (r-cellranger): New variable.

* gnu/packages/statistics.scm (r-rematch): New variable.

* gnu/system/examples/desktop.tmpl: Add gvfs to the system-wide list of
packages.

* gnu/packages/audio.scm (lv2): Update to 1.14.0.

* gnu/packages/music.scm (non-sequencer): Update to 1.9.5-2.a22f33f.

* gnu/packages/ntp.scm (ntp): Update to 4.2.8p9.

* gnu/packages/ntp.scm (ntp): Fix indentation to only use spaces.

* gnu/packages/xorg.scm (editres): New variable.

* gnu/packages/bioinformatics.scm (newick-utils): New variable.

Reported by iyzsong@member.fsf.org (宋文武)
at <https://lists.gnu.org/archive/html/guix-devel/2016-11/msg01045.html>.

* build-aux/build-self.scm (build): Set 'LTDL_LIBRARY_PATH' when
GUILE-SSH has a "0.9." version prefix.

* gnu/packages/image.scm (jasper): Update to 2.0.0.
[build-system]: Switch to cmake-build-system.

* gnu/packages/photo.scm (gphoto2): Update to 2.5.11.

* gnu/packages/photo.scm (libgphoto2): Update to 2.5.11.

* gnu/packages/music.scm (beets): Update to 1.4.1.
[inputs]: Add python2-discogs-client.

* gnu/packages/music.scm (python-discogs-client,
python2-discogs-client): New variables.

* gnu/packages/python.scm (python-rarfile, python2-rarfile): Update to 2.8.
[source]: Remove obsolete patch.
* gnu/packages/patches/python-rarfile-fix-tests.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.

* gnu/packages/python.scm (python-jellyfish, python2-jellyfish): Update to
0.5.6.

* gnu/packages/music.scm (python-pylast, python2-pylast): Update to 1.6.0.

* gnu/packages/music.scm (python-musicbrainzngs, python2-musicbrainzngs): Update
to 0.6.
[arguments]: Disable the test suites.

* gnu/packages/python.scm (python-munkres, python2-munkres): Update to 1.0.8.

* gnu/packages/music.scm (python-mutagen, python2-mutagen): Update to 1.35.1.
[native-inputs]: Add python-pytest.

* gnu/packages/gcc.scm (gcj)[source]: Inherit source from "gcc" package.

* gnu/packages/patches/gcj-arm-mode.patch: Strip directories.

* gnu/packages/mail.scm (notmuch): Update to 0.23.3.
[arguments]: Re-enable previously failing tests.