References for gml, dat, mesh vtu files that are exported to the prj
    file before simulation are standardized to use absolute path. There
    is an option to copy these files into sim_path; file references are
    then made relative.

    When an ogs6_obj is created from a prj file, the prj file may contain
    references to external files. This makes shure file references (gml,
    meshes, dat, py) have absolute paths. Then it is more easy to handle
    file references when sim_path and prj_path differ.

Resolve "Class to read ogs output in *HDF5* format"

Closes #52

See merge request !34

phit0 authored 3 years ago and Johannes Boog committed 2 years ago

.onLoad checks if rhdf5 is install and installs when allowed by the user.

phit0 authored 3 years ago and Johannes Boog committed 2 years ago

[doc] add missing ogs6_h5 doc

phit0 authored 3 years ago and Johannes Boog committed 2 years ago

[doc] documentation for the updated classes

[doc] documentation for new keywords

[doc] update man of prj_com_prop

phit0 authored 3 years ago and Johannes Boog committed 2 years ago

[base] update classes for ogs v6.4.1

[base] added class arguments for new keywords

[test] add test coverage report

Closes #56

See merge request !36

Resolve "Update to OGSv6.4.1"

Closes #51

See merge request !33

Resolve "Accept a list of values in property/value"

See merge request !39

Add CI/CD Pipeline to check if benchmarks work with OGS version 6.4.1

See merge request !37

# Conflicts:
#   .gitlab-ci.yml

[ci] try custom gitlab-runner

[ci] test privileged docker envinf1

[ci] bm-test for v6.4.0

[ci] parallel ref and test benchmark runs

[ci] run benchmark test for version 6.4.1

[ci] final changes

[ci] check if package can be loaded in second stage

[ci] check for singularity

[ci] singularity & go installation

[ci] singularity setup in separate bash script

[ci] test custom container

[ci] 2 stage test custom container

[ci] remove installation of vtk and miniconda as already available in container

[doc] r2ogs6 uptdate protocol in doc/ folder