Lars Bilke authored 10 months ago and Dmitri Naumov committed 10 months ago

Also added <cassert>, former code implicitly used an assert() function
from eigen which was recently renamed to eigen_assert().

Lars Bilke authored 10 months ago and Dmitri Naumov committed 10 months ago

Python should be copied to lib-folder at install time, not at
configure time. file(INSTALL ..) is an alias to file(COPY ...) and
therefore a bit misleading, use install(FILE ...) instead!

Lars Bilke authored 10 months ago and Dmitri Naumov committed 10 months ago

- [cmake] Also use MKLs OpenMP implementation for serial configs.
- [cmake] Renamed OGS_USE_PETSC_MKL_EIGEN_OPENMP to OGS_USE_MKL_EIGEN_OPENMP.
- [cmake] Option OGS_EIGEN_PARALLEL_BACKEND replaces other configs.
  Removed:
  - OGS_USE_MKL_EIGEN_OPENMP
  - OGS_EIGEN_USE_MKL
- Also when OGS_USE_MKL=ON then OGS_EIGEN_PARALLEL_BACKEND defaults to
MKL.
- Updated eigen-unsupported version to inlude fix for MKL backend.
  Fix: https://gitlab.com/libeigen/eigen/-/merge_requests/851
- Moved OGS_EIGEN_PARALLEL_BACKEND initialization.
- [cmake] Only link to OpenMP when eigen backend is set to OpenMP.
- [cmake] Eigen includes OpenMP or MKL depending on backend.

[PL] Pass initial dt to first output computation

See merge request ogs/ogs!4986

[ogs] -m switch: fallback to reading gml from prj-file directory

See merge request ogs/ogs!4997

Follow-up on !4989 and !4996.

When a mesh directory is given with the -m switch, the gml file is also
read from the given mesh directory. This commit adds a fallback to also
reading from the prj-file directory.

Motivation is when using partitioned meshes they often are created in
subdirectories of the project. Before this one had to copy the gml file
into that location too.

Christoph Lehmann authored 10 months ago and Dmitri Naumov committed 10 months ago

Some time-dependent material models are not running with the dt=1 (at
restart) and require "proper" time step sizes.

[partmesh] Create output directory

See merge request ogs/ogs!4996

THM/RM Multi-material restart for MCC-type models

See merge request ogs/ogs!4971

Prints a warning on error, e.g.:

warning: Could not create output directory _out. Error code 17, File exists

Update ruff

See merge request ogs/ogs!4995

Christoph Lehmann authored 10 months ago and Lars Bilke committed 10 months ago

* Added a manual version of ruff auto-fixing all problems. Run it with:

pre-commit run --hook-stage manual

* allow "confusable" en-dash
* updated ruff version (reason: better handling of semicolons in Jupyter
  notebook code cells)

[ctest,ci] Limit output of failed tests to 25 kB

See merge request ogs/ogs!4993

Fix 'AddLayer tool adds wrong elements leading to incorrect mesh'

See merge request ogs/ogs!4994

Relax tolerance in fixed output times / fixed timestepping

See merge request ogs/ogs!4981

The treshold to not to split the timestep is relaxed