[base] NAMESPACE, DESCRIPTION and doc cleanup

.gitignore

@@ -3,5 +3,4 @@
 .RData
 .Ruserdata
 packrat/lib*/
-packrat/src/
 inst/doc

DESCRIPTION

@@ -37,6 +37,9 @@ Imports:
     curl,
     xtable,
     dplyr,
-    rlang
+    rlang,
+    doParallel
 RoxygenNote: 7.1.1
 VignetteBuilder: knitr
+Depends: 
+    foreach

NAMESPACE

-# Generated by roxygen2: do not edit by hand
-
-export(OGS6)
-export(OGS6_Chain)
-export(OGS6_Ensemble)
-export(OGS6_UnstructuredGrid)
-export(OGS6_mesh)
-export(generate_benchmark_script)
-export(generate_structured_mesh)
-export(pick_vtu_file)
-export(r2ogs6_borehole_heat_exchanger)
-export(r2ogs6_boundary_condition)
-export(r2ogs6_capillary_pressure)
-export(r2ogs6_chemical_system)
-export(r2ogs6_com_property)
-export(r2ogs6_component)
-export(r2ogs6_convergence_criterion)
-export(r2ogs6_curve)
-export(r2ogs6_deactivated_subdomain)
-export(r2ogs6_eigen)
-export(r2ogs6_flow_and_temperature_control)
-export(r2ogs6_fluid)
-export(r2ogs6_fracture_model)
-export(r2ogs6_fracture_properties)
-export(r2ogs6_global_process_coupling)
-export(r2ogs6_gml)
-export(r2ogs6_insitu)
-export(r2ogs6_jacobian_assembler)
-export(r2ogs6_kinetic_reactant)
-export(r2ogs6_linear_solver)
-export(r2ogs6_local_coordinate_system)
-export(r2ogs6_material_property)
-export(r2ogs6_medium)
-export(r2ogs6_nonlinear_solver)
-export(r2ogs6_output)
-export(r2ogs6_parameter)
-export(r2ogs6_ph_property)
-export(r2ogs6_phase)
-export(r2ogs6_phase_component)
-export(r2ogs6_phasefield_parameters)
-export(r2ogs6_pipes)
-export(r2ogs6_porous_medium)
-export(r2ogs6_pr_property)
-export(r2ogs6_process)
-export(r2ogs6_process_variable)
-export(r2ogs6_rate)
-export(r2ogs6_search_length_algorithm)
-export(r2ogs6_solution)
-export(r2ogs6_source_term)
-export(r2ogs6_time_loop)
-export(r2ogs6_time_stepping)
-export(r2ogs6_tl_process)
-export(r2ogs6_vtkdiff)
-export(read_in_gml)
-export(read_in_prj)
-export(read_in_vtu)
-export(run_simulation)

man/OGS6.Rd

@@ -346,11 +346,18 @@ Adds a r2ogs6_insitu object
 \subsection{Method \code{get_status()}}{
 Checks if the OGS6 object has all necessary parameters for
 starting a simulation
-print_log
 \subsection{Usage}{
-\if{html}{\out{<div class="r">}}\preformatted{OGS6$get_status()}\if{html}{\out{</div>}}
+\if{html}{\out{<div class="r">}}\preformatted{OGS6$get_status(print_status = TRUE)}\if{html}{\out{</div>}}
 }
 
+\subsection{Arguments}{
+\if{html}{\out{<div class="arguments">}}
+\describe{
+\item{\code{print_status}}{flag: Should the status be printed to the console?
+print_log}
+}
+\if{html}{\out{</div>}}
+}
 }
 \if{html}{\out{<hr>}}
 \if{html}{\out{<a id="method-print_log"></a>}}