standardize files references during prj import/export (new MR)

Closes #57, #58, #59, and #62

See merge request !41

    GML, DAT, PY, PRJ includes, VTU files

    References for gml, dat, mesh vtu files that are exported to the prj
    file before simulation are standardized to use absolute path. There
    is an option to copy these files into sim_path; file references are
    then made relative.

    When an ogs6_obj is created from a prj file, the prj file may contain
    references to external files. This makes shure file references (gml,
    meshes, dat, py) have absolute paths. Then it is more easy to handle
    file references when sim_path and prj_path differ.

Resolve "Class to read ogs output in *HDF5* format"

Closes #52

See merge request !34

phit0 authored 3 years ago and Johannes Boog committed 2 years ago

.onLoad checks if rhdf5 is install and installs when allowed by the user.

phit0 authored 3 years ago and Johannes Boog committed 2 years ago

[doc] add missing ogs6_h5 doc

phit0 authored 3 years ago and Johannes Boog committed 2 years ago

[doc] documentation for the updated classes

[doc] documentation for new keywords

[doc] update man of prj_com_prop