Parallel Juwels

This will be part of documentation

5. Profiles

5.1 Use

Alterativly, there are other profiles available

alias arehs='snakemake --profile profiles/developer'

profile	purpose	ogs	ogs tools	glaciationBCs	parallel
profiles/default	Use workflow on local machine	container	container	container	MPI (mpirun)
profiles/developer	Develop workflow on local machine	ogs binaries built on your local machine and on your path	see ogs	glaciationBCS on your PYTHONPATH	MPI (mpirun)
profiles/juwels	Use workflow on HPC cluster	ogs binaries built on your local machine and on your path	container	glaciationBCS on your PYTHONPATH	SLURM (sbatch + srun)
profiles/juwels_interactive	Develop workflow on HPC cluster	ogs binaries built on your local machine and on your path	container	glaciationBCS on your PYTHONPATH	salloc + srun